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MS022530 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022530
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor DYT1
Genome locationscaffold720:321733..321909
RNA-Seq ExpressionMS022530
SyntenyMS022530
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601683.1 Transcription factor DYT1, partial [Cucurbita argyrosperma subsp. sororia]3.1e-1577.97Show/hide
Query:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
        QADV V+QIDE KLW+KILFEK+KGAFTKLIQ ++S GFEL D SVTTV+GAVLVTT+I
Subjt:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
PWA79271.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Artemisia annua]9.2e-1266.1Show/hide
Query:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
        +++V VT IDE KLWVKI+FEK+ G FTKL++ L  FG EL+DISVTT KGAVLVT+ I
Subjt:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
XP_022146507.1 transcription factor DYT1, partial [Momordica charantia]9.8e-22100Show/hide
Query:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
        QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
Subjt:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
XP_022930020.1 transcription factor DYT1 [Cucurbita moschata]3.1e-1577.97Show/hide
Query:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
        QADV V+QIDE KLW+KILFEK+KGAFTKLIQ ++S GFEL D SVTTV+GAVLVTT+I
Subjt:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
XP_022994545.1 transcription factor DYT1 [Cucurbita maxima]3.1e-1577.97Show/hide
Query:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
        QADV V+QIDE KLW+KILFEK+KGAFTKLIQ ++S GFEL D SVTTV+GAVLVTT+I
Subjt:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
TrEMBL top hitse value%identityAlignment
A0A2U1P0K2 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein4.5e-1266.1Show/hide
Query:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
        +++V VT IDE KLWVKI+FEK+ G FTKL++ L  FG EL+DISVTT KGAVLVT+ I
Subjt:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
A0A6J1CZR8 transcription factor DYT14.7e-22100Show/hide
Query:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
        QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
Subjt:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
A0A6J1EVV3 transcription factor DYT11.5e-1577.97Show/hide
Query:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
        QADV V+QIDE KLW+KILFEK+KGAFTKLIQ ++S GFEL D SVTTV+GAVLVTT+I
Subjt:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
A0A6J1K1J3 transcription factor DYT11.5e-1577.97Show/hide
Query:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
        QADV V+QIDE KLW+KILFEK+KGAFTKLIQ ++S GFEL D SVTTV+GAVLVTT+I
Subjt:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
K7M9Y0 BHLH domain-containing protein6.4e-1161.02Show/hide
Query:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
        QA+VRV QIDE KLWVKI+ EK++G F+KL++ L++FG ELID + TT KGA L+T+ I
Subjt:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
SwissProt top hitse value%identityAlignment
O81900 Transcription factor DYT11.9e-0742.37Show/hide
Query:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
        + +V++ +I E+K W+KI+ EK+ G FTK ++ +   GFE+IDIS+TT  GA+L++  +
Subjt:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
Arabidopsis top hitse value%identityAlignment
AT2G16910.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein7.5e-0436.17Show/hide
Query:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVT
        +  V V Q+D ++ +VK++ E + G FT+L++ LDS G E+ + + T
Subjt:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVT
AT4G21330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.3e-0842.37Show/hide
Query:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII
        + +V++ +I E+K W+KI+ EK+ G FTK ++ +   GFE+IDIS+TT  GA+L++  +
Subjt:  QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGCAGATGTGAGGGTTACTCAAATTGACGAACAAAAACTCTGGGTTAAGATACTTTTTGAGAAGCAAAAGGGCGCCTTCACTAAATTAATCCAAGGGTTGGATTCTTT
TGGATTTGAACTCATTGATATTAGTGTCACAACAGTGAAAGGAGCAGTTCTTGTAACAACCATTATC
mRNA sequenceShow/hide mRNA sequence
CAGGCAGATGTGAGGGTTACTCAAATTGACGAACAAAAACTCTGGGTTAAGATACTTTTTGAGAAGCAAAAGGGCGCCTTCACTAAATTAATCCAAGGGTTGGATTCTTT
TGGATTTGAACTCATTGATATTAGTGTCACAACAGTGAAAGGAGCAGTTCTTGTAACAACCATTATC
Protein sequenceShow/hide protein sequence
QADVRVTQIDEQKLWVKILFEKQKGAFTKLIQGLDSFGFELIDISVTTVKGAVLVTTII