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MS022615 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022615
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold188:335402..335614
RNA-Seq ExpressionMS022615
SyntenyMS022615
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
VVA20479.1 Hypothetical predicted protein, partial [Prunus dulcis]3.4e-0544Show/hide
Query:  WNVKSLGATYKSCLVKETVRKRSPVVVILQETKCSFVDKTLVKTAWSSQ----LFRMQLVRQGYRGILVLWDEAS
        WN++ LG+  K  LVKE +R+  P +VIL ETK   VD+ LV   W S+    +F   L R G  GI VLW+  S
Subjt:  WNVKSLGATYKSCLVKETVRKRSPVVVILQETKCSFVDKTLVKTAWSSQ----LFRMQLVRQGYRGILVLWDEAS

XP_022145142.1 uncharacterized protein LOC111014657 [Momordica charantia]3.8e-0438.36Show/hide
Query:  WNVKSLGATYKSCLVKETVRKRSPVVVILQETKCSFVDKTLVKTAWSS-QLFRMQLVRQGYR-GILVLWDEAS
        WNV+ LG+  K   +K+T+    P +VIL ETK S ++   +K+ WSS  +    L   G   GI++LWD+ S
Subjt:  WNVKSLGATYKSCLVKETVRKRSPVVVILQETKCSFVDKTLVKTAWSS-QLFRMQLVRQGYR-GILVLWDEAS

XP_022158956.1 uncharacterized protein LOC111025405 [Momordica charantia]3.8e-0438.03Show/hide
Query:  WNVKSLGATYKSCLVKETVRKRSPVVVILQETKCSFVDKTLVKTAWSSQLFRMQLVRQG--YRGILVLWDE
        WNV+ L +  K  L+K+ + + +P VVILQETK S++D  +VK+ WS+       +       GIL+LW++
Subjt:  WNVKSLGATYKSCLVKETVRKRSPVVVILQETKCSFVDKTLVKTAWSSQLFRMQLVRQG--YRGILVLWDE

XP_028075126.1 uncharacterized protein LOC114277426 [Camellia sinensis]6.5e-0433.8Show/hide
Query:  WNVKSLGATYKSCLVKETVRKRSPVVVILQETKCSFVDKTLVKTAWSSQLFRMQLVRQGYR--GILVLWDE
        WNV+ L +  K  +VK+ ++ + P VV+ QETKC   D+  +++ W ++  R  ++    R  GIL++WD+
Subjt:  WNVKSLGATYKSCLVKETVRKRSPVVVILQETKCSFVDKTLVKTAWSSQLFRMQLVRQGYR--GILVLWDE

TrEMBL top hitse value%identityAlignment
A0A5E4F090 Reverse transcriptase domain-containing protein (Fragment)1.7e-0544Show/hide
Query:  WNVKSLGATYKSCLVKETVRKRSPVVVILQETKCSFVDKTLVKTAWSSQ----LFRMQLVRQGYRGILVLWDEAS
        WN++ LG+  K  LVKE +R+  P +VIL ETK   VD+ LV   W S+    +F   L R G  GI VLW+  S
Subjt:  WNVKSLGATYKSCLVKETVRKRSPVVVILQETKCSFVDKTLVKTAWSSQ----LFRMQLVRQGYRGILVLWDEAS

A0A6J1CVN2 uncharacterized protein LOC1110146571.8e-0438.36Show/hide
Query:  WNVKSLGATYKSCLVKETVRKRSPVVVILQETKCSFVDKTLVKTAWSS-QLFRMQLVRQGYR-GILVLWDEAS
        WNV+ LG+  K   +K+T+    P +VIL ETK S ++   +K+ WSS  +    L   G   GI++LWD+ S
Subjt:  WNVKSLGATYKSCLVKETVRKRSPVVVILQETKCSFVDKTLVKTAWSS-QLFRMQLVRQGYR-GILVLWDEAS

A0A6J1E2G6 uncharacterized protein LOC1110254051.8e-0438.03Show/hide
Query:  WNVKSLGATYKSCLVKETVRKRSPVVVILQETKCSFVDKTLVKTAWSSQLFRMQLVRQG--YRGILVLWDE
        WNV+ L +  K  L+K+ + + +P VVILQETK S++D  +VK+ WS+       +       GIL+LW++
Subjt:  WNVKSLGATYKSCLVKETVRKRSPVVVILQETKCSFVDKTLVKTAWSSQLFRMQLVRQG--YRGILVLWDE

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)1.7e-0544Show/hide
Query:  WNVKSLGATYKSCLVKETVRKRSPVVVILQETKCSFVDKTLVKTAWSSQ----LFRMQLVRQGYRGILVLWDEAS
        WN++ LG+  K  LVKE +R+  P +VIL ETK   VD+ LV   W S+    +F   L R G  GI VLW+  S
Subjt:  WNVKSLGATYKSCLVKETVRKRSPVVVILQETKCSFVDKTLVKTAWSSQ----LFRMQLVRQGYRGILVLWDEAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGAATGTGAAAAGTTTAGGTGCTACCTATAAAAGCTGTCTTGTCAAGGAAACGGTTAGGAAACGCAGTCCAGTCGTGGTTATTCTTCAAGAAACTAAATGCAGC
TTCGTTGATAAAACCCTAGTGAAGACTGCGTGGAGCTCTCAACTATTCAGGATGCAATTGGTGCGTCAGGGGTATAGGGGTATCTTGGTTCTCTGGGATGAAGCC
TCT
mRNA sequenceShow/hide mRNA sequence
TGGAATGTGAAAAGTTTAGGTGCTACCTATAAAAGCTGTCTTGTCAAGGAAACGGTTAGGAAACGCAGTCCAGTCGTGGTTATTCTTCAAGAAACTAAATGCAGC
TTCGTTGATAAAACCCTAGTGAAGACTGCGTGGAGCTCTCAACTATTCAGGATGCAATTGGTGCGTCAGGGGTATAGGGGTATCTTGGTTCTCTGGGATGAAGCC
TCT
Protein sequenceShow/hide protein sequence
WNVKSLGATYKSCLVKETVRKRSPVVVILQETKCSFVDKTLVKTAWSSQLFRMQLVRQGYRGILVLWDEAS