| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7011066.1 RGG repeats nuclear RNA binding protein B [Cucurbita argyrosperma subsp. argyrosperma] | 3.4e-149 | 84.7 | Show/hide |
Query: MATVNPFDLLGDDDAEDPSQLIAAKQVAAA----PKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDT
MATVNPFDLLGDDDAEDPSQLIAAKQVAA PKKG AQ KP S + QNKPA+LPSKPLPP+QA VREAR+E SRGGRGSGR GGGRGYGRGR+
Subjt: MATVNPFDLLGDDDAEDPSQLIAAKQVAAA----PKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDT
Query: GGFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNET
GGFNRD+AN+EN +SAPEDG+AGKTTERRGY PRGRGGRRGGFNNG+A DGERPRR FERHSGTGRGNE+KREGAGRGNWGR DEF+EV EEAVNE
Subjt: GGFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNET
Query: EKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITD
EKN GDEKPVQE+D +GVN ENPAKE EETEPEDKEMTLEEYEKLLE+KRK+LMALK TEERKVD KEFASMQQLSSKKENNDIFIKLGS+KDKRKEI D
Subjt: EKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITD
Query: KEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
KEER KKSLSINEFLRPAEGER Y PGGRGRGRGRGSRGGY GSS+SNVAAPSIEDPGQFPTLGAK
Subjt: KEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
|
|
| XP_022156970.1 RGG repeats nuclear RNA binding protein A-like [Momordica charantia] | 3.2e-179 | 97.53 | Show/hide |
Query: MATVNPFDLLGDDDAEDPSQLIAAKQ---VAAAPKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDTG
MATVNPFDLLGDDDAEDPSQLIAAKQ VAAAPKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQA VREARSE+SRGGRGSGRGGGGRGYGRGRDTG
Subjt: MATVNPFDLLGDDDAEDPSQLIAAKQ---VAAAPKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDTG
Query: GFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNETE
GFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDA DGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNETE
Subjt: GFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNETE
Query: KNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITDK
K+TGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEY+KLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITDK
Subjt: KNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITDK
Query: EERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
EERAKKSLSINEFLRPAEGERQYA GGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
Subjt: EERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
|
|
| XP_022933029.1 RGG repeats nuclear RNA binding protein A-like isoform X2 [Cucurbita moschata] | 9.9e-149 | 84.7 | Show/hide |
Query: MATVNPFDLLGDDDAEDPSQLIAAKQVAAA----PKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDT
MATVNPFDLLGDDDAEDPSQLIAAKQVAA PKKG AQ KP S + QNKPA+LPSKPLPP+QA VREAR+E SRGGRGSGR GGGRGYGRGR+
Subjt: MATVNPFDLLGDDDAEDPSQLIAAKQVAAA----PKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDT
Query: GGFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNET
GGFNRD+AN+EN +SAPEDG+AGKTTERRGY PRGRGGRRGGFNNG+A DGERPRR FERHSGTGRGNE KREGAGRGNWGR DEF+EV EEAVNE
Subjt: GGFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNET
Query: EKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITD
EKN GDEKPVQE+D +GVN+ENPAKE EETEPEDKEMTLEEYEKLLE+KRK+LMALK TEERKVD KEFASMQQLSSKKENNDIFIKLGS+KDKRKEI D
Subjt: EKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITD
Query: KEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
KEER KKSLSINEFLRPAEGER Y PGGRGRGRGRGSRGGY GSS+SNVAAPSIEDPGQFPTLGAK
Subjt: KEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
|
|
| XP_023520985.1 RGG repeats nuclear RNA binding protein A-like isoform X2 [Cucurbita pepo subsp. pepo] | 7.6e-149 | 84.15 | Show/hide |
