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MS022528 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022528
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Genome locationscaffold720:321280..321366
RNA-Seq ExpressionMS022528
SyntenyMS022528
Gene Ontology termsGO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022930020.1 transcription factor DYT1 [Cucurbita moschata]1.2e-04100Show/hide
Query:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
        SKNLHAERRRRQKLSDRLLLLRATVPIIT
Subjt:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
TrEMBL top hitse value%identityAlignment
A0A6J1EVV3 transcription factor DYT15.8e-05100Show/hide
Query:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
        SKNLHAERRRRQKLSDRLLLLRATVPIIT
Subjt:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G10570.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.2e-0472.41Show/hide
Query:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
        SKNL AERRRR++L+DRL LLR+ VP IT
Subjt:  SKNLHAERRRRQKLSDRLLLLRATVPIIT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCGAAGAACCTCCATGCGGAGAGACGACGGAGGCAGAAGCTTAGTGATAGGCTATTATTATTACGTGCTACTGTCCCAATCATCACA
mRNA sequenceShow/hide mRNA sequence
TCGAAGAACCTCCATGCGGAGAGACGACGGAGGCAGAAGCTTAGTGATAGGCTATTATTATTACGTGCTACTGTCCCAATCATCACA
Protein sequenceShow/hide protein sequence
SKNLHAERRRRQKLSDRLLLLRATVPIIT