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MS022668 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022668
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUbiquitin-conjugating enzyme E2
Genome locationscaffold1354:123320..123677
RNA-Seq ExpressionMS022668
SyntenyMS022668
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_007513490.1 predicted protein [Bathycoccus prasinos]6.1e-3962.71Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D   W+ATIIGP  +PY+ GLF ++I+ PP+YP KPPKV+FKTK+YHPN+NS G+IC DILK  WSPA T+S VL++ICS+L DPNPDDPL  EIA +YK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFA
         +RP+++ +AREWT+K+A
Subjt:  NNRPQFDKIAREWTQKFA

XP_010029660.1 ubiquitin-conjugating enzyme E2 28 [Eucalyptus grandis]1.0e-3861.86Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D   W+ATIIGP  +PY  G+F ++I+ PP+YP KPPKV+F+TK++HPNINS GNIC DILK  WSPA T+S VL++ICS+L DPNPDDPL  EIA +YK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFA
        ++RP+++ +AR WTQK+A
Subjt:  NNRPQFDKIAREWTQKFA

XP_019253133.1 PREDICTED: ubiquitin-conjugating enzyme E2 5B-like [Nicotiana attenuata]6.1e-3962.71Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D   W+ATIIGP  +PY  G+F+++I+ PP+YP KPPKV+FKTK++HPNINS GNIC DILK  WSPA T+S VL++ICS+L DPNPDDPL  EIA +YK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFA
        ++R +++ +AR WTQKFA
Subjt:  NNRPQFDKIAREWTQKFA

XP_022157782.1 ubiquitin-conjugating enzyme E2 11-like [Momordica charantia]1.5e-6196.64Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D NQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKV+FKTKIYHPNINSKGNIC DILKGNWSPAFTLSSVLVAICSM+PDPNPDDPLEIEIARLYK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFAH
        NNRPQFDKIAREWTQKFAH
Subjt:  NNRPQFDKIAREWTQKFAH

XP_024662836.1 Ubiquitin-conjugating enzyme E2 [Wickerhamiella sorbophila]6.1e-3964.41Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D   W+ATI+GP  +PY +GLF L I+ PP+YP KPPKV+FKT+IYHPNIN+ G+IC DILK  WSPA T+  VL++ICS+L DPNPDDPL  EIA LYK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFA
         NR +FD  AREWT+K+A
Subjt:  NNRPQFDKIAREWTQKFA

TrEMBL top hitse value%identityAlignment
A0A059AS67 UBC core domain-containing protein5.0e-3961.86Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D   W+ATIIGP  +PY  G+F ++I+ PP+YP KPPKV+F+TK++HPNINS GNIC DILK  WSPA T+S VL++ICS+L DPNPDDPL  EIA +YK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFA
        ++RP+++ +AR WTQK+A
Subjt:  NNRPQFDKIAREWTQKFA

A0A1J6IKT8 Ubiquitin-conjugating enzyme e2-17 kDa2.9e-3962.71Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D   W+ATIIGP  +PY  G+F+++I+ PP+YP KPPKV+FKTK++HPNINS GNIC DILK  WSPA T+S VL++ICS+L DPNPDDPL  EIA +YK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFA
        ++R +++ +AR WTQKFA
Subjt:  NNRPQFDKIAREWTQKFA

A0A2T0FD47 Ubiquitin-conjugating enzyme E22.9e-3964.41Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D   W+ATI+GP  +PY +GLF L I+ PP+YP KPPKV+FKT+IYHPNIN+ G+IC DILK  WSPA T+  VL++ICS+L DPNPDDPL  EIA LYK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFA
         NR +FD  AREWT+K+A
Subjt:  NNRPQFDKIAREWTQKFA

A0A6J1DVE6 ubiquitin-conjugating enzyme E2 11-like7.2e-6296.64Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D NQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKV+FKTKIYHPNINSKGNIC DILKGNWSPAFTLSSVLVAICSM+PDPNPDDPLEIEIARLYK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFAH
        NNRPQFDKIAREWTQKFAH
Subjt:  NNRPQFDKIAREWTQKFAH

K8EU87 UBC core domain-containing protein2.9e-3962.71Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D   W+ATIIGP  +PY+ GLF ++I+ PP+YP KPPKV+FKTK+YHPN+NS G+IC DILK  WSPA T+S VL++ICS+L DPNPDDPL  EIA +YK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFA
         +RP+++ +AREWT+K+A
Subjt:  NNRPQFDKIAREWTQKFA

SwissProt top hitse value%identityAlignment
P35134 Ubiquitin-conjugating enzyme E2 111.1e-4062.71Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D   W+ATI+GP  +PY  G+F +SI+ PP+YP KPPKVSFKTK+YHPNINS G+IC DILK  WSPA T+S VL++ICS+L DPNPDDPL  EIA +YK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFA
         +R +++  AR WTQK+A
Subjt:  NNRPQFDKIAREWTQKFA

P62837 Ubiquitin-conjugating enzyme E2 D22.0e-4061.86Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D   W+ATI+GP  +PY+ G+F L+I+ P +YP KPPKV+F T+IYHPNINS G+IC DIL+  WSPA T+S VL++ICS+L DPNPDDPL  EIAR+YK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFA
         +R ++++IAREWTQK+A
Subjt:  NNRPQFDKIAREWTQKFA