Query: MATVNPFDLLGDDDAEDPSQLIAAKQVAAA----PKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDT
MATVNPFDLLGDDDAEDPSQLIAAKQVAA PKKG AQ KP S + QNKPA+LPS PLPP+QA VRE+R+E SRGGRG+GR GGGRGYGRGR+
Subjt: MATVNPFDLLGDDDAEDPSQLIAAKQVAAA----PKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDT
Query: GGFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNET
GGFNRD+AN++N +SAPEDG+AGKTTERRGY PRGRGGRRGGFNNG+AADGERPRR FERHSGTGRGN +KREGAGRGNWGR DEF+EVPEEAVNE
Subjt: GGFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNET
Query: EKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITD
EKN GDEKPVQE+D +GVNTENPAKE EETEPEDKEMTLEEYEKLLE+KRK+LMALK TEERKVD KEFASMQQLSSKKENNDIFIKLGS+KDKRKEI D
Subjt: EKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITD
Query: KEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
KEER KKSLSINEFLRPAEGER Y PGGRGRGRGRGSRGGY GSS+SNVAAPSIEDPGQFPTLGAK
Subjt: KEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
|
|
| XP_038874269.1 RGG repeats nuclear RNA binding protein A-like [Benincasa hispida] | 1.3e-148 | 85.25 | Show/hide |
Query: MATVNPFDLLGDDDAEDPSQLIAAKQVA--AAP--KKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDT
MATVNPFDLLGDDDAEDPSQLIAA QVA AAP KKGP AQ KP A NKPA+LPSKPLPPAQA VRE+R+E SRGGRGSGR GGGRGYGRGR+
Subjt: MATVNPFDLLGDDDAEDPSQLIAAKQVA--AAP--KKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDT
Query: GGFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNET
GGFNRD+ANNE+ ++APEDG+ GKT ERRGY PRGRGGRRGGFNNG+AADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEF+EVPEEAVNET
Subjt: GGFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNET
Query: EKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITD
EKN GDEKP+QEDD +GVNTENPAKE EE PEDKEMTLEEYEKLLE+KRK+L+ALK TEERKVD KEFASMQQLSSKK+NN+IFIKLGS+KDKRKEI D
Subjt: EKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITD
Query: KEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
KEER KKSLSINEFLRPAEGER YAPGGRGRGRGRG RGGYSGSSMSNVAAPSIEDPGQFPTLGAK
Subjt: KEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TA33 H/ACA ribonucleoprotein complex subunit 1-like | 5.9e-147 | 83.65 | Show/hide |
Query: MATVNPFDLLGDDDAEDPSQLIAAK--QVAAAP--KKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGG-GRGYGRGRD
MAT+NPFDLLGDDDAEDPSQLIAAK VA AP KKGP AQ KP S A QNKPA+LPSKPLPPAQAVVRE+R+E SRGGRGSGRGGG G GYGRGR+
Subjt: MATVNPFDLLGDDDAEDPSQLIAAK--QVAAAP--KKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGG-GRGYGRGRD
Query: TGGFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNE
GGFNRD AN+EN +APEDG GKTTERRGY PRGRGGRRGGFN+G+ A+GERPRRAFERHSGTGRGNEFKREG+GRGNWGRSTDEF+EV EE VNE
Subjt: TGGFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNE
Query: TEKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEIT
TEKN GDEKP+QE+D +G NT++PAKE EETEPEDKEMTLEEYEKLLE+KRKSL+ALK TEERKVD KEFASMQQLSSKK+NNDIFIKLGS+KDKRKEI
Subjt: TEKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEIT
Query: DKEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
DKEER KKSLSINEFLRPAEGER Y PGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFP LGAK
Subjt: DKEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
|
|
| A0A6J1DRV5 RGG repeats nuclear RNA binding protein A-like | 1.5e-179 | 97.53 | Show/hide |
Query: MATVNPFDLLGDDDAEDPSQLIAAKQ---VAAAPKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDTG
MATVNPFDLLGDDDAEDPSQLIAAKQ VAAAPKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQA VREARSE+SRGGRGSGRGGGGRGYGRGRDTG
Subjt: MATVNPFDLLGDDDAEDPSQLIAAKQ---VAAAPKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDTG
Query: GFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNETE
GFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDA DGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNETE
Subjt: GFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNETE
Query: KNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITDK
K+TGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEY+KLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITDK
Subjt: KNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITDK
Query: EERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
EERAKKSLSINEFLRPAEGERQYA GGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
Subjt: EERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
|
|
| A0A6J1EYL1 RGG repeats nuclear RNA binding protein A-like isoform X2 | 4.8e-149 | 84.7 | Show/hide |
Query: MATVNPFDLLGDDDAEDPSQLIAAKQVAAA----PKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDT
MATVNPFDLLGDDDAEDPSQLIAAKQVAA PKKG AQ KP S + QNKPA+LPSKPLPP+QA VREAR+E SRGGRGSGR GGGRGYGRGR+
Subjt: MATVNPFDLLGDDDAEDPSQLIAAKQVAAA----PKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDT
Query: GGFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNET
GGFNRD+AN+EN +SAPEDG+AGKTTERRGY PRGRGGRRGGFNNG+A DGERPRR FERHSGTGRGNE KREGAGRGNWGR DEF+EV EEAVNE
Subjt: GGFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNET
Query: EKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITD
EKN GDEKPVQE+D +GVN+ENPAKE EETEPEDKEMTLEEYEKLLE+KRK+LMALK TEERKVD KEFASMQQLSSKKENNDIFIKLGS+KDKRKEI D
Subjt: EKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITD
Query: KEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
KEER KKSLSINEFLRPAEGER Y PGGRGRGRGRGSRGGY GSS+SNVAAPSIEDPGQFPTLGAK
Subjt: KEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
|
|
| A0A6J1F3H7 RGG repeats nuclear RNA binding protein A-like isoform X1 | 1.2e-147 | 84.47 | Show/hide |
Query: MATVNPFDLLGDDDAEDPSQLIAAKQVAAA----PKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDT
MATVNPFDLLGDDDAEDPSQLIAAKQVAA PKKG AQ KP S + QNKPA+LPSKPLPP+QA VREAR+E SRGGRGSGR GGGRGYGRGR+
Subjt: MATVNPFDLLGDDDAEDPSQLIAAKQVAAA----PKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDT
Query: GGFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNET
GGFNRD+AN+EN +SAPEDG+AGKTTERRGY PRGRGGRRGGFNNG+A DGERPRR FERHSGTGRGNE KREGAGRGNWGR DEF+EV EEAVNE
Subjt: GGFNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNET
Query: EKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKL-GSDKDKRKEIT
EKN GDEKPVQE+D +GVN+ENPAKE EETEPEDKEMTLEEYEKLLE+KRK+LMALK TEERKVD KEFASMQQLSSKKENNDIFIKL GS+KDKRKEI
Subjt: EKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKL-GSDKDKRKEIT
Query: DKEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
DKEER KKSLSINEFLRPAEGER Y PGGRGRGRGRGSRGGY GSS+SNVAAPSIEDPGQFPTLGAK
Subjt: DKEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
|
|
| A0A6J1I9W0 RGG repeats nuclear RNA binding protein A-like isoform X2 | 3.4e-147 | 84.07 | Show/hide |
Query: MATVNPFDLLGDDDAEDPSQLIAAKQVAA--APKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDTGG
MATVNPFDLLGDDDAEDPSQLIAAKQVAA AP AQ KP A+ QNKPA+LPSKPLPP+QA VREAR+E RGGRGSGR GGGRGYGRGR+ GG
Subjt: MATVNPFDLLGDDDAEDPSQLIAAKQVAA--APKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDTGG
Query: FNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNETEK
FNRD+AN+EN +SAPEDG+AGKTTERRGY PRGRGGRRGGFNNG+ DGERPRR FERHSGTGRGNE+KREGAGRGNWGR DEF+EV EEAVNE EK
Subjt: FNRDYANNENSFSSAPEDGDAGKTTERRGYVAPRGRGGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVNETEK
Query: NTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITDKE
