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MS022718 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022718
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationscaffold41:758612..758749
RNA-Seq ExpressionMS022718
SyntenyMS022718
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593770.1 RING-H2 finger protein ATL51, partial [Cucurbita argyrosperma subsp. sororia]5.3e-0765.22Show/hide
Query:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
        PLCR NIA  NP P +TPP  VT L YRH+S+AA+ V QDLS NVS
Subjt:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
KAG7026103.1 RING-H2 finger protein ATL51, partial [Cucurbita argyrosperma subsp. argyrosperma]5.3e-0765.22Show/hide
Query:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
        PLCR NIA  NP P +TPP  VT L YRH+S+AA+ V QDLS NVS
Subjt:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
XP_022155701.1 RING-H2 finger protein ATL52-like [Momordica charantia]4.8e-0867.39Show/hide
Query:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
        PLCRCNIA  NP P +TPP SVT L YRH S+AA+ V QD S+NVS
Subjt:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
XP_022964349.1 RING-H2 finger protein ATL52-like [Cucurbita moschata]5.3e-0765.22Show/hide
Query:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
        PLCR NIA  NP P +TPP  VT L YRH+S+AA+ V QDLS NVS
Subjt:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
XP_023000254.1 RING-H2 finger protein ATL52-like [Cucurbita maxima]5.3e-0765.22Show/hide
Query:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
        PLCR NIA  NP P +TPP  VT L YRH+S+AA+ V QDLS NVS
Subjt:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
TrEMBL top hitse value%identityAlignment
A0A6J1DSH1 RING-type E3 ubiquitin transferase2.3e-0867.39Show/hide
Query:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
        PLCRCNIA  NP P +TPP SVT L YRH S+AA+ V QD S+NVS
Subjt:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
A0A6J1H2X8 RING-type E3 ubiquitin transferase9.8e-0763.04Show/hide
Query:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
        P CR NI   NP P +TPP SVT L YRH+S+AA+ V QDLS+NVS
Subjt:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
A0A6J1HMW7 RING-type E3 ubiquitin transferase2.6e-0765.22Show/hide
Query:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
        PLCR NIA  NP P +TPP  VT L YRH+S+AA+ V QDLS NVS
Subjt:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
A0A6J1KJE3 RING-type E3 ubiquitin transferase2.6e-0765.22Show/hide
Query:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
        PLCR NIA  NP P +TPP  VT L YRH+S+AA+ V QDLS NVS
Subjt:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
A0A6J1L482 RING-type E3 ubiquitin transferase9.8e-0763.04Show/hide
Query:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
        P CR NI   NP P +TPP SVT L YRH+S+AA+ V QDLS+NVS
Subjt:  PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTCTTTGCCGCTGCAATATCGCCTTCGCGAATCCTACGCCTCTGCAGACTCCGCCGTCATCCGTGACGGAGCTAAGGTATCGCCACAATAGCAACGCGGCCATTGCGGT
ATTTCAAGATCTGTCCAAAAACGTGAGT
mRNA sequenceShow/hide mRNA sequence
CCTCTTTGCCGCTGCAATATCGCCTTCGCGAATCCTACGCCTCTGCAGACTCCGCCGTCATCCGTGACGGAGCTAAGGTATCGCCACAATAGCAACGCGGCCATTGCGGT
ATTTCAAGATCTGTCCAAAAACGTGAGT
Protein sequenceShow/hide protein sequence
PLCRCNIAFANPTPLQTPPSSVTELRYRHNSNAAIAVFQDLSKNVS