CuGenDBv2

Gene ID	MS022676
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Integrator complex subunit 7
Genome location	scaffold1354:207919..215035
RNA-Seq Expression	MS022676
Synteny	MS022676
Gene Ontology terms	GO:0016180 - snRNA processing (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0032039 - integrator complex (cellular component)
InterPro domains	IPR016024 - Armadillo-type fold IPR033060 - Integrator complex subunit 7

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6600845.1 Integrator complex subunit 7-like protein, partial [Cucurbita argyrosperma subsp. sororia]

2.1e-107

86.38

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Query:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR
        MERNAAACAMEWSIELEKALRSKK GRA EAILQIGSRLQQWSREPEPN+AVYNMFDLVTWEDRLFSNTILLRLA+AFK DDKHIR AVV+VFLSEL SR
Subjt:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR

Query:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML
        D+T+SKQYQG+LSKARVQNHHELLTRVKVVL GGDPE+RALAL+L GCWAHFA+ S QIRY+ILSS+LS HISEVKASIFAAACI +LADDFAQVFL +L
Subjt:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML

Query:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYK
        VNIMT +T+LAI+MAGARV  KLGCSHSMAK AYK
Subjt:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYK

XP_022157776.1 uncharacterized protein LOC111024400 [Momordica charantia]

2.5e-124

99.57

Show/hide

Query:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR
        MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR
Subjt:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR

Query:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML
        DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML
Subjt:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML

Query:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYK
        VNIMTPS NLAIRMAGARVLPKLGCSHSMAKMAYK
Subjt:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYK

XP_022942067.1 uncharacterized protein LOC111447255 [Cucurbita moschata]

2.1e-107

86.38

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Query:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR
        MERNAAACAMEWSIELEKALRSKK GRA EAILQIGSRLQQWSREPEPN+AVYNMFDLVTWEDRLFSNTILLRLA+AFK DDKHIR AVV+VFLSEL SR
Subjt:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR

Query:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML
        D+T+SKQYQG+LSKARVQNHHELLTRVKVVL GGDPE+RALAL+L GCWAHFA+ S QIRY+ILSS+LS HISEVKASIFAAACI +LADDFAQVFL +L
Subjt:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML

Query:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYK
        VNIMT +T+LAI+MAGARV  KLGCSHSMAK AYK
Subjt:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYK

XP_038892419.1 uncharacterized protein LOC120081531 isoform X1 [Benincasa hispida]

3.3e-108

86.38

Show/hide

Query:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR
        MERN+AACAMEWSIELEKALRSKK G+A EAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLA+AFKFDDK+IR AVVRVFLSELYSR
Subjt:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR

Query:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML
        D  RSKQYQGILSKAR+QNHHELL+RVKVVL+GGDPE+RALAL+L GCWAHFAKDS QIRYLI SS+ S H+SEVKASIFAAACI +LADDFAQVFL +L
Subjt:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML

Query:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYK
        VNIMT +T++AIRMAGARV  KLGCSHS+AKMAYK
Subjt:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYK

XP_038892420.1 uncharacterized protein LOC120081531 isoform X2 [Benincasa hispida]

3.3e-108

86.38

Show/hide

Query:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR
        MERN+AACAMEWSIELEKALRSKK G+A EAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLA+AFKFDDK+IR AVVRVFLSELYSR
Subjt:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR

Query:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML
        D  RSKQYQGILSKAR+QNHHELL+RVKVVL+GGDPE+RALAL+L GCWAHFAKDS QIRYLI SS+ S H+SEVKASIFAAACI +LADDFAQVFL +L
Subjt:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML

Query:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYK
        VNIMT +T++AIRMAGARV  KLGCSHS+AKMAYK
Subjt:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KJG8 Uncharacterized protein

2.3e-107

86.08

Show/hide

Query:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR
        MER++AACAMEWSIELEKALR KK GRA EAI QIG RLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLA+AFKFDDKHIR AVVRVFLSELYSR
Subjt:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR

Query:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML
        D +RSKQYQGILSKARVQNHHELLTRVKVVL+GGDPE+R LAL+L GCWAHFAKDS QIRYLI SSL S H+SEVKASIFAAACI +LADDFAQVFL +L
Subjt:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML

Query:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYKVI
        VNIMT +T+L IRMAGARV  KLGCSHSMAK AYKV+
Subjt:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYKVI

A0A5A7TH30 Integrator complex subunit 7

2.8e-105

84.39

Show/hide

Query:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR
        MERN+AACAMEWSIELEKALR KK GRA EAI QIG RLQQWSREPEPN+AVYNMFDLVTWED+LFSNTILLRLA+AFK DDKHIR AVVRVFLSELYSR
Subjt:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR

Query:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML
        D +RSKQYQGILSKARVQN HELLTRVKVVL GGDPE++ALAL++ GCWAHFAKDS QIRYLI  SL S H+SEVKASIFAAACI +LADDFAQVFL +L
Subjt:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML

Query:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYKVI
        VNIMT +T+LAIRMAGARV  KLGCSHSMAK AYKV+
Subjt:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYKVI

A0A6J1DXI9 uncharacterized protein LOC111024400

1.2e-124

99.57

Show/hide

Query:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR
        MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR
Subjt:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR

Query:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML
        DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML
Subjt:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML

Query:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYK
        VNIMTPS NLAIRMAGARVLPKLGCSHSMAKMAYK
Subjt:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYK

A0A6J1FP76 uncharacterized protein LOC111447255

1.0e-107

86.38

Show/hide

Query:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR
        MERNAAACAMEWSIELEKALRSKK GRA EAILQIGSRLQQWSREPEPN+AVYNMFDLVTWEDRLFSNTILLRLA+AFK DDKHIR AVV+VFLSEL SR
Subjt:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR

Query:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML
        D+T+SKQYQG+LSKARVQNHHELLTRVKVVL GGDPE+RALAL+L GCWAHFA+ S QIRY+ILSS+LS HISEVKASIFAAACI +LADDFAQVFL +L
Subjt:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML

Query:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYK
        VNIMT +T+LAI+MAGARV  KLGCSHSMAK AYK
Subjt:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYK

A0A6J1JBG3 uncharacterized protein LOC111485260

1.6e-105

85.11

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Query:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR
        MERNAAA AMEWSIELEKALRSKK GRA EAILQIGSRLQQWSREPEPN+AVYNMFDLVTWEDRLFSNTILLRLA+AFK DDKHIR AVVRVFLSEL SR
Subjt:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSR

Query:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML
        D+T+S+QYQG+LSKARVQNHHELLTRVKVVL GGDPE+RALAL+L GCWAHFA+ S QIRY+IL SLLS HISEVKASIFAAACI +LADDFA+VFL +L
Subjt:  DKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTML

Query:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYK
        VNIMT +T+LA++MAGARV  KLGCSHSMAK AYK
Subjt:  VNIMTPSTNLAIRMAGARVLPKLGCSHSMAKMAYK

SwissProt top hits

e value

%identity

Alignment

Q54PL2 Integrator complex subunit 7 homolog

5.4e-05

22.22

Show/hide

Query:  IELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVF---LSELYSRDKTRSKQYQG
        +E+ K +RS   G   E+IL     ++     P P                L  N+++ RL++ F+     +++ +++VF    SE++            
Subjt:  IELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVF---LSELYSRDKTRSKQYQG

Query:  ILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGEL----ADDFAQVFLTMLVNIMTP
             +V N  E+L R+  V+   DP +R+L+L + G   H   D   I + I + + S    E++A+IF    + E+    +D   +   T++ N+ TP
Subjt:  ILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGEL----ADDFAQVFLTMLVNIMTP

Query:  STNLAIRMAGARVLPKLGCSHSMAKMAYKVISDL
              ++   R+   +  SHS+A  + +++  L
Subjt:  STNLAIRMAGARVLPKLGCSHSMAKMAYKVISDL

Arabidopsis top hits

e value

%identity

Alignment

AT4G20060.1 ARM repeat superfamily protein

9.7e-66

55.79

Show/hide

Query:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSEL-YS
        ME+ +AACAMEWSI+LEK+LRSK S +A EAIL+ G +L+QWS+EPE  +AVYN+F LV  ED+LFSNTILLRL +AF   DK I+ AVVRVF+S    S
Subjt:  MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSEL-YS

Query:  RDKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTM
        R K  ++     LSK RV NH ELLTRVK V D GD ES+ALAL+LFGCW  FA +   +RYL+ SS++SPH  E ++++FAAAC  E+ADDFA V L M
Subjt:  RDKTRSKQYQGILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTM

Query:  LVNIMT-PSTNLAIRMAGARVLPKLGCSHSMAKMAYKVISDL
        L +++  P      R+A  RV  K+GCSH++A  A+K+   L
Subjt:  LVNIMT-PSTNLAIRMAGARVLPKLGCSHSMAKMAYKVISDL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGAGGAATGCTGCAGCTTGTGCCATGGAATGGAGTATTGAGCTAGAGAAGGCTCTTCGTTCCAAGAAATCAGGTCGAGCTGCTGAAGCCATACTTCAGATTGGGTC
TCGACTTCAGCAATGGAGTAGAGAGCCAGAACCAAATGTAGCAGTGTATAATATGTTTGACCTTGTTACTTGGGAAGATAGGCTATTTTCCAACACAATTCTCTTACGGC
TTGCTGAGGCATTTAAGTTTGATGACAAGCACATTAGACATGCAGTCGTTAGGGTATTCTTATCAGAGCTCTACAGCCGTGACAAGACGAGAAGTAAACAATATCAAGGA
ATTCTTTCAAAGGCCAGGGTGCAAAACCACCATGAATTACTGACTAGAGTGAAGGTTGTTCTTGATGGAGGGGATCCCGAGTCTAGGGCACTAGCTTTGGTTCTATTTGG
ATGTTGGGCGCATTTTGCAAAAGACAGTACCCAGATACGTTATTTGATACTTTCTAGTCTGTTATCTCCCCATATCTCAGAGGTAAAAGCATCTATATTTGCTGCAGCAT
GCATTGGTGAGTTAGCAGATGACTTTGCACAAGTCTTCTTAACGATGTTGGTTAATATAATGACTCCGTCTACAAATTTGGCCATTAGAATGGCTGGAGCTCGAGTGTTA
CCAAAGTTGGGATGCTCACATTCAATGGCAAAAATGGCCTACAAGGTTATTTCTGATTTA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MERNAAACAMEWSIELEKALRSKKSGRAAEAILQIGSRLQQWSREPEPNVAVYNMFDLVTWEDRLFSNTILLRLAEAFKFDDKHIRHAVVRVFLSELYSRDKTRSKQYQG
ILSKARVQNHHELLTRVKVVLDGGDPESRALALVLFGCWAHFAKDSTQIRYLILSSLLSPHISEVKASIFAAACIGELADDFAQVFLTMLVNIMTPSTNLAIRMAGARVL
PKLGCSHSMAKMAYKVISDL

MS022676 (gene) of Bitter gourd (TR) v1 genome