; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022765 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022765
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description60S ribosomal protein L18, putative
Genome locationscaffold73:323513..332064
RNA-Seq ExpressionMS022765
SyntenyMS022765
Gene Ontology termsGO:0001731 - formation of translation preinitiation complex (biological process)
GO:0043086 - negative regulation of catalytic activity (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004857 - enzyme inhibitor activity (molecular function)
InterPro domainsIPR000039 - Ribosomal protein L18e
IPR002478 - PUA domain
IPR004521 - Uncharacterised domain CHP00451
IPR015947 - PUA-like superfamily
IPR021131 - Ribosomal protein L18e/L15P
IPR036227 - Ribosomal L18e/L15P superfamily
IPR041366 - Pre-PUA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF49907.1 60S ribosomal protein L18, putative [Ricinus communis]2.9e-18083.5Show/hide
Query:  RFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF
        +FS+++VS+QNQVKASVQRKIRQSIA+EYPGLEPVLDDLLPKK+PLIV KCQNHLNLV+VN+VPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF
Subjt:  RFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF

Query:  VLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWK---------------------------
        VLAGANIMCPGLTSPGGALD+EVEA+TPVAIMAEGKQHALAIGFTKMSAK+I+  NKGIGVDNMHYLNDGLWK                           
Subjt:  VLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWK---------------------------

Query:  --------GIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYE
                GIDL AGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMS++NK PLSLSRLI