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MS022693 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022693
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold41:28428..28604
RNA-Seq ExpressionMS022693
SyntenyMS022693
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]1.1e-0450Show/hide
Query:  DCQTIKRVLKFYEKA-LGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL
        +C++IK +L+ YEKA  GQ IN +KS F+ SKNT + M+  I  EL V      GQYLGL
Subjt:  DCQTIKRVLKFYEKA-LGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL

XP_030940268.1 uncharacterized protein LOC115965235 [Quercus lobata]2.4e-0449.15Show/hide
Query:  DCQTIKRVLKFYEKALGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL
        DCQTI+ +L+ YE A GQ IN  K+    S NT     E I + L VPV+ +F QYLGL
Subjt:  DCQTIKRVLKFYEKALGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL

XP_030964568.1 uncharacterized protein LOC115985808 [Quercus lobata]1.9e-0445.76Show/hide
Query:  DCQTIKRVLKFYEKALGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL
        DC+ I   L  YE+A GQ IN +K+Q   S NT  +M  YI   L VP ++Q+ +YLGL
Subjt:  DCQTIKRVLKFYEKALGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL

XP_031111882.1 uncharacterized protein LOC116015853 [Ipomoea triloba]3.2e-0445.76Show/hide
Query:  DCQTIKRVLKFYEKALGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL
        + QTIK+ L  Y  A GQ +NF+KS  + S NT   M E + S   V V + FG+YLGL
Subjt:  DCQTIKRVLKFYEKALGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL

XP_031131672.1 uncharacterized protein LOC116033057 [Ipomoea triloba]7.1e-0442.37Show/hide
Query:  DCQTIKRVLKFYEKALGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL
        + Q ++  L  Y +A GQ +NFEKS  M S NT  +M +++ S  +V  V  FG+YLGL
Subjt:  DCQTIKRVLKFYEKALGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL

TrEMBL top hitse value%identityAlignment
A0A2N9EK17 Reverse transcriptase domain-containing protein6.9e-0549.15Show/hide
Query:  DCQTIKRVLKFYEKALGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL
        D   +K +L  YE A GQ +NFEKS F  SKNT Q + E I + L   + S FG+YLGL
Subjt:  DCQTIKRVLKFYEKALGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL

A0A2N9ESR2 Uncharacterized protein2.0e-0445.76Show/hide
Query:  DCQTIKRVLKFYEKALGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL
        +CQ I+ +L  YEKA GQ +N EK+    S+NT Q M E +   L VP + Q+ +YLGL
Subjt:  DCQTIKRVLKFYEKALGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL

A0A2N9EUG0 Uncharacterized protein2.6e-0445.76Show/hide
Query:  DCQTIKRVLKFYEKALGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL
        +CQ I+ +L  YE A GQ +N EK+    SKNT Q   E I  +LNVP +  + +YLGL
Subjt:  DCQTIKRVLKFYEKALGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL

A0A2N9I9F4 Reverse transcriptase domain-containing protein2.0e-0445.76Show/hide
Query:  DCQTIKRVLKFYEKALGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL
        +CQ I+ +L  YEKA GQ +N EK+    S+NT Q M E +   L VP + Q+ +YLGL
Subjt:  DCQTIKRVLKFYEKALGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL

A0A6J1DUG8 uncharacterized protein LOC1110241355.3e-0550Show/hide
Query:  DCQTIKRVLKFYEKA-LGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL
        +C++IK +L+ YEKA  GQ IN +KS F+ SKNT + M+  I  EL V      GQYLGL
Subjt:  DCQTIKRVLKFYEKA-LGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATTGCCAAACTATTAAGAGGGTGCTTAAGTTCTATGAGAAAGCGTTAGGTCAAACTATAAATTTTGAGAAGTCACAATTCATGACCAGCAAGAATACGTGTCAAAATAT
GATTGAATATATCTGGTCAGAATTAAATGTTCCTGTAGTTTCTCAGTTTGGTCAATATCTAGGTCTT
mRNA sequenceShow/hide mRNA sequence
GATTGCCAAACTATTAAGAGGGTGCTTAAGTTCTATGAGAAAGCGTTAGGTCAAACTATAAATTTTGAGAAGTCACAATTCATGACCAGCAAGAATACGTGTCAAAATAT
GATTGAATATATCTGGTCAGAATTAAATGTTCCTGTAGTTTCTCAGTTTGGTCAATATCTAGGTCTT
Protein sequenceShow/hide protein sequence
DCQTIKRVLKFYEKALGQTINFEKSQFMTSKNTCQNMIEYIWSELNVPVVSQFGQYLGL