; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022742 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022742
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlycine-rich protein family
Genome locationscaffold73:114572..115596
RNA-Seq ExpressionMS022742
SyntenyMS022742
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653344.1 hypothetical protein Csa_007318 [Cucumis sativus]3.1e-5275Show/hide
Query:  VVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGLFMQGE
        +V E  +CFDNKFIYNGC+  YRLNPSGSFNVPPEATNLFC+GPCL+ET+L+L+CLD+ F NFLFYNKATAQ+VRNALR GCSYSSQRGNFN GLFMQGE
Subjt:  VVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGLFMQGE

Query:  ISKAHSFQKW--LTYCIILLVGCCFFIL
         S+AH+FQKW  L Y ++ LVGCC F++
Subjt:  ISKAHSFQKW--LTYCIILLVGCCFFIL

XP_008450550.1 PREDICTED: uncharacterized protein LOC103492117 [Cucumis melo]4.6e-5677.44Show/hide
Query:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGL
        EI GQ+V E+ +CFDNKFIYNGC+S YRLNPSGSFNVPPEATNLFC+GPCL+ET+L+L+CLD++F NFLFYNKATAQ+VRNALR GCS+SSQRGNFN GL
Subjt:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGL

Query:  FMQGEISKAHSFQKW--LTYCIILLVGCCFFIL
        FMQGE+SKAH+FQ+W  L Y  +LLVGCCF IL
Subjt:  FMQGEISKAHSFQKW--LTYCIILLVGCCFFIL

XP_022158829.1 uncharacterized protein LOC111025289 [Momordica charantia]1.0e-7199.24Show/hide
Query:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGL
        EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKA AQNVRNALRAGCSYSSQRGNFNPGL
Subjt:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGL

Query:  FMQGEISKAHSFQKWLTYCIILLVGCCFFIL
        FMQGEISKAHSFQKWLTYCIILLVGCCFFIL
Subjt:  FMQGEISKAHSFQKWLTYCIILLVGCCFFIL

XP_031736077.1 uncharacterized protein LOC101204762 [Cucumis sativus]1.4e-5575.94Show/hide
Query:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGL
        EIPGQ+V E  +CFDNKFIYNGC+  YRLNPSGSFNVPPEATNLFC+GPCL+ET+L+L+CLD+ F NFLFYNKATAQ+VRNALR GCSYSSQRGNFN GL
Subjt:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGL

Query:  FMQGEISKAHSFQKW--LTYCIILLVGCCFFIL
        FMQGE S+AH+FQKW  L Y ++ LVGCC F++
Subjt:  FMQGEISKAHSFQKW--LTYCIILLVGCCFFIL

XP_038878440.1 uncharacterized protein LOC120070674 [Benincasa hispida]1.5e-5479.37Show/hide
Query:  VVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGLFMQGE
        +V EA +CFDNKFIYNGC+S YRLNPSGSFNVPPEATNLFC+GPCLVET+LVL+CLDD F NF F+NKAT Q+ RNAL  GCS+SSQRGNFN GLFMQGE
Subjt:  VVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGLFMQGE

Query:  ISKAHSFQKWLTYCIILLVGCCFFIL
        ISKAH  QKW  YCII LVGCC FIL
Subjt:  ISKAHSFQKWLTYCIILLVGCCFFIL

TrEMBL top hitse value%identityAlignment
A0A0A0LYD5 Uncharacterized protein6.5e-5675.94Show/hide
Query:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGL
        EIPGQ+V E  +CFDNKFIYNGC+  YRLNPSGSFNVPPEATNLFC+GPCL+ET+L+L+CLD+ F NFLFYNKATAQ+VRNALR GCSYSSQRGNFN GL
Subjt:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGL

Query:  FMQGEISKAHSFQKW--LTYCIILLVGCCFFIL
        FMQGE S+AH+FQKW  L Y ++ LVGCC F++
Subjt:  FMQGEISKAHSFQKW--LTYCIILLVGCCFFIL

A0A1S3BPH6 uncharacterized protein LOC1034921172.2e-5677.44Show/hide
Query:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGL
        EI GQ+V E+ +CFDNKFIYNGC+S YRLNPSGSFNVPPEATNLFC+GPCL+ET+L+L+CLD++F NFLFYNKATAQ+VRNALR GCS+SSQRGNFN GL
Subjt:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGL

Query:  FMQGEISKAHSFQKW--LTYCIILLVGCCFFIL
        FMQGE+SKAH+FQ+W  L Y  +LLVGCCF IL
Subjt:  FMQGEISKAHSFQKW--LTYCIILLVGCCFFIL

A0A6J1E0J9 uncharacterized protein LOC1110252895.0e-7299.24Show/hide
Query:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGL
        EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKA AQNVRNALRAGCSYSSQRGNFNPGL
Subjt:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGL

Query:  FMQGEISKAHSFQKWLTYCIILLVGCCFFIL
        FMQGEISKAHSFQKWLTYCIILLVGCCFFIL
Subjt:  FMQGEISKAHSFQKWLTYCIILLVGCCFFIL

A0A6J1EZD6 uncharacterized protein LOC1114378111.1e-5070.45Show/hide
Query:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGL
        E+ GQ VT+A +CFDN  IY GC+S YRLNP+G+ NVP EATNLFC+GPCL+ET+L+L+CLD AF NFLFYNKAT  +++NALRAGCSYS+QRGNFNPG 
Subjt:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGL

Query:  FMQGEISKAHSFQKWLT-YCIILLVGCCFFIL
        FMQGEISK H+ QKW+T Y +  L+GCCFFIL
Subjt:  FMQGEISKAHSFQKWLT-YCIILLVGCCFFIL

A0A6J1JMH7 uncharacterized protein LOC1114865295.4e-5069.47Show/hide
Query:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGL
        E  GQ VT+  +CFDN  IYNGC+S YRLNPSG+ NVP +ATNLFC+GPCL+ET+L+L+CLD AF NFLFYNKAT   V+NALRAGCSYS+QRGNFNPG 
Subjt:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGL

Query:  FMQGEISKAHSFQKWLT-YCIILLVGCCFFI
        FMQGEISK H+ QKW+T Y ++ L+GCCF +
Subjt:  FMQGEISKAHSFQKWLT-YCIILLVGCCFFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G56320.1 BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT5G49350.2)3.0e-2953.47Show/hide
Query:  GQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGLFMQ
        G +V  A  CF+N  +Y GC+  +RLN  G F VPPE T+ FC+GPC  ET LVL C++    +F+FYN+AT ++VRNALR GCS S  RGNFN G + Q
Subjt:  GQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGLFMQ

Query:  G
        G
Subjt:  G

AT5G49350.1 Glycine-rich protein family2.1e-2242.27Show/hide
Query:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFN
        E P ++V +AL C + K IY  CD  +RL  +G  N+P   T  FC GPC  ET L L+C+++   ++ F+N+AT  ++R  L++GCSY  +RG FN
Subjt:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFN

AT5G49350.2 Glycine-rich protein family2.1e-2242.27Show/hide
Query:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFN
        E P ++V +AL C + K IY  CD  +RL  +G  N+P   T  FC GPC  ET L L+C+++   ++ F+N+AT  ++R  L++GCSY  +RG FN
Subjt:  EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGATTCCGGGCCAAGTTGTGACAGAAGCATTGAGATGTTTTGACAATAAATTTATATATAATGGGTGTGACAGTGGTTATAGATTGAACCCAAGTGGGAGTTTCAATGT
CCCTCCTGAAGCTACCAATCTGTTCTGCAGCGGACCGTGCTTGGTCGAAACACGACTTGTGCTCGACTGCCTCGACGACGCATTTGGAAACTTCTTGTTTTACAACAAAG
CCACGGCGCAAAACGTCCGTAATGCCCTCCGCGCCGGCTGCAGCTACTCAAGCCAAAGAGGGAACTTCAATCCAGGATTGTTCATGCAAGGTGAAATCAGCAAAGCCCAC
AGCTTCCAAAAATGGCTCACCTATTGTATTATTTTGCTTGTTGGATGTTGTTTTTTCATCTTA
mRNA sequenceShow/hide mRNA sequence
GAGATTCCGGGCCAAGTTGTGACAGAAGCATTGAGATGTTTTGACAATAAATTTATATATAATGGGTGTGACAGTGGTTATAGATTGAACCCAAGTGGGAGTTTCAATGT
CCCTCCTGAAGCTACCAATCTGTTCTGCAGCGGACCGTGCTTGGTCGAAACACGACTTGTGCTCGACTGCCTCGACGACGCATTTGGAAACTTCTTGTTTTACAACAAAG
CCACGGCGCAAAACGTCCGTAATGCCCTCCGCGCCGGCTGCAGCTACTCAAGCCAAAGAGGGAACTTCAATCCAGGATTGTTCATGCAAGGTGAAATCAGCAAAGCCCAC
AGCTTCCAAAAATGGCTCACCTATTGTATTATTTTGCTTGTTGGATGTTGTTTTTTCATCTTA
Protein sequenceShow/hide protein sequence
EIPGQVVTEALRCFDNKFIYNGCDSGYRLNPSGSFNVPPEATNLFCSGPCLVETRLVLDCLDDAFGNFLFYNKATAQNVRNALRAGCSYSSQRGNFNPGLFMQGEISKAH
SFQKWLTYCIILLVGCCFFIL