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MS022671 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022671
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUbiquitin-conjugating enzyme E2
Genome locationscaffold1354:146647..146887
RNA-Seq ExpressionMS022671
SyntenyMS022671
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG9019769.1 Ubiquitin-conjugating enzyme E2 4 [Tulasnella sp. 427]3.4e-1756.63Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLP---PNKPPKVSFKTKIYHRNINSKGNICV
        RI K+  ++ RDPP++CS G   DSN  +W+A I GPEGSPY+ G+FKL +  P   P KPPKV F TKIYH NINS G+IC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLP---PNKPPKVSFKTKIYHRNINSKGNICV

KIO23687.1 hypothetical protein M407DRAFT_244708 [Tulasnella calospora MUT 4182]9.9e-1754.22Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLP---PNKPPKVSFKTKIYHRNINSKGNICV
        RI K+ +++ RDPP++CS G  +D N  +W+A I GP+GSPY  G+FKL +  P   P KPPKV F TKIYH NINS G+IC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLP---PNKPPKVSFKTKIYHRNINSKGNICV

RWR85979.1 ubiquitin-conjugating enzyme E2 10-like protein [Cinnamomum micranthum f. kanehirae]2.0e-1751.81Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV
        RI+K+  +L RDPP++CS G +SD +   W+A I+GP  SPY  G+F + I+ PP+   KPPK++FKTK++H NINS GNIC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV

XP_011460443.1 PREDICTED: ubiquitin-conjugating enzyme E2 11-like [Fragaria vesca subsp. vesca]1.2e-1754.22Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV
        RILK+  +L RDPP+NCS G +S  N   W+A I+GP  SPY  G+F++ I+ PP+   KPPKVSFKTK++H N+NS G+IC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV

XP_022157782.1 ubiquitin-conjugating enzyme E2 11-like [Momordica charantia]3.5e-3079.52Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV
        RILK+ND+L RDPPSNCSGGIISDS+ NQW+A I+GPEG+PYERGLFKL IYLPP    KPPKV+FKTKIYH NINSKGNIC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV

TrEMBL top hitse value%identityAlignment
A0A061SN75 Ubiquitin-conjugating enzyme E2 D/E3.7e-1751.81Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV
        RI+K+  +LL+DPP++CS G  + ++   W+A I+GPEG+PY+ G+F + I  PP+   KPPKVSF TK+YH NINS G+IC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV

A0A3S3QJA8 Ubiquitin-conjugating enzyme E2 10-like protein9.6e-1851.81Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV
        RI+K+  +L RDPP++CS G +SD +   W+A I+GP  SPY  G+F + I+ PP+   KPPK++FKTK++H NINS GNIC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV

A0A6J1DVE6 ubiquitin-conjugating enzyme E2 11-like1.7e-3079.52Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV
        RILK+ND+L RDPPSNCSGGIISDS+ NQW+A I+GPEG+PYERGLFKL IYLPP    KPPKV+FKTKIYH NINSKGNIC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV

A0A7S2TRS7 Hypothetical protein2.8e-1755.42Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV
        RI ++   + RDPP+NCS G +SDSN   W+A I+GP GSPY+ GLF L I  PP+   KPP + F+T+IYH NINSKG IC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV

A0A7S4DXB5 Hypothetical protein2.8e-1755.42Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV
        RI ++   + RDPP+NCS G +SDSN   W+A I+GP GSPY+ GLF L I  PP+   KPP + F+T+IYH NINSKG IC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV

SwissProt top hitse value%identityAlignment
P15731 Ubiquitin-conjugating enzyme E2 42.7e-1753.01Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLP---PNKPPKVSFKTKIYHRNINSKGNICV
        RI K+  +L RDPP++CS G + D +   W+A I+GP  SPY  G+F L I+ P   P KPPK+SF TKIYH NIN+ GNIC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLP---PNKPPKVSFKTKIYHRNINSKGNICV

P35134 Ubiquitin-conjugating enzyme E2 111.1e-1854.22Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV
        RILK+  +L +DPPSNCS G +++ +   W+A I+GP  SPY  G+F + I+ PP+   KPPKVSFKTK+YH NINS G+IC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV

P62837 Ubiquitin-conjugating enzyme E2 D26.0e-1751.81Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLP---PNKPPKVSFKTKIYHRNINSKGNICV
        RI K+ ++L RDPP+ CS G + D +   W+A I+GP  SPY+ G+F L I+ P   P KPPKV+F T+IYH NINS G+IC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLP---PNKPPKVSFKTKIYHRNINSKGNICV

Q1RMX2 Ubiquitin-conjugating enzyme E2 D26.0e-1751.81Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLP---PNKPPKVSFKTKIYHRNINSKGNICV
        RI K+ ++L RDPP+ CS G + D +   W+A I+GP  SPY+ G+F L I+ P   P KPPKV+F T+IYH NINS G+IC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLP---PNKPPKVSFKTKIYHRNINSKGNICV

Q9Y2X8 Ubiquitin-conjugating enzyme E2 D44.6e-1753.01Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLP---PNKPPKVSFKTKIYHRNINSKGNICV
        RI K+  +L RDPP+ CS G + D +   W+A I+GP  SPY+ G+F L I+ P   P KPPKV+F TKIYH NINS G+IC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLP---PNKPPKVSFKTKIYHRNINSKGNICV

Arabidopsis top hitse value%identityAlignment
AT1G64230.1 ubiquitin-conjugating enzyme 285.6e-1846.99Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV
        RILK+  +L +DPP++CS G +++ +   W+A I+GP  SPY  G+F + I+ PP+   KPPKV+F+TK++H N+NS G+IC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV

AT3G08690.1 ubiquitin-conjugating enzyme 117.8e-2054.22Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV
        RILK+  +L +DPPSNCS G +++ +   W+A I+GP  SPY  G+F + I+ PP+   KPPKVSFKTK+YH NINS G+IC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV

AT3G08690.2 ubiquitin-conjugating enzyme 117.8e-2054.22Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV
        RILK+  +L +DPPSNCS G +++ +   W+A I+GP  SPY  G+F + I+ PP+   KPPKVSFKTK+YH NINS G+IC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV

AT4G27960.1 ubiquitin conjugating enzyme 94.3e-1848.19Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV
        RILK+  +L +DPP++CS G +++ +   W+A I+GP  SPY  G+F + I+ PP+   KPPKV+F+TK++H NINS G+IC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV

AT4G27960.2 ubiquitin conjugating enzyme 94.3e-1848.19Show/hide
Query:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV
        RILK+  +L +DPP++CS G +++ +   W+A I+GP  SPY  G+F + I+ PP+   KPPKV+F+TK++H NINS G+IC+
Subjt:  RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPN---KPPKVSFKTKIYHRNINSKGNICV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGAATTCTAAAGAAAAATGATAATCTTCTAAGAGACCCACCATCAAATTGCAGTGGTGGGATCATCAGCGACAGTAACTGCAACCAGTGGAAGGCAATTATCGTTGGACC
TGAAGGCAGCCCTTACGAGAGAGGTTTATTCAAACTTTTCATATATCTACCTCCCAATAAGCCGCCAAAAGTTAGCTTCAAAACTAAAATTTACCATCGCAACATCAATA
GTAAAGGTAATATTTGTGTT
mRNA sequenceShow/hide mRNA sequence
CGAATTCTAAAGAAAAATGATAATCTTCTAAGAGACCCACCATCAAATTGCAGTGGTGGGATCATCAGCGACAGTAACTGCAACCAGTGGAAGGCAATTATCGTTGGACC
TGAAGGCAGCCCTTACGAGAGAGGTTTATTCAAACTTTTCATATATCTACCTCCCAATAAGCCGCCAAAAGTTAGCTTCAAAACTAAAATTTACCATCGCAACATCAATA
GTAAAGGTAATATTTGTGTT
Protein sequenceShow/hide protein sequence
RILKKNDNLLRDPPSNCSGGIISDSNCNQWKAIIVGPEGSPYERGLFKLFIYLPPNKPPKVSFKTKIYHRNINSKGNICV