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MS022734 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022734
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionIGR domain-containing protein
Genome locationscaffold73:9978..12554
RNA-Seq ExpressionMS022734
SyntenyMS022734
Gene Ontology termsNA
InterPro domainsIPR019083 - IGR protein motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590496.1 hypothetical protein SDJN03_15919, partial [Cucurbita argyrosperma subsp. sororia]2.1e-4990.74Show/hide
Query:  RMAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLW
        RMAWRQIFSN+RSILQPYS PL+ARFFSKS PYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLK+LGIPCK RKLILKY HKYRLGLW
Subjt:  RMAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLW

Query:  RPRADSMK
        RPR+D++K
Subjt:  RPRADSMK

KAG7024029.1 hypothetical protein SDJN02_15058 [Cucurbita argyrosperma subsp. argyrosperma]7.8e-4990.65Show/hide
Query:  MAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLWR
        MAWRQIFSN+RSILQPYS PL+ARFFSKS PYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLK+LGIPCK RKLILKY HKYRLGLWR
Subjt:  MAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLWR

Query:  PRADSMK
        PR+D++K
Subjt:  PRADSMK

XP_022154599.1 uncharacterized protein LOC111021823 [Momordica charantia]1.3e-5196.26Show/hide
Query:  MAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLWR
        MAWRQIFSNNRSILQPYSAPL+ARFFSKSTPYVVKVGIPEFLNGVGHGVESHV KLESEIGDFQKLLVTRTLKLK+LGIPCK RKLILKYIHKYRLGLWR
Subjt:  MAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLWR

Query:  PRADSMK
        PRADSMK
Subjt:  PRADSMK

XP_022155728.1 uncharacterized protein LOC111022782 isoform X1 [Momordica charantia]2.5e-55100Show/hide
Query:  RMAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLW
        RMAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLW
Subjt:  RMAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLW

Query:  RPRADSMKP
        RPRADSMKP
Subjt:  RPRADSMKP

XP_022155738.1 uncharacterized protein LOC111022782 isoform X2 [Momordica charantia]2.5e-55100Show/hide
Query:  RMAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLW
        RMAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLW
Subjt:  RMAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLW

Query:  RPRADSMKP
        RPRADSMKP
Subjt:  RPRADSMKP

TrEMBL top hitse value%identityAlignment
A0A6J1DML5 uncharacterized protein LOC1110218236.2e-5296.26Show/hide
Query:  MAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLWR
        MAWRQIFSNNRSILQPYSAPL+ARFFSKSTPYVVKVGIPEFLNGVGHGVESHV KLESEIGDFQKLLVTRTLKLK+LGIPCK RKLILKYIHKYRLGLWR
Subjt:  MAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLWR

Query:  PRADSMK
        PRADSMK
Subjt:  PRADSMK

A0A6J1DNQ6 uncharacterized protein LOC111022782 isoform X11.2e-55100Show/hide
Query:  RMAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLW
        RMAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLW
Subjt:  RMAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLW

Query:  RPRADSMKP
        RPRADSMKP
Subjt:  RPRADSMKP

A0A6J1DNR1 uncharacterized protein LOC111022782 isoform X21.2e-55100Show/hide
Query:  RMAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLW
        RMAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLW
Subjt:  RMAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLW

Query:  RPRADSMKP
        RPRADSMKP
Subjt:  RPRADSMKP

A0A6J1HA49 uncharacterized protein LOC1114619914.2e-4889.72Show/hide
Query:  MAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLWR
        MAWRQI SN+RS LQPYSAPL+ARFFSKS PYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLK+LGIPCK RKLILKY HKYRLGLWR
Subjt:  MAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLWR

Query:  PRADSMK
        PR+D++K
Subjt:  PRADSMK

A0A6J1HZ75 uncharacterized protein LOC1114679434.9e-4990.65Show/hide
Query:  MAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLWR
        MAWRQI SN+RSILQPYSAPL+ARFFSKS PYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLK+LGIPCK RKLILKY HKYRLGLWR
Subjt:  MAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLWR

Query:  PRADSMK
        PR+D++K
Subjt:  PRADSMK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05810.1 FUNCTIONS IN: molecular_function unknown2.7e-3161.26Show/hide
Query:  MAWRQIFSNNRSIL---QPYSAPLYARFF-SKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRL
        MAW ++  + R+ L   Q  S     RF  SK   Y VKVGIPEFL G+G G E+H+AK+E+EIGD  KLLVTRTL+LK+LGIPCK RKLILKY  KYRL
Subjt:  MAWRQIFSNNRSIL---QPYSAPLYARFF-SKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRL

Query:  GLWRPRADSMK
        GLW+PRAD++K
Subjt:  GLWRPRADSMK

AT5G26800.1 FUNCTIONS IN: molecular_function unknown2.3e-3565.77Show/hide
Query:  MAWRQIFSNNRSIL--QPYSAPL-YARFFSKS-TPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRL
        MAW ++  + RS+L   P S+ L + RF+SKS  PY VKVGIPEFL+G+G GVE+H+AKLE+E+GD  KLLVTRTL+LK+ GIPCK RKLILKY HKYRL
Subjt:  MAWRQIFSNNRSIL--QPYSAPL-YARFFSKS-TPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRL

Query:  GLWRPRADSMK
        GLW+PRAD++K
Subjt:  GLWRPRADSMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGATGGCATGGAGGCAGATTTTCTCCAACAATAGGTCAATACTCCAACCATACTCGGCGCCTTTATATGCTAGATTCTTTTCTAAATCCACCCCATATGTTGTGAAGGT
CGGGATACCAGAGTTTTTAAACGGTGTTGGGCATGGGGTGGAGTCACATGTGGCTAAACTTGAATCAGAGATTGGCGACTTCCAAAAGTTGCTTGTCACTCGCACACTTA
AGCTGAAAGAACTTGGAATCCCATGCAAAGATAGGAAGCTGATATTGAAGTATATTCACAAGTACAGGCTAGGACTATGGAGGCCCCGAGCCGACTCCATGAAGCCC
mRNA sequenceShow/hide mRNA sequence
AGGATGGCATGGAGGCAGATTTTCTCCAACAATAGGTCAATACTCCAACCATACTCGGCGCCTTTATATGCTAGATTCTTTTCTAAATCCACCCCATATGTTGTGAAGGT
CGGGATACCAGAGTTTTTAAACGGTGTTGGGCATGGGGTGGAGTCACATGTGGCTAAACTTGAATCAGAGATTGGCGACTTCCAAAAGTTGCTTGTCACTCGCACACTTA
AGCTGAAAGAACTTGGAATCCCATGCAAAGATAGGAAGCTGATATTGAAGTATATTCACAAGTACAGGCTAGGACTATGGAGGCCCCGAGCCGACTCCATGAAGCCC
Protein sequenceShow/hide protein sequence
RMAWRQIFSNNRSILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKELGIPCKDRKLILKYIHKYRLGLWRPRADSMKP