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MS022532 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022532
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description(R)-mandelonitrile lyase-like
Genome locationscaffold720:371955..372241
RNA-Seq ExpressionMS022532
SyntenyMS022532
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors (molecular function)
GO:0046593 - mandelonitrile lyase activity (molecular function)
GO:0050660 - flavin adenine dinucleotide binding (molecular function)
InterPro domainsIPR036188 - FAD/NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV81368.1 GMC_oxred_N domain-containing protein/GMC_oxred_C domain-containing protein [Cephalotus follicularis]7.2e-3583.53Show/hide
Query:  MRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        + WDLRVVNQSYEWVERA+VFRP+L+NWQSAVRDGLLEAGVDPYNG ++D+ VGTKIGGS FDSSGRRHS ADLLNYAKA+NI+V
Subjt:  MRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV

KAA8541557.1 hypothetical protein F0562_022709 [Nyssa sinensis]2.7e-3483.53Show/hide
Query:  MRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        + WDLRVVNQSYEWVERAIVFRP+LKNWQSAVRDGLL+AG+DPYNG +LD+ VGTKIGGS FDSSG+RHS ADLL+YAK SNIRV
Subjt:  MRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV

RVW22170.1 (R)-mandelonitrile lyase-like [Vitis vinifera]4.7e-3478.65Show/hide
Query:  KVNYMRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        K + ++WDL +VNQSYEWVERA+VFRP+LKNWQSAVRDGLLEAGVDPY G  LD++VGTKIGGS FDSSGRRH+ ADLL YAKA+NIRV
Subjt:  KVNYMRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV

WP_165001741.1 GMC family oxidoreductase N-terminal domain-containing protein [Candidatus Frankia datiscae]5.9e-3790.59Show/hide
Query:  MRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        + WDLRVVNQSYEWVERAIVFRP+LKNWQSAVRDGLLEAGVDPYNG TLD+SVGTKIGGS FDSSGRRHS ADLL+YAKASNIRV
Subjt:  MRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV

XP_034674520.1 LOW QUALITY PROTEIN: (R)-mandelonitrile lyase-like [Vitis riparia]2.7e-3482.35Show/hide
Query:  MRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        M+WDL +VNQSYEWVERA+VFRP+LKNWQSAVRDGLLEAGVDPY G  LD++VGTKIGGS FDSSGRRH+ ADLL YAKA+NIRV
Subjt:  MRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV

TrEMBL top hitse value%identityAlignment
A0A1Q3CMS4 GMC_oxred_N domain-containing protein/GMC_oxred_C domain-containing protein3.5e-3583.53Show/hide
Query:  MRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        + WDLRVVNQSYEWVERA+VFRP+L+NWQSAVRDGLLEAGVDPYNG ++D+ VGTKIGGS FDSSGRRHS ADLLNYAKA+NI+V
Subjt:  MRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV

A0A438CG31 (R)-mandelonitrile lyase-like2.3e-3478.65Show/hide
Query:  KVNYMRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        K + ++WDL +VNQSYEWVERA+VFRP+LKNWQSAVRDGLLEAGVDPY G  LD++VGTKIGGS FDSSGRRH+ ADLL YAKA+NIRV
Subjt:  KVNYMRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV

A0A5J5BIC5 GMC_OxRdtase_N domain-containing protein1.3e-3483.53Show/hide
Query:  MRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        + WDLRVVNQSYEWVERAIVFRP+LKNWQSAVRDGLL+AG+DPYNG +LD+ VGTKIGGS FDSSG+RHS ADLL+YAK SNIRV
Subjt:  MRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV

A0A7J7D5K5 (R)-mandelonitrile lyase-like isoform X16.6e-3484.71Show/hide
Query:  MRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        + WDLRVVNQSYEWVERAIVFRP+LKNWQSAVRDGLLEAGVDPYN  +LD+ +GTKIGGS FDSSGRRHS ADLLNYAK  NIRV
Subjt:  MRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV

F6HT68 GMC_OxRdtase_N domain-containing protein2.3e-3478.65Show/hide
Query:  KVNYMRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        K + ++WDL +VNQSYEWVERA+VFRP+LKNWQSAVRDGLLEAGVDPY G  LD++VGTKIGGS FDSSGRRH+ ADLL YAKA+NIRV
Subjt:  KVNYMRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV

SwissProt top hitse value%identityAlignment
O24243 (R)-mandelonitrile lyase 18.9e-2048.24Show/hide
Query:  MRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        + WDL +VN++YEWVE AIV +P+ ++WQS + +G LEAG+ P NG +LD+  GT++ GS FD++G RH+  +LLN    +N+ V
Subjt:  MRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV

P52706 (R)-mandelonitrile lyase 12.3e-2050.6Show/hide
Query:  WDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        WD+ +VN++YEWVE  IVF+P+ + WQS      LEAGVDP +G +LD+  GT+I GS FD+ G RH+  +LLN   ++N+RV
Subjt:  WDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV

Q945K2 (R)-mandelonitrile lyase 24.0e-2049.4Show/hide
Query:  WDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        WD+ +VNQ+YEWVE  IV++P+ ++WQS  +   LEAGV P +G +LD+  GT+I GS FD+ G RH+  +LLN   ++N+RV
Subjt:  WDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV

Q9S746 Protein HOTHEAD1.9e-2257.83Show/hide
Query:  WDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        WD ++V +SY WVER IV +P L  WQ A+RD LLE GV P+NG T D+  GTKIGG+IFD  GRRH+ A+LL YA    +RV
Subjt:  WDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV

Q9SSM2 (R)-mandelonitrile lyase-like3.0e-3173.49Show/hide
Query:  WDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        WDL  VNQSYEWVERAIVFRP L+ WQ+A+RD LLE GV P+NG TL++ VGTKIGGS FD +GRRHS ADLL YA++SNIRV
Subjt:  WDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV

Arabidopsis top hitse value%identityAlignment
AT1G12570.1 Glucose-methanol-choline (GMC) oxidoreductase family protein2.7e-2451.55Show/hide
Query:  FFTGIKVNYMR---WDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        F+T     Y+R   WD  + N+SY+WVE  + F+P +  WQ+AVRDGLLEAG+ P NG T D+  GTK GG+IFD +G RH+ ADLL YA    I V
Subjt:  FFTGIKVNYMR---WDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV

AT1G72970.1 Glucose-methanol-choline (GMC) oxidoreductase family protein1.4e-2357.83Show/hide
Query:  WDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        WD ++V +SY WVER IV +P L  WQ A+RD LLE GV P+NG T D+  GTKIGG+IFD  GRRH+ A+LL YA    +RV
Subjt:  WDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV

AT1G72970.2 Glucose-methanol-choline (GMC) oxidoreductase family protein1.4e-2357.83Show/hide
Query:  WDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        WD ++V +SY WVER IV +P L  WQ A+RD LLE GV P+NG T D+  GTKIGG+IFD  GRRH+ A+LL YA    +RV
Subjt:  WDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV

AT1G73050.1 Glucose-methanol-choline (GMC) oxidoreductase family protein2.1e-3273.49Show/hide
Query:  WDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        WDL  VNQSYEWVERAIVFRP L+ WQ+A+RD LLE GV P+NG TL++ VGTKIGGS FD +GRRHS ADLL YA++SNIRV
Subjt:  WDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV

AT3G56060.1 Glucose-methanol-choline (GMC) oxidoreductase family protein1.8e-2356.63Show/hide
Query:  WDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV
        W+   V  +YEWVE+ +VF P +  WQSA RDGLLEAGV PYNG T ++ VGTK GG+IFD  G RH+ A+LL YA  + I V
Subjt:  WDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTTTTACAGGAATTAAAGTTAATTATATGAGATGGGACCTCCGAGTGGTGAACCAGTCCTATGAGTGGGTTGAGAGGGCTATCGTCTTTAGGCCGGACCTCAAGAATTG
GCAATCGGCAGTCAGAGACGGGCTATTGGAAGCCGGTGTTGATCCCTATAATGGGTTGACTTTGGATTATTCAGTGGGTACCAAGATTGGTGGTTCGATATTCGACAGTT
CTGGTCGTAGACACAGTGTTGCTGATCTCCTCAACTATGCGAAAGCTTCGAATATTCGAGTG
mRNA sequenceShow/hide mRNA sequence
TTTTTTACAGGAATTAAAGTTAATTATATGAGATGGGACCTCCGAGTGGTGAACCAGTCCTATGAGTGGGTTGAGAGGGCTATCGTCTTTAGGCCGGACCTCAAGAATTG
GCAATCGGCAGTCAGAGACGGGCTATTGGAAGCCGGTGTTGATCCCTATAATGGGTTGACTTTGGATTATTCAGTGGGTACCAAGATTGGTGGTTCGATATTCGACAGTT
CTGGTCGTAGACACAGTGTTGCTGATCTCCTCAACTATGCGAAAGCTTCGAATATTCGAGTG
Protein sequenceShow/hide protein sequence
FFTGIKVNYMRWDLRVVNQSYEWVERAIVFRPDLKNWQSAVRDGLLEAGVDPYNGLTLDYSVGTKIGGSIFDSSGRRHSVADLLNYAKASNIRV