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MS022678 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022678
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUDP-3-O-acyl-N-acetylglucosamine deacetylase
Genome locationscaffold1354:236471..236635
RNA-Seq ExpressionMS022678
SyntenyMS022678
Gene Ontology termsGO:0009245 - lipid A biosynthetic process (biological process)
GO:2001289 - lipid X metabolic process (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008759 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity (molecular function)
GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0103117 - UDP-3-O-acyl-N-acetylglucosamine deacetylase activity (molecular function)
InterPro domainsIPR004463 - UDP-3-O-acyl N-acetylglucosamine deacetylase
IPR011334 - UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal
IPR020568 - Ribosomal protein S5 domain 2-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157772.1 probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 2 isoform X1 [Momordica charantia]1.0e-2097.96Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
        SA RGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK

XP_022157773.1 probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 2 isoform X2 [Momordica charantia]5.9e-2190.57Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYKVSSM
        SA RGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK+  +
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYKVSSM

XP_022157774.1 probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 2 isoform X3 [Momordica charantia]1.0e-2097.96Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
        SA RGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK

XP_022157775.1 probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 2 isoform X4 [Momordica charantia]1.0e-2097.96Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
        SA RGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK

XP_023517781.1 probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 2, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]1.1e-1984.91Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYKVSSM
        S  +GWINPPLRFHDEPCRHKVLD IGD+SLFAR GSQGLP+AHIVVYKVSS+
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYKVSSM

TrEMBL top hitse value%identityAlignment
A0A2P5E8E4 UDP-3-O-acyl-N-acetylglucosamine deacetylase9.2e-2089.8Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
        SA +GW+NPPLRFHDEPCRHKVLDLIGDLSLFARFGSQG+P+AHIVVYK
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK

A0A6J1DU17 UDP-3-O-acyl-N-acetylglucosamine deacetylase4.9e-2197.96Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
        SA RGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK

A0A6J1DUA3 UDP-3-O-acyl-N-acetylglucosamine deacetylase2.9e-2190.57Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYKVSSM
        SA RGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK+  +
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYKVSSM

A0A6J1DVD4 UDP-3-O-acyl-N-acetylglucosamine deacetylase4.9e-2197.96Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
        SA RGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK

A0A6J1DXI5 UDP-3-O-acyl-N-acetylglucosamine deacetylase4.9e-2197.96Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
        SA RGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK

SwissProt top hitse value%identityAlignment
F4IAT8 Probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial4.6e-1673.47Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
        SA  GW+NPPLRF DE CRHK+LDLIGDLSL +R G+ GLP+AHIV YK
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK

F4IAW1 Probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 5, mitochondrial4.6e-1673.47Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
        SA  GW+NPPLRF DE CRHK+LDLIGDLSL +R G+ GLP+AHIV YK
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK

P0DKB7 Probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 2, mitochondrial4.6e-1673.47Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
        SA  GW+NPPLRF DE CRHK+LDLIGDLSL +R G+ GLP+AHIV YK
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK

P0DKB8 Probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 3, mitochondrial4.6e-1673.47Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
        SA  GW+NPPLRF DE CRHK+LDLIGDLSL +R G+ GLP+AHIV YK
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK

P0DKB9 Probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 4, mitochondrial4.6e-1673.47Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
        SA  GW+NPPLRF DE CRHK+LDLIGDLSL +R G+ GLP+AHIV YK
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK

Arabidopsis top hitse value%identityAlignment
AT1G24793.1 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein3.2e-1773.47Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
        SA  GW+NPPLRF DE CRHK+LDLIGDLSL +R G+ GLP+AHIV YK
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK

AT1G24880.1 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein3.2e-1773.47Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
        SA  GW+NPPLRF DE CRHK+LDLIGDLSL +R G+ GLP+AHIV YK
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK

AT1G25054.1 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein3.2e-1773.47Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
        SA  GW+NPPLRF DE CRHK+LDLIGDLSL +R G+ GLP+AHIV YK
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK

AT1G25054.2 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein3.2e-1773.47Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
        SA  GW+NPPLRF DE CRHK+LDLIGDLSL +R G+ GLP+AHIV YK
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK

AT1G25210.1 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein3.2e-1773.47Show/hide
Query:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK
        SA  GW+NPPLRF DE CRHK+LDLIGDLSL +R G+ GLP+AHIV YK
Subjt:  SAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCACCAGTGCCGGTAGAGGTTGGATCAATCCCCCATTGCGTTTCCATGATGAACCCTGTCGCCACAAGGTTTTAGATCTTATTGGCGACCTCTCACTTTTTGCACGGTT
TGGTAGTCAAGGGCTTCCGATGGCACACATAGTGGTTTACAAGGTAAGTTCTATG
mRNA sequenceShow/hide mRNA sequence
TTCACCAGTGCCGGTAGAGGTTGGATCAATCCCCCATTGCGTTTCCATGATGAACCCTGTCGCCACAAGGTTTTAGATCTTATTGGCGACCTCTCACTTTTTGCACGGTT
TGGTAGTCAAGGGCTTCCGATGGCACACATAGTGGTTTACAAGGTAAGTTCTATG
Protein sequenceShow/hide protein sequence
FTSAGRGWINPPLRFHDEPCRHKVLDLIGDLSLFARFGSQGLPMAHIVVYKVSSM