; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022515 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022515
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMYB transcription factor
Genome locationscaffold720:218709..219113
RNA-Seq ExpressionMS022515
SyntenyMS022515
Gene Ontology termsNA
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594374.1 Transcription factor MYB61, partial [Cucurbita argyrosperma subsp. sororia]1.0e-5881.48Show/hide
Query:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK
        MGH   C KVKVKRGLWSPEEDEKL+ CIR+  G        WS VPK+AGL RCGKSCRLRWINYLRPDLKRG FSAEEERTI+DVHRILGNRWAQIAK
Subjt:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK

Query:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL
        HLPGRTDNEIKNFWNS IKKKL+A GLDPNTHNLL
Subjt:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL

XP_022146666.1 transcription factor MYB8-like [Momordica charantia]8.4e-7799.26Show/hide
Query:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK
        MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK
Subjt:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK

Query:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL
        HLPGRTDNEIKNFWNSCIKKKL+AQGLDPNTHNLL
Subjt:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL

XP_022926820.1 protein ODORANT1-like [Cucurbita moschata]1.8e-5881.48Show/hide
Query:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK
        MGH   C KVKVKRGLWSPEEDEKL+ CIR+  G        WS VPK+AGL RCGKSCRLRWINYLRPDLKRG FSAEEERTI+DVHRILGNRWAQIAK
Subjt:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK

Query:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL
        HLPGRTDNEIKNFWNS IKKKL+A GLDPNTHNLL
Subjt:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL

XP_023518177.1 transcription factor MYB20-like [Cucurbita pepo subsp. pepo]1.0e-5881.48Show/hide
Query:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK
        MGH   C KVKVKRGLWSPEEDEKL+ CIR+  G        WS VPK+AGL RCGKSCRLRWINYLRPDLKRG FSAEEERTI+DVHRILGNRWAQIAK
Subjt:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK

Query:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL
        HLPGRTDNEIKNFWNS IKKKL+A GLDPNTHNLL
Subjt:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL

XP_023900538.1 transcription factor MYB86-like isoform X1 [Quercus suber]1.8e-5883.7Show/hide
Query:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK
        MGH   C K KVKRGLWSPEEDEKLVN I       +GH  SWSSVPKLAGL RCGKSCRLRWINYLRPDLKRGSFSA+EER I+DVHRILGNRWAQIAK
Subjt:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK

Query:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL
        HLPGRTDNE+KNFWNSCIKKKL+AQGLDPNTHNLL
Subjt:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL

TrEMBL top hitse value%identityAlignment
A0A6J1D018 transcription factor MYB8-like4.1e-7799.26Show/hide
Query:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK
        MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK
Subjt:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK

Query:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL
        HLPGRTDNEIKNFWNSCIKKKL+AQGLDPNTHNLL
Subjt:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL

A0A6J1EM66 protein ODORANT1-like8.5e-5981.48Show/hide
Query:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK
        MGH   C KVKVKRGLWSPEEDEKL+ CIR+  G        WS VPK+AGL RCGKSCRLRWINYLRPDLKRG FSAEEERTI+DVHRILGNRWAQIAK
Subjt:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK

Query:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL
        HLPGRTDNEIKNFWNS IKKKL+A GLDPNTHNLL
Subjt:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL

A0A6J1KS24 transcription factor MYB13-like8.5e-5981.48Show/hide
Query:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK
        MGH   C KVKVKRGLWSPEEDEKL+ CIR+  G        WS VPK+AGL RCGKSCRLRWINYLRPDLKRG FSAEEERTI+DVHRILGNRWAQIAK
Subjt:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK

Query:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL
        HLPGRTDNEIKNFWNS IKKKL+A GLDPNTHNLL
Subjt:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL

A0A6P8D1R8 transcription factor MYB8-like4.2e-5882.22Show/hide
Query:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK
        MGH   C K KVKRGLWSPEEDEKL+  I       +GH  SWSSVPKLAGL RCGKSCRLRWINYLRPDLKRGSF+A+EERTI+DVHRILGNRW+QIAK
Subjt:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK

Query:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL
        HLPGRTDNE+KNFWNSCIKKKLIAQGLDPNTHNLL
Subjt:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL

A0A7N2MVY0 Uncharacterized protein1.9e-5882.96Show/hide
Query:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK
        MGH   C K KVKRGLWSPEEDEKLVN I       +GH  SWSSVPKLAGL RCGKSCRLRWINYLRPDLKRGSFS++EER I+DVHRILGNRWAQIAK
Subjt:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK

Query:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL
        HLPGRTDNE+KNFWNSCIKKKL+AQGLDPNTHNLL
Subjt:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL

SwissProt top hitse value%identityAlignment
P20027 Myb-related protein Hv332.9e-4873.77Show/hide
Query:  KVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEI
        KV++GLWSPEEDEKL N I R   G       WSSVP+LA L RCGKSCRLRWINYLRPDLKRG FS +EE  IV +H+ILGNRW+QIA HLPGRTDNEI
Subjt:  KVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEI

Query:  KNFWNSCIKKKLIAQGLDPNTH
        KNFWNSCIKKKL  QG+DP TH
Subjt:  KNFWNSCIKKKLIAQGLDPNTH

Q8LPH6 Transcription factor MYB861.8e-5068.15Show/hide
Query:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK
        MG    C K K+++GLWSPEEDEKL+N I R     +GH   WSSVPKLAGL RCGKSCRLRWINYLRPDLKRG+FS +EE  I+++H  LGNRW+QIA 
Subjt:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK

Query:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL
         LPGRTDNEIKNFWNSC+KKKL  +G+DP TH  L
Subjt:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL

Q8VZQ2 Transcription factor MYB613.5e-4968.94Show/hide
Query:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK
        MG    C K K+++GLWSPEEDEKL+  I       +GH   WSSVPKLAGL RCGKSCRLRWINYLRPDLKRG+FS EEE  IV++H +LGNRW+QIA 
Subjt:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK

Query:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTH
         LPGRTDNEIKN WNS IKKKL  +G+DPNTH
Subjt:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTH

Q9FJP2 Transcription factor MYB534.7e-4662.88Show/hide
Query:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK
        MG      +  +K+G W PEED+KL+N I +     +GH+ SWS++PKLAGL RCGKSCRLRW NYLRPD+KRG FSAEEE TI+++H +LGN+W+ IA 
Subjt:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK

Query:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTH
        HLPGRTDNEIKNFWN+ +KKKLI  G DP TH
Subjt:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTH

Q9SPG3 Transcription factor MYB269.4e-4764.58Show/hide
Query:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAG---------LARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRIL
        MGH   C K KVKRGLWSPEEDEKL+N I        GH   WSSVPK AG         L RCGKSCRLRWINYLRPDLKRGSFS +E   I+++H IL
Subjt:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAG---------LARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRIL

Query:  GNRWAQIAKHLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL
        GNRWAQIAKHLPGRTDNE+KNFWNS IKKKL++     + H+ L
Subjt:  GNRWAQIAKHLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL

Arabidopsis top hitse value%identityAlignment
AT1G09540.1 myb domain protein 612.5e-5068.94Show/hide
Query:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK
        MG    C K K+++GLWSPEEDEKL+  I       +GH   WSSVPKLAGL RCGKSCRLRWINYLRPDLKRG+FS EEE  IV++H +LGNRW+QIA 
Subjt:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK

Query:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTH
         LPGRTDNEIKN WNS IKKKL  +G+DPNTH
Subjt:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTH

AT1G57560.1 myb domain protein 503.8e-5169.77Show/hide
Query:  CRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRT
        C K K+++GLWSPEEDEKL+N I +     +GH   WSSVPKLAGL RCGKSCRLRWINYLRPDLKRG+FS+EE+  IV++H +LGNRW+QIA  LPGRT
Subjt:  CRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRT

Query:  DNEIKNFWNSCIKKKLIAQGLDPNTHNLL
        DNEIKN WNSCIKKKL+ +G+DP TH  L
Subjt:  DNEIKNFWNSCIKKKLIAQGLDPNTHNLL

AT3G12720.1 myb domain protein 673.2e-5877.04Show/hide
Query:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK
        MGH   C K KVKRGLWSPEEDEKL+  I       +GH  SWSSVPKLAGL RCGKSCRLRWINYLRPDL+RGSF+ EEE+ I+DVHRILGN+WAQIAK
Subjt:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK

Query:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL
        HLPGRTDNE+KNFWNSCIKKKL++QGLDP+THNL+
Subjt:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL

AT3G13890.2 myb domain protein 263.2e-5068.89Show/hide
Query:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK
        MGH   C K KVKRGLWSPEEDEKL+N I        GH   WSSVPK AGL RCGKSCRLRWINYLRPDLKRGSFS +E   I+++H ILGNRWAQIAK
Subjt:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK

Query:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL
        HLPGRTDNE+KNFWNS IKKKL++     + H+ L
Subjt:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL

AT5G26660.1 myb domain protein 861.3e-5168.15Show/hide
Query:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK
        MG    C K K+++GLWSPEEDEKL+N I R     +GH   WSSVPKLAGL RCGKSCRLRWINYLRPDLKRG+FS +EE  I+++H  LGNRW+QIA 
Subjt:  MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAK

Query:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL
         LPGRTDNEIKNFWNSC+KKKL  +G+DP TH  L
Subjt:  HLPGRTDNEIKNFWNSCIKKKLIAQGLDPNTHNLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCACGGGGGGTGGTGCAGGAAAGTGAAGGTGAAGAGAGGTTTGTGGTCTCCCGAGGAAGACGAGAAGCTGGTGAATTGTATAAGGAGAAGGAGTGGTGGTGGAAA
TGGGCATGCTTTTTCCTGGAGTAGCGTGCCTAAATTGGCAGGGTTGGCGAGATGTGGGAAGAGCTGCCGGTTGAGGTGGATCAACTACCTGAGACCAGATCTGAAGAGGG
GTAGCTTCAGCGCCGAGGAAGAGAGGACCATCGTGGACGTCCACCGGATCCTGGGGAACCGATGGGCCCAGATAGCCAAGCATCTCCCCGGCAGAACTGACAACGAGATC
AAGAACTTCTGGAACTCCTGCATCAAGAAGAAGCTCATTGCCCAAGGCCTGGATCCCAATACCCACAATCTTCTC
mRNA sequenceShow/hide mRNA sequence
ATGGGGCACGGGGGGTGGTGCAGGAAAGTGAAGGTGAAGAGAGGTTTGTGGTCTCCCGAGGAAGACGAGAAGCTGGTGAATTGTATAAGGAGAAGGAGTGGTGGTGGAAA
TGGGCATGCTTTTTCCTGGAGTAGCGTGCCTAAATTGGCAGGGTTGGCGAGATGTGGGAAGAGCTGCCGGTTGAGGTGGATCAACTACCTGAGACCAGATCTGAAGAGGG
GTAGCTTCAGCGCCGAGGAAGAGAGGACCATCGTGGACGTCCACCGGATCCTGGGGAACCGATGGGCCCAGATAGCCAAGCATCTCCCCGGCAGAACTGACAACGAGATC
AAGAACTTCTGGAACTCCTGCATCAAGAAGAAGCTCATTGCCCAAGGCCTGGATCCCAATACCCACAATCTTCTC
Protein sequenceShow/hide protein sequence
MGHGGWCRKVKVKRGLWSPEEDEKLVNCIRRRSGGGNGHAFSWSSVPKLAGLARCGKSCRLRWINYLRPDLKRGSFSAEEERTIVDVHRILGNRWAQIAKHLPGRTDNEI
KNFWNSCIKKKLIAQGLDPNTHNLL