CuGenDBv2

Gene ID	MS022535
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A2
Genome location	scaffold720:410493..410656
RNA-Seq Expression	MS022535
Synteny	MS022535
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

QVX28981.1 photosystem I P700 apoprotein A2 [Galactia jussiaeana]

4.1e-11

92.31

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Query:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL
        TRGGALSPVNIAY GVYQW YTIGLRTNGD YTGALFLL
Subjt:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL

QVX29153.1 photosystem I P700 apoprotein A2 [Canavalia villosa]

4.1e-11

92.31

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Query:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL
        TRGGALSPVNIAY GVYQW YTIGLRTNGD YTGALFLL
Subjt:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL

XP_038902466.1 photosystem I P700 chlorophyll a apoprotein A2-like [Benincasa hispida]

7.0e-11

89.74

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Query:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL
        TRGGAL PVNIAYFGVYQW YTI LRTNGD YTGALFLL
Subjt:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL

YP_009764642.1 photosystem I P700 apoprotein A2 [Canavalia cathartica]

4.1e-11

92.31

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Query:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL
        TRGGALSPVNIAY GVYQW YTIGLRTNGD YTGALFLL
Subjt:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL

YP_009945416.1 photosystem I P700 apoprotein A2 [Sechium edule]

1.2e-10

89.74

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Query:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL
        TRGGAL PVNIAY GVYQW YTIGLRTNGD YTGALFLL
Subjt:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL

TrEMBL top hits

e value

%identity

Alignment

A0A1P8J737 Photosystem I P700 chlorophyll a apoprotein A2

5.8e-11

89.74

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Query:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL
        TRGGAL PVNIAY GVYQW YTIGLRTNGD YTGALFLL
Subjt:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL

A0A346Q3G8 Photosystem I P700 chlorophyll a apoprotein A2

5.8e-11

89.74

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Query:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL
        TRGGAL PVNIAY GVYQW YTIGLRTNGD YTGALFLL
Subjt:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL

A0A6H0DYM9 Photosystem I P700 chlorophyll a apoprotein A2

2.0e-11

92.31

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Query:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL
        TRGGALSPVNIAY GVYQW YTIGLRTNGD YTGALFLL
Subjt:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL

A0A7G1HK08 Photosystem I P700 chlorophyll a apoprotein A2

2.0e-11

92.31

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Query:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL
        TRGGALSPVNIAY GVYQW YTIGLRTNGD YTGALFLL
Subjt:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL

A0A7M4C9H1 Photosystem I P700 chlorophyll a apoprotein A2

2.0e-11

92.31

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Query:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL
        TRGGALSPVNIAY GVYQW YTIGLRTNGD YTGALFLL
Subjt:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL

SwissProt top hits

e value

%identity

Alignment

A4GG98 Photosystem I P700 chlorophyll a apoprotein A2

2.7e-13

87.18

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Query:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL
        TRGGAL PVNIAY GVYQW YTIGLRTNGD YTGA+FLL
Subjt:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL

P58385 Photosystem I P700 chlorophyll a apoprotein A2

4.6e-13

87.18

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Query:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL
        TRGGAL PVNIAY GVYQW YTIGLRTNGD Y+GALFLL
Subjt:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL

Q2PMU2 Photosystem I P700 chlorophyll a apoprotein A2

1.6e-13

89.74

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Query:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL
        TRGGAL PVNIAY GVYQW YTIGLRTNGD YTGALFLL
Subjt:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL

Q3BAP1 Photosystem I P700 chlorophyll a apoprotein A2

2.7e-13

87.18

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Query:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL
        TRGGA+ PVNIAY GVYQW YTIGLRTNGD YTGALFLL
Subjt:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL

Q4VZN4 Photosystem I P700 chlorophyll a apoprotein A2

1.6e-13

89.74

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Query:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL
        TRGGAL PVNIAY GVYQW YTIGLRTNGD YTGALFLL
Subjt:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

9.4e-14

87.18

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Query:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL
        TRGGAL PVNIAY GVYQW YTIGLRTN D YTGALFLL
Subjt:  TRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL

Sequences

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CDS sequence

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ATGCAATTTGGAATCCTCATTTTGGTCAATTGGCCGTCGAAGACTCGAGGGGGTGCTCTTAGCCCAGTGAATATCGCTTATTTTGGTGTTTATCAGTGGTTGTATACAAT
CGGTTTACGTACTAATGGGGATTTTTATACTGGAGCTCTTTTTCTATTA

mRNA sequence

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ATGCAATTTGGAATCCTCATTTTGGTCAATTGGCCGTCGAAGACTCGAGGGGGTGCTCTTAGCCCAGTGAATATCGCTTATTTTGGTGTTTATCAGTGGTTGTATACAAT
CGGTTTACGTACTAATGGGGATTTTTATACTGGAGCTCTTTTTCTATTA

Protein sequence

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MQFGILILVNWPSKTRGGALSPVNIAYFGVYQWLYTIGLRTNGDFYTGALFLL

MS022535 (gene) of Bitter gourd (TR) v1 genome