P62838 Ubiquitin-conjugating enzyme E2 D22.0e-4061.86Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D   W+ATI+GP  +PY+ G+F L+I+ P +YP KPPKV+F T+IYHPNINS G+IC DIL+  WSPA T+S VL++ICS+L DPNPDDPL  EIAR+YK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFA
         +R ++++IAREWTQK+A
Subjt:  NNRPQFDKIAREWTQKFA

P62839 Ubiquitin-conjugating enzyme E2 D22.0e-4061.86Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D   W+ATI+GP  +PY+ G+F L+I+ P +YP KPPKV+F T+IYHPNINS G+IC DIL+  WSPA T+S VL++ICS+L DPNPDDPL  EIAR+YK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFA
         +R ++++IAREWTQK+A
Subjt:  NNRPQFDKIAREWTQKFA

Q1RMX2 Ubiquitin-conjugating enzyme E2 D22.0e-4061.86Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D   W+ATI+GP  +PY+ G+F L+I+ P +YP KPPKV+F T+IYHPNINS G+IC DIL+  WSPA T+S VL++ICS+L DPNPDDPL  EIAR+YK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFA
         +R ++++IAREWTQK+A
Subjt:  NNRPQFDKIAREWTQKFA

Arabidopsis top hitse value%identityAlignment
AT1G64230.1 ubiquitin-conjugating enzyme 281.5e-4058.47Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D   W+ATI+GP  +PY  G+F ++I+ PP+YP KPPKV+F+TK++HPN+NS G+IC DILK  WSPA T+S VL++ICS+L DPNPDDPL  EIA +YK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFA
         +R +++  AR WTQK+A
Subjt:  NNRPQFDKIAREWTQKFA

AT1G64230.2 ubiquitin-conjugating enzyme 281.5e-4058.47Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D   W+ATI+GP  +PY  G+F ++I+ PP+YP KPPKV+F+TK++HPN+NS G+IC DILK  WSPA T+S VL++ICS+L DPNPDDPL  EIA +YK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFA
         +R +++  AR WTQK+A
Subjt:  NNRPQFDKIAREWTQKFA

AT2G16740.1 ubiquitin-conjugating enzyme 291.2e-4059.32Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D   W+ATI+GP  +PY  G+F ++I+ PP+YP KPPKV F+TK++HPNINS GNIC DILK  WSPA T+S VL++ICS+L DPNPDDPL  EIA +YK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFA
         ++ +++ +AR WTQK+A
Subjt:  NNRPQFDKIAREWTQKFA

AT3G08690.1 ubiquitin-conjugating enzyme 118.2e-4262.71Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D   W+ATI+GP  +PY  G+F +SI+ PP+YP KPPKVSFKTK+YHPNINS G+IC DILK  WSPA T+S VL++ICS+L DPNPDDPL  EIA +YK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFA
         +R +++  AR WTQK+A
Subjt:  NNRPQFDKIAREWTQKFA

AT3G08690.2 ubiquitin-conjugating enzyme 118.2e-4262.71Show/hide
Query:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK
        D   W+ATI+GP  +PY  G+F +SI+ PP+YP KPPKVSFKTK+YHPNINS G+IC DILK  WSPA T+S VL++ICS+L DPNPDDPL  EIA +YK
Subjt:  DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNIC-DILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYK

Query:  NNRPQFDKIAREWTQKFA
         +R +++  AR WTQK+A
Subjt:  NNRPQFDKIAREWTQKFA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GACTGCAATCAGTGGGAGGCAACCATCATTGGACCAGAAGGTACCCCTTACGAGAGAGGTTTATTCAAACTTTCCATATATTTGCCTCCCGAGTATCCAATGAAGCCACC
AAAAGTTAGCTTCAAAACTAAAATTTACCATCCTAACATCAATAGTAAAGGTAATATTTGCGACATTCTCAAGGGAAATTGGAGTCCTGCCTTTACACTTTCAAGTGTGT
TGGTTGCAATCTGCTCAATGCTGCCCGATCCAAATCCAGATGATCCACTTGAAATAGAGATTGCAAGGCTTTACAAGAACAATAGGCCTCAATTTGACAAGATTGCTCGT
GAATGGACACAAAAATTTGCTCAT
mRNA sequenceShow/hide mRNA sequence
GACTGCAATCAGTGGGAGGCAACCATCATTGGACCAGAAGGTACCCCTTACGAGAGAGGTTTATTCAAACTTTCCATATATTTGCCTCCCGAGTATCCAATGAAGCCACC
AAAAGTTAGCTTCAAAACTAAAATTTACCATCCTAACATCAATAGTAAAGGTAATATTTGCGACATTCTCAAGGGAAATTGGAGTCCTGCCTTTACACTTTCAAGTGTGT
TGGTTGCAATCTGCTCAATGCTGCCCGATCCAAATCCAGATGATCCACTTGAAATAGAGATTGCAAGGCTTTACAAGAACAATAGGCCTCAATTTGACAAGATTGCTCGT
GAATGGACACAAAAATTTGCTCAT
Protein sequenceShow/hide protein sequence
DCNQWEATIIGPEGTPYERGLFKLSIYLPPEYPMKPPKVSFKTKIYHPNINSKGNICDILKGNWSPAFTLSSVLVAICSMLPDPNPDDPLEIEIARLYKNNRPQFDKIAR
EWTQKFAH