N GDEKPVQE+D +GVNTENPAKE EETEPEDKEMTLEEYEKLLE+KRK+LMALK TEERKVD KEFASMQQLSSKKENNDIFIKLGS+KDKRKEI DKE
Subjt: NTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITDKE
Query: ERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
ER KKSLSINEFLRPAE ERQY PGGR RGRGRGSRGGY GSS+SNVAAPSIEDPGQFPTLGAK
Subjt: ERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLGAK
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| O23523 RGG repeats nuclear RNA binding protein A | 2.0e-75 | 55.53 | Show/hide |
Query: MATVNPFDLLGDDDAEDPSQL-IAAKQVAAAPKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDTGGF
MAT+NPFDLL DDDAEDPSQL +A +++ + K G S+ P LPSKPLPPAQA VREARS++ RGG G G G+ RGR GG+
Subjt: MATVNPFDLLGDDDAEDPSQL-IAAKQVAAAPKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDTGGF
Query: NRDYANN--ENSFSSAPEDGDAGKTT-ERR-GYVAPRGR---------GGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFS
NRD NN ++ +GD K++ ERR G APRG GGRRGGF+N + DGERPRRAFER SGTGRG++FKR+G+GRGNWG +E +
Subjt: NRDYANN--ENSFSSAPEDGDAGKTT-ERR-GYVAPRGR---------GGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFS
Query: EVPEEAVN-ETEKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLG
E ETEK+ G EKP +D AA N E+ +EE EPEDKEMTL+EYEK+LEEK+K+L +L TT ERKVD K F SMQQLS+KK N++IFIKLG
Subjt: EVPEEAVN-ETEKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLG
Query: SDKDKRKEITDKEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMS---NVAAPSIEDPGQFPTLGAK
SDKDKRK+ DKEE+AKK++SINEFL+PAEG Y G GRGRG RGG S N AAP+I D QFP+LG K
Subjt: SDKDKRKEITDKEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMS---NVAAPSIEDPGQFPTLGAK
|
|
| O23593 RGG repeats nuclear RNA binding protein B | 3.6e-61 | 49.48 | Show/hide |
Query: MATVNPFDLLGDDDAEDPSQLIAAKQVAAAPKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDTGGFN
MA+VNPFDLL DDDAEDPSQ++A+K P K A Q K +P+KP PP+QA VREAR+ + GGRG+GRGG YGRG GG N
Subjt: MATVNPFDLLGDDDAEDPSQLIAAKQVAAAPKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDTGGFN
Query: RDYAN-----NENSFSSA---PEDGDAGKTTERRGYVAPRGRGGRRGGFNN-GDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEE
RD N NEN + E+GD RRG RG RRG ++N GD+ D ERPR+ ++RHS T GNE KR+GAGR NWG + D+ + V EE
Subjt: RDYAN-----NENSFSSA---PEDGDAGKTTERRGYVAPRGRGGRRGGFNN-GDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEE
Query: AVNETEKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENND-IFIKLGSDKDK
+ +KN EK E +A E PA++ EE +PEDKEMTLEEYEK+LEEK+K+L A K EERKVD K F +MQQLSSKK NND +FIKLG++KDK
Subjt: AVNETEKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENND-IFIKLGSDKDK
Query: RKEITDKEERAKKSLSINEFLRPAEGERQYAP-----GGR-------------GRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLG
R IT++EE+ +KSLSINEFL+PA+G+ Y P GGR GR G R G + + P+I D QFPTLG
Subjt: RKEITDKEERAKKSLSINEFLRPAEGERQYAP-----GGR-------------GRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLG
|
|
| Q9LVT8 RGG repeats nuclear RNA binding protein C | 9.9e-59 | 50.66 | Show/hide |
Query: MATVNPFDLLGDDDAEDPSQLIAAKQVAAAPKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDTGGFN
MA++NPFDLLG DDAEDPSQL A + + AA+A K A P+KP PP+QA VRE+R+ + +GGRG G GG G G+ RGR GG+N
Subjt: MATVNPFDLLGDDDAEDPSQLIAAKQVAAAPKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDTGGFN
Query: RDYAN-----NENSFSSA----PEDGD-AGKTTERRGYVAPRGR-GGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVP
RD N NEN FS ED D A + GY GR G RRGG NG++ D ERP R ++RHS TG G KR G GRGNWG + D+
Subjt: RDYAN-----NENSFSSA----PEDGD-AGKTTERRGYVAPRGR-GGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVP
Query: EEAVNETEKNTGDEKPVQEDDAAGVNTENPAKELEETEPED---KEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKE-NNDIFIKLG
