CuGenDBv2

Gene ID	MS022506
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transmembrane protein
Genome location	scaffold720:111276..112502
RNA-Seq Expression	MS022506
Synteny	MS022506
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_016899276.1 PREDICTED: uncharacterized protein LOC103484254 [Cucumis melo]

2.7e-80

88.37

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Query:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA
        MSAT+LSYCNPSLACNY RMD KR+ LG +R IGRRNNG+ K TVFAVTEGSAKSSESEETIPSWAK DSEEPPPWA+EE KE G+QQGFQ+PFYVYLLA
Subjt:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA

Query:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGS+FEYVNQKPVFGIINSDSI YAPLLGFFAFTGIPT+AFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL

XP_022146563.1 uncharacterized protein LOC111015749 [Momordica charantia]

2.0e-91

99.42

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Query:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA
        MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAV EGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA
Subjt:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA

Query:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL

XP_023003848.1 uncharacterized protein LOC111497315 [Cucurbita maxima]

1.2e-80

88.37

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Query:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA
        MSAT+LSYCNP LACNYGRM+T+R   G +RPIGRR NGY K TVF+VTEGSAKSSESEETIPSWAKPDSEEPPPWAREE KE GSQ GFQ+PFYVYLLA
Subjt:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA

Query:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGS+FEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPT+ FLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL

XP_023518065.1 uncharacterized protein LOC111781610 [Cucurbita pepo subsp. pepo]

2.5e-81

88.37

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Query:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA
        MSAT+LSYCNP LACNYGRM+T+R   G +RPIGRR+NGY K TVF+VTEGSAKSSESEETIPSWAKPDSEEPPPWAREE KE GSQ GFQ+PFYVYLLA
Subjt:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA

Query:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGS+FEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPT+ FLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL

XP_038881100.1 uncharacterized protein LOC120072709 isoform X2 [Benincasa hispida]

2.5e-81

88.95

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Query:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA
        MSAT+LSYCNPSLACNYGRMD+K +  G +R IG RNNGY K TVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREE KE G+QQGFQ+PFYVYLLA
Subjt:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA

Query:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGS+FEYVNQKPVFGIINSDSI YAPLLGFFAFTGIPT+AFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DTF9 uncharacterized protein LOC103484254

1.3e-80

88.37

Show/hide

Query:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA
        MSAT+LSYCNPSLACNY RMD KR+ LG +R IGRRNNG+ K TVFAVTEGSAKSSESEETIPSWAK DSEEPPPWA+EE KE G+QQGFQ+PFYVYLLA
Subjt:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA

Query:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGS+FEYVNQKPVFGIINSDSI YAPLLGFFAFTGIPT+AFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL

A0A5A7UB84 Uncharacterized protein

1.3e-80

88.37

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Query:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA
        MSAT+LSYCNPSLACNY RMD KR+ LG +R IGRRNNG+ K TVFAVTEGSAKSSESEETIPSWAK DSEEPPPWA+EE KE G+QQGFQ+PFYVYLLA
Subjt:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA

Query:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGS+FEYVNQKPVFGIINSDSI YAPLLGFFAFTGIPT+AFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL

A0A6J1CYX3 uncharacterized protein LOC111015749

9.7e-92

99.42

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Query:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA
        MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAV EGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA
Subjt:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA

Query:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL

A0A6J1IIG9 uncharacterized protein LOC111477793

2.9e-80

88.3

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Query:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA
        MSAT+LSY NPSLACNYG+MDT+RI  G++R IGRRNNG+   TVFA TEGSAKSSESEETIPSWAKPDSEEPPPWAREE KE G+QQGFQ+PFYVYLLA
Subjt:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA

Query:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGY
        SSITAIAAIGS+FEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPT+AFLWFKSVEVANKEAEDQDRRDGY
Subjt:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGY

A0A6J1KQE7 uncharacterized protein LOC111497315

5.9e-81

88.37

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Query:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA
        MSAT+LSYCNP LACNYGRM+T+R   G +RPIGRR NGY K TVF+VTEGSAKSSESEETIPSWAKPDSEEPPPWAREE KE GSQ GFQ+PFYVYLLA
Subjt:  MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLA

Query:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGS+FEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPT+ FLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G51510.1 unknown protein

1.3e-48

59.88

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Query:  CNYGRMDTKRIPLGRVRPIGRRNNGY---------HKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLASSITA
        CN  R  TK  P     P+  R  G+          +  V A TEGS KS ESE   PSWA PDS+EPPPWAR E + + SQ+ F++PF+VYLLAS+ITA
Subjt:  CNYGRMDTKRIPLGRVRPIGRRNNGY---------HKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLASSITA

Query:  IAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL
        IAAIGS+FEY ++ PVFGI+ SDSIFY P+LGFFA TGIPTS FLWFKSVE ANKEA++QD+RDG+L
Subjt:  IAAIGSIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL

Sequences

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CDS sequence

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ATGTCTGCGACAGTGTTGTCTTACTGCAATCCAAGTTTAGCTTGTAATTATGGGAGGATGGATACGAAACGGATTCCATTAGGGCGTGTACGGCCGATTGGAAGGAGAAA
CAATGGCTATCACAAGTTTACTGTGTTTGCCGTTACCGAAGGATCTGCAAAATCGAGCGAGTCCGAAGAAACGATCCCTTCTTGGGCTAAACCTGATTCGGAGGAGCCTC
CTCCTTGGGCAAGGGAAGAAAGCAAGGAAAATGGATCCCAACAGGGATTTCAGCTCCCATTCTACGTTTACCTACTTGCTTCATCTATCACTGCAATTGCCGCTATAGGT
TCTATATTTGAGTACGTCAACCAGAAGCCTGTGTTTGGAATTATAAATTCAGACAGCATATTTTACGCTCCATTGCTTGGATTTTTTGCATTTACTGGCATTCCCACTTC
TGCATTCCTTTGGTTCAAATCTGTCGAAGTTGCTAATAAGGAAGCTGAGGATCAAGACAGAAGAGATGGTTACTTG

mRNA sequence

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Protein sequence

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MSATVLSYCNPSLACNYGRMDTKRIPLGRVRPIGRRNNGYHKFTVFAVTEGSAKSSESEETIPSWAKPDSEEPPPWAREESKENGSQQGFQLPFYVYLLASSITAIAAIG
SIFEYVNQKPVFGIINSDSIFYAPLLGFFAFTGIPTSAFLWFKSVEVANKEAEDQDRRDGYL

MS022506 (gene) of Bitter gourd (TR) v1 genome