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MS022758 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022758
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box domain-containing protein
Genome locationscaffold73:269277..269441
RNA-Seq ExpressionMS022758
SyntenyMS022758
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64030.1 hypothetical protein Csa_013491 [Cucumis sativus]2.0e-0555.56Show/hide
Query:  QLIKVFEDGNILCLFDGIDFILYDTKTRRIEILDQVVGIKKRSY-VFQIESLSF
        QLIK ++DG ILCLF     +LYDTKTR++E L QV GI KRS+ + Q++S+ F
Subjt:  QLIKVFEDGNILCLFDGIDFILYDTKTRRIEILDQVVGIKKRSY-VFQIESLSF
XP_004135796.1 putative F-box protein At1g46984 [Cucumis sativus]1.6e-0558.93Show/hide
Query:  LQLIKVFEDGNILCLFDGIDFILYDTKTRRIEIL-DQVVGIKKRSYVFQIESLSFH
        LQLIK  EDGNILCL+ GI  ILYD  T+ +EIL +Q   IK+  +V QIES SF+
Subjt:  LQLIKVFEDGNILCLFDGIDFILYDTKTRRIEIL-DQVVGIKKRSYVFQIESLSFH
XP_008450717.1 PREDICTED: putative F-box protein At3g21120 [Cucumis melo]2.3e-0455.36Show/hide
Query:  LQLIKVFEDGNILCLFDGIDFILYDTKTRRIEIL-DQVVGIKKRSYVFQIESLSFH
        LQL+K  EDG+ILCL  GI  I+YD KT+++EIL DQ   IK+  +  QIES SF+
Subjt:  LQLIKVFEDGNILCLFDGIDFILYDTKTRRIEIL-DQVVGIKKRSYVFQIESLSFH
XP_038880514.1 putative F-box protein At1g46984 [Benincasa hispida]1.2e-0557.14Show/hide
Query:  LQLIKVFEDGNILCLFDGIDFILYDTKTRRIEIL-DQVVGIKKRSYVFQIESLSFH
        LQLIK  EDGNILCL  G+  ILYD KT   E+L DQ   IKK  +V+QI+S +F+
Subjt:  LQLIKVFEDGNILCLFDGIDFILYDTKTRRIEIL-DQVVGIKKRSYVFQIESLSFH
TrEMBL top hitse value%identityAlignment
A0A0A0LQ77 Uncharacterized protein9.9e-0655.56Show/hide
Query:  QLIKVFEDGNILCLFDGIDFILYDTKTRRIEILDQVVGIKKRSY-VFQIESLSF
        QLIK ++DG ILCLF     +LYDTKTR++E L QV GI KRS+ + Q++S+ F
Subjt:  QLIKVFEDGNILCLFDGIDFILYDTKTRRIEILDQVVGIKKRSY-VFQIESLSF
A0A0A0M1M5 F-box domain-containing protein7.6e-0658.93Show/hide
Query:  LQLIKVFEDGNILCLFDGIDFILYDTKTRRIEIL-DQVVGIKKRSYVFQIESLSFH
        LQLIK  EDGNILCL+ GI  ILYD  T+ +EIL +Q   IK+  +V QIES SF+
Subjt:  LQLIKVFEDGNILCLFDGIDFILYDTKTRRIEIL-DQVVGIKKRSYVFQIESLSFH
A0A1S3BQV8 putative F-box protein At3g211201.1e-0455.36Show/hide
Query:  LQLIKVFEDGNILCLFDGIDFILYDTKTRRIEIL-DQVVGIKKRSYVFQIESLSFH
        LQL+K  EDG+ILCL  GI  I+YD KT+++EIL DQ   IK+  +  QIES SF+
Subjt:  LQLIKVFEDGNILCLFDGIDFILYDTKTRRIEIL-DQVVGIKKRSYVFQIESLSFH
A0A5D3CIX9 Putative F-box protein1.1e-0455.36Show/hide
Query:  LQLIKVFEDGNILCLFDGIDFILYDTKTRRIEIL-DQVVGIKKRSYVFQIESLSFH
        LQL+K  EDG+ILCL  GI  I+YD KT+++EIL DQ   IK+  +  QIES SF+
Subjt:  LQLIKVFEDGNILCLFDGIDFILYDTKTRRIEIL-DQVVGIKKRSYVFQIESLSFH
A0A5D3CM94 Putative F-box protein9.3e-0450Show/hide
Query:  LQLIKVFEDGNILCLFDGIDFILYDTKTRRIEIL-DQVVGIKKRSYVFQIESLSFH
        L  IK  EDG ILCL  G+  ILYD KT+  EIL DQ V ++K  +V  I+S +F+
Subjt:  LQLIKVFEDGNILCLFDGIDFILYDTKTRRIEIL-DQVVGIKKRSYVFQIESLSFH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTCAACTCATCAAAGTCTTTGAGGATGGGAATATCTTATGTCTTTTTGATGGAATTGATTTTATCTTGTATGATACGAAAACTAGGAGGATAGAGATATTGGATCAAGT
TGTTGGAATTAAGAAACGTTCATACGTTTTTCAAATTGAGTCCTTAAGTTTTCAT
mRNA sequenceShow/hide mRNA sequence
CTTCAACTCATCAAAGTCTTTGAGGATGGGAATATCTTATGTCTTTTTGATGGAATTGATTTTATCTTGTATGATACGAAAACTAGGAGGATAGAGATATTGGATCAAGT
TGTTGGAATTAAGAAACGTTCATACGTTTTTCAAATTGAGTCCTTAAGTTTTCAT
Protein sequenceShow/hide protein sequence
LQLIKVFEDGNILCLFDGIDFILYDTKTRRIEILDQVVGIKKRSYVFQIESLSFH