EE E EK+ EK ED+ E A+E + E E+ +EMTLEEYEK+LEEK+K+L A K EERKVD K F SMQQLS+KK + +IFIKLG
Subjt: EEAVNETEKNTGDEKPVQEDDAAGVNTENPAKELEETEPED---KEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKE-NNDIFIKLG
Query: SDKDKRKEITDKEERAKKSLSINEFLRPAEGERQYAPGGRGRGR-GRGSRG-GYSGSSMSNVAAPSIEDPGQFPTLG
SDK+KRK+ T E+AKKSLSINEFL+PA+G+R GG RGR GRG RG G + AAP+I D QFP+LG
Subjt: SDKDKRKEITDKEERAKKSLSINEFLRPAEGERQYAPGGRGRGR-GRGSRG-GYSGSSMSNVAAPSIEDPGQFPTLG
|
|
| Q9SQ56 RGG repeats nuclear RNA binding protein A (Fragment) | 2.4e-65 | 58.69 | Show/hide |
Query: GGRGSGRGGG-GRGYGRGRDTGGFNRDYANNENSFSS---------APEDGDAGKTTERR-GYVAPRG--RGGRRGGFNNGDAA--DGERPRRAFERHSG
GGRG RGGG GRG GRGR GFN++ A++EN+F S EDG++GK +ERR GY PRG GGRRGGFNNGDAA +GERPRR F+R SG
Subjt: GGRGSGRGGG-GRGYGRGRDTGGFNRDYANNENSFSS---------APEDGDAGKTTERR-GYVAPRG--RGGRRGGFNNGDAA--DGERPRRAFERHSG
Query: TGRGNEF-KREGAGRGNWGRSTDEFSEVPEEAVNETEKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKV
TGRGNE+ KREG+GRGNWG D+ ++ E VN+ EK EK +++A N ++ A E EE EPE+KEMTLEEYEKL+EEKRK+L+ALK EERKV
Subjt: TGRGNEF-KREGAGRGNWGRSTDEFSEVPEEAVNETEKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKV
Query: DA-KEFASMQQLSSKKENNDIFIKLGSDKDKRKEITDKEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSN--VAAPSIEDPGQFP
+ KE SMQ LS+KK +++IFIKLGS+K+KRKE E+A+K+ SINEFL+PAEGE GGRGRG GRG RGG+ G N +APSIED GQFP
Subjt: DA-KEFASMQQLSSKKENNDIFIKLGSDKDKRKEITDKEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMSN--VAAPSIEDPGQFP
Query: TLGAK
+L AK
Subjt: TLGAK
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G16830.1 Hyaluronan / mRNA binding family | 1.4e-76 | 55.53 | Show/hide |
Query: MATVNPFDLLGDDDAEDPSQL-IAAKQVAAAPKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDTGGF
MAT+NPFDLL DDDAEDPSQL +A +++ + K G S+ P LPSKPLPPAQA VREARS++ RGG G G G+ RGR GG+
Subjt: MATVNPFDLLGDDDAEDPSQL-IAAKQVAAAPKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDTGGF
Query: NRDYANN--ENSFSSAPEDGDAGKTT-ERR-GYVAPRGR---------GGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFS
NRD NN ++ +GD K++ ERR G APRG GGRRGGF+N + DGERPRRAFER SGTGRG++FKR+G+GRGNWG +E +
Subjt: NRDYANN--ENSFSSAPEDGDAGKTT-ERR-GYVAPRGR---------GGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFS
Query: EVPEEAVN-ETEKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLG
E ETEK+ G EKP +D AA N E+ +EE EPEDKEMTL+EYEK+LEEK+K+L +L TT ERKVD K F SMQQLS+KK N++IFIKLG
Subjt: EVPEEAVN-ETEKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLG
Query: SDKDKRKEITDKEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMS---NVAAPSIEDPGQFPTLGAK
SDKDKRK+ DKEE+AKK++SINEFL+PAEG Y G GRGRG RGG S N AAP+I D QFP+LG K
Subjt: SDKDKRKEITDKEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMS---NVAAPSIEDPGQFPTLGAK
|
|
| AT4G16830.2 Hyaluronan / mRNA binding family | 3.4e-54 | 61.64 | Show/hide |
Query: DGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVN-ETEKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKR
DGERPRRAFER SGTGRG++FKR+G+GRGNWG +E + E ETEK+ G EKP +D AA N E+ +EE EPEDKEMTL+EYEK+LEEK+
Subjt: DGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVN-ETEKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKR
Query: KSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITDKEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMS---
K+L +L TT ERKVD K F SMQQLS+KK N++IFIKLGSDKDKRK+ DKEE+AKK++SINEFL+PAEG Y G GRGRG RGG S
Subjt: KSLMALKTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITDKEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMS---
Query: NVAAPSIEDPGQFPTLGAK
N AAP+I D QFP+LG K
Subjt: NVAAPSIEDPGQFPTLGAK
|
