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MS022497 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022497
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold720:49037..49417
RNA-Seq ExpressionMS022497
SyntenyMS022497
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594391.1 hypothetical protein SDJN03_10944, partial [Cucurbita argyrosperma subsp. sororia]4.2e-4683.2Show/hide
Query:  MWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCA
        MWLLWWPK  SA  KT+TSSATAAVTATSLA K   SSSHCN +AKLLRKLKKRGRVLCST+GESS+ FQCRYDPLSYSLNFDTSGCGSLLDE YYQFCA
Subjt:  MWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCA

Query:  FSSRFASNPGNASHSVPDVTVTASR
        FSSRFASNPG  S   PD TVTASR
Subjt:  FSSRFASNPGNASHSVPDVTVTASR

KAG7026395.1 hypothetical protein SDJN02_10395, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-4782.81Show/hide
Query:  MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQ
        M QMWLLWWPK  SA  KT+TSSATAAVTATSLA K   SSSHCN +AKLLRKLKKRGRVLCST+GESS+ FQCRYDPLSYSLNFDTSGCGSLLDE YYQ
Subjt:  MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQ

Query:  FCAFSSRFASNPGNASHSVPDVTVTASR
        FCAFSSRFASNPG  S   PD TVTASR
Subjt:  FCAFSSRFASNPGNASHSVPDVTVTASR

XP_022146664.1 uncharacterized protein LOC111015812 [Momordica charantia]3.0e-6098.43Show/hide
Query:  MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQF
        MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKA S SSHCNCVAKLLRKLKKRGRVLCSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQF
Subjt:  MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQF

Query:  CAFSSRFASNPGNASHSVPDVTVTASR
        CAFSSRFASNPGNASHSVPDVTVTASR
Subjt:  CAFSSRFASNPGNASHSVPDVTVTASR

XP_022926526.1 uncharacterized protein LOC111433647 [Cucurbita moschata]1.1e-4682.03Show/hide
Query:  MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQ
        M QMWLLWWPK  SA  KT+TSSATAAVTATSLA K   SSSHCN +AKLLRKLKKRGRVLCST+GESS+ FQCRYDPLSYSLNFDTSGCGSLLDE YYQ
Subjt:  MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQ

Query:  FCAFSSRFASNPGNASHSVPDVTVTASR
        FC FSSRFASNPG  S   PD TVTASR
Subjt:  FCAFSSRFASNPGNASHSVPDVTVTASR

XP_023518962.1 uncharacterized protein LOC111782330 [Cucurbita pepo subsp. pepo]1.1e-4682.03Show/hide
Query:  MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQ
        M QMWLLWWPK  SA  KT+TSSAT AVTATSLA K   SSSHCN +AKLLRKLKKRGRVLCST+GESS+ FQCRYDPLSYSLNFDTSGCGSLLDE YYQ
Subjt:  MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQ

Query:  FCAFSSRFASNPGNASHSVPDVTVTASR
        FCAFSSRFASNPG  S   PD TVTASR
Subjt:  FCAFSSRFASNPGNASHSVPDVTVTASR

TrEMBL top hitse value%identityAlignment
A0A6J1CYQ9 uncharacterized protein LOC1110158121.5e-6098.43Show/hide
Query:  MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQF
        MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKA S SSHCNCVAKLLRKLKKRGRVLCSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQF
Subjt:  MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQF

Query:  CAFSSRFASNPGNASHSVPDVTVTASR
        CAFSSRFASNPGNASHSVPDVTVTASR
Subjt:  CAFSSRFASNPGNASHSVPDVTVTASR

A0A6J1EF60 uncharacterized protein LOC1114336475.4e-4782.03Show/hide
Query:  MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQ
        M QMWLLWWPK  SA  KT+TSSATAAVTATSLA K   SSSHCN +AKLLRKLKKRGRVLCST+GESS+ FQCRYDPLSYSLNFDTSGCGSLLDE YYQ
Subjt:  MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQ

Query:  FCAFSSRFASNPGNASHSVPDVTVTASR
        FC FSSRFASNPG  S   PD TVTASR
Subjt:  FCAFSSRFASNPGNASHSVPDVTVTASR

A0A6J1EFV9 uncharacterized protein LOC1114330121.5e-4179.37Show/hide
Query:  MWLLWWPK-TVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFC
        MWLLWWPK   SA  KT TSS  AAVTATSLA+KA  SSS+CNC AKLLRKLKKR RVL ST+GESS+ FQCRYDPLSYSLNFDTSGCG LLDE YYQ+C
Subjt:  MWLLWWPK-TVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFC

Query:  AFSSRFASNPGNASHSVPDVTVTASR
        AFSSRFASNPGN SHS P  TVT SR
Subjt:  AFSSRFASNPGNASHSVPDVTVTASR

A0A6J1IQV7 uncharacterized protein LOC1114776133.4e-4179.37Show/hide
Query:  MWLLWWPK-TVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFC
        MWLLWWPK   S+G KT TSS  AAVTATSLA+KA  SSS+ NC AKLLRKLKKR RVL ST+GESS+ FQCRYDPLSYSLNFDTSGCG LLDE YYQ+C
Subjt:  MWLLWWPK-TVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQFC

Query:  AFSSRFASNPGNASHSVPDVTVTASR
        AFSSRFASNPGN SHS P VTVT SR
Subjt:  AFSSRFASNPGNASHSVPDVTVTASR

A0A6J1KS95 uncharacterized protein LOC1114971671.3e-4579.69Show/hide
Query:  MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQ
        M QMWLLWWPK  SA  K++T SAT AV+ATSLA K   SSSHCN +AKLLRKLKKRGRVLCST+GESS+ FQCRYDPLSYSLNFDTSGCGSLLDE YYQ
Subjt:  MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSA-FQCRYDPLSYSLNFDTSGCGSLLDEDYYQ

Query:  FCAFSSRFASNPGNASHSVPDVTVTASR
        FCAFSSRFASNPG  S   PD TVTASR
Subjt:  FCAFSSRFASNPGNASHSVPDVTVTASR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G19980.1 unknown protein3.7e-1649.02Show/hide
Query:  AVTATSLAKKAS--SSSSHC--NCVAKLLRKLKKRGRVLCSTS---GESSAFQCRYDPLSYSLNFDTSGCGSLL-DEDYY-QFCAFSSRFASNPGNASHS
        A TAT++ KK++  + + +C   C+A+L+RKLKK+GR+L +TS    + S+ QCRYDP+SYSLNFD   CG+L  DEDYY +F AFSSR+ +   N    
Subjt:  AVTATSLAKKAS--SSSSHC--NCVAKLLRKLKKRGRVLCSTS---GESSAFQCRYDPLSYSLNFDTSGCGSLL-DEDYY-QFCAFSSRFASNPGNASHS

Query:  VP
         P
Subjt:  VP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACAAATGTGGCTTCTCTGGTGGCCGAAGACCGTCTCCGCCGGCGGCAAAACTACCACATCCTCCGCCACCGCCGCGGTAACTGCGACTTCCCTCGCCAAAAAGGC
GTCCTCCTCCTCCTCTCACTGCAACTGCGTCGCCAAACTGTTGCGGAAACTGAAGAAACGAGGGCGAGTTTTATGCAGCACTAGTGGAGAGAGCAGCGCGTTCCAGTGCC
GGTACGATCCGCTGAGCTACTCTCTCAACTTCGACACCAGCGGCTGCGGAAGCTTGTTAGACGAAGATTACTATCAGTTCTGCGCGTTCTCTTCCAGATTCGCGTCAAAT
CCAGGAAATGCTTCTCATTCTGTCCCTGATGTAACAGTCACTGCTTCGCGC
mRNA sequenceShow/hide mRNA sequence
ATGACACAAATGTGGCTTCTCTGGTGGCCGAAGACCGTCTCCGCCGGCGGCAAAACTACCACATCCTCCGCCACCGCCGCGGTAACTGCGACTTCCCTCGCCAAAAAGGC
GTCCTCCTCCTCCTCTCACTGCAACTGCGTCGCCAAACTGTTGCGGAAACTGAAGAAACGAGGGCGAGTTTTATGCAGCACTAGTGGAGAGAGCAGCGCGTTCCAGTGCC
GGTACGATCCGCTGAGCTACTCTCTCAACTTCGACACCAGCGGCTGCGGAAGCTTGTTAGACGAAGATTACTATCAGTTCTGCGCGTTCTCTTCCAGATTCGCGTCAAAT
CCAGGAAATGCTTCTCATTCTGTCCCTGATGTAACAGTCACTGCTTCGCGC
Protein sequenceShow/hide protein sequence
MTQMWLLWWPKTVSAGGKTTTSSATAAVTATSLAKKASSSSSHCNCVAKLLRKLKKRGRVLCSTSGESSAFQCRYDPLSYSLNFDTSGCGSLLDEDYYQFCAFSSRFASN
PGNASHSVPDVTVTASR