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MS022702 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022702
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDDE Tnp4 domain-containing protein
Genome locationscaffold41:200944..201069
RNA-Seq ExpressionMS022702
SyntenyMS022702
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBG92471.1 hypothetical protein Prudu_000221 [Prunus dulcis]5.9e-0558.54Show/hide
Query:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHH
        MDRQ+F+KLC +L  +G+L+ ++NM+ EE++AIFL+ILAHH
Subjt:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHH
BBH01277.1 hypothetical protein Prudu_011498 [Prunus dulcis]5.9e-0558.54Show/hide
Query:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHH
        MDRQ+F+KLC +L  +G+L+ ++NM+ EE++AIFL+ILAHH
Subjt:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHH
VVA31425.1 PREDICTED: ALP1 [Prunus dulcis]1.2e-0559.52Show/hide
Query:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHHV
        MDRQ+F+KLC +L   GQL+ ++N+++EE+IA+FLHILAHH+
Subjt:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHHV
XP_020419691.1 protein ALP1-like isoform X2 [Prunus persica]5.9e-0558.54Show/hide
Query:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHH
        MDRQ+F+KLC +L  +G+L+ ++NM+ EE++AIFL+ILAHH
Subjt:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHH
XP_021808928.1 protein ALP1-like [Prunus avium]1.2e-0559.52Show/hide
Query:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHHV
        MDRQ+F+KLC +L   GQL+ ++N+++EE+IA+FLHILAHH+
Subjt:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHHV
TrEMBL top hitse value%identityAlignment
A0A4Y1QKY9 Uncharacterized protein2.9e-0558.54Show/hide
Query:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHH
        MDRQ+F+KLC +L  +G+L+ ++NM+ EE++AIFL+ILAHH
Subjt:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHH
A0A4Y1RBD7 Uncharacterized protein2.9e-0558.54Show/hide
Query:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHH
        MDRQ+F+KLC +L  +G+L+ ++NM+ EE++AIFL+ILAHH
Subjt:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHH
A0A5E4FV61 PREDICTED: ALP15.8e-0659.52Show/hide
Query:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHHV
        MDRQ+F+KLC +L   GQL+ ++N+++EE+IA+FLHILAHH+
Subjt:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHHV
A0A6P5S572 protein ALP1-like5.8e-0659.52Show/hide
Query:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHHV
        MDRQ+F+KLC +L   GQL+ ++N+++EE+IA+FLHILAHH+
Subjt:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHHV
M5WDE8 Uncharacterized protein2.9e-0558.54Show/hide
Query:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHH
        MDRQ+F+KLC +L  +G+L+ ++NM+ EE++AIFL+ILAHH
Subjt:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)2.4e-0442.86Show/hide
Query:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHHV
        MD+  FYKLC LL+  G L+ +  + +E  +AIFL I+ H++
Subjt:  MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHHV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGACAAACATTTTATAAGTTATGTACTCTCCTTAGGATTGAAGGACAATTAAAAAGGTCAAAGAATATGACTCTAGAAGAAATTATTGCAATATTTTTACATAT
TCTAGCACACCATGTA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGACAAACATTTTATAAGTTATGTACTCTCCTTAGGATTGAAGGACAATTAAAAAGGTCAAAGAATATGACTCTAGAAGAAATTATTGCAATATTTTTACATAT
TCTAGCACACCATGTA
Protein sequenceShow/hide protein sequence
MDRQTFYKLCTLLRIEGQLKRSKNMTLEEIIAIFLHILAHHV