|
| AT4G16830.3 Hyaluronan / mRNA binding family | 3.6e-64 | 56.23 | Show/hide |
Query: VREARSESSRGGRGSGRGGGGRGYGRGRDTGGFNRDYANN--ENSFSSAPEDGDAGKTT-ERR-GYVAPRGR---------GGRRGGFNNGDAADGERPR
VREARS++ RGG G G G+ RGR GG+NRD NN ++ +GD K++ ERR G APRG GGRRGGF+N + DGERPR
Subjt: VREARSESSRGGRGSGRGGGGRGYGRGRDTGGFNRDYANN--ENSFSSAPEDGDAGKTT-ERR-GYVAPRGR---------GGRRGGFNNGDAADGERPR
Query: RAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVN-ETEKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMAL
RAFER SGTGRG++FKR+G+GRGNWG +E + E ETEK+ G EKP +D AA N E+ +EE EPEDKEMTL+EYEK+LEEK+K+L +L
Subjt: RAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEEAVN-ETEKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMAL
Query: KTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITDKEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMS---NVAAPS
TT ERKVD K F SMQQLS+KK N++IFIKLGSDKDKRK+ DKEE+AKK++SINEFL+PAEG Y G GRGRG RGG S N AAP+
Subjt: KTTEERKVDAKEFASMQQLSSKKENNDIFIKLGSDKDKRKEITDKEERAKKSLSINEFLRPAEGERQYAPGGRGRGRGRGSRGGYSGSSMS---NVAAPS
Query: IEDPGQFPTLGAK
I D QFP+LG K
Subjt: IEDPGQFPTLGAK
|
|
| AT4G17520.1 Hyaluronan / mRNA binding family | 2.6e-62 | 49.48 | Show/hide |
Query: MATVNPFDLLGDDDAEDPSQLIAAKQVAAAPKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDTGGFN
MA+VNPFDLL DDDAEDPSQ++A+K P K A Q K +P+KP PP+QA VREAR+ + GGRG+GRGG YGRG GG N
Subjt: MATVNPFDLLGDDDAEDPSQLIAAKQVAAAPKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDTGGFN
Query: RDYAN-----NENSFSSA---PEDGDAGKTTERRGYVAPRGRGGRRGGFNN-GDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEE
RD N NEN + E+GD RRG RG RRG ++N GD+ D ERPR+ ++RHS T GNE KR+GAGR NWG + D+ + V EE
Subjt: RDYAN-----NENSFSSA---PEDGDAGKTTERRGYVAPRGRGGRRGGFNN-GDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVPEE
Query: AVNETEKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENND-IFIKLGSDKDK
+ +KN EK E +A E PA++ EE +PEDKEMTLEEYEK+LEEK+K+L A K EERKVD K F +MQQLSSKK NND +FIKLG++KDK
Subjt: AVNETEKNTGDEKPVQEDDAAGVNTENPAKELEETEPEDKEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKENND-IFIKLGSDKDK
Query: RKEITDKEERAKKSLSINEFLRPAEGERQYAP-----GGR-------------GRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLG
R IT++EE+ +KSLSINEFL+PA+G+ Y P GGR GR G R G + + P+I D QFPTLG
Subjt: RKEITDKEERAKKSLSINEFLRPAEGERQYAP-----GGR-------------GRGRGRGSRGGYSGSSMSNVAAPSIEDPGQFPTLG
|
|
| AT5G47210.1 Hyaluronan / mRNA binding family | 7.0e-60 | 50.66 | Show/hide |
Query: MATVNPFDLLGDDDAEDPSQLIAAKQVAAAPKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDTGGFN
MA++NPFDLLG DDAEDPSQL A + + AA+A K A P+KP PP+QA VRE+R+ + +GGRG G GG G G+ RGR GG+N
Subjt: MATVNPFDLLGDDDAEDPSQLIAAKQVAAAPKKGPAHAQAKPAASAAPQNKPATLPSKPLPPAQAVVREARSESSRGGRGSGRGGGGRGYGRGRDTGGFN
Query: RDYAN-----NENSFSSA----PEDGD-AGKTTERRGYVAPRGR-GGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVP
RD N NEN FS ED D A + GY GR G RRGG NG++ D ERP R ++RHS TG G KR G GRGNWG + D+
Subjt: RDYAN-----NENSFSSA----PEDGD-AGKTTERRGYVAPRGR-GGRRGGFNNGDAADGERPRRAFERHSGTGRGNEFKREGAGRGNWGRSTDEFSEVP
Query: EEAVNETEKNTGDEKPVQEDDAAGVNTENPAKELEETEPED---KEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKE-NNDIFIKLG
EE E EK+ EK ED+ E A+E + E E+ +EMTLEEYEK+LEEK+K+L A K EERKVD K F SMQQLS+KK + +IFIKLG
Subjt: EEAVNETEKNTGDEKPVQEDDAAGVNTENPAKELEETEPED---KEMTLEEYEKLLEEKRKSLMALKTTEERKVDAKEFASMQQLSSKKE-NNDIFIKLG
Query: SDKDKRKEITDKEERAKKSLSINEFLRPAEGERQYAPGGRGRGR-GRGSRG-GYSGSSMSNVAAPSIEDPGQFPTLG
SDK+KRK+ T E+AKKSLSINEFL+PA+G+R GG RGR GRG RG G + AAP+I D QFP+LG
Subjt: SDKDKRKEITDKEERAKKSLSINEFLRPAEGERQYAPGGRGRGR-GRGSRG-GYSGSSMSNVAAPSIEDPGQFPTLG
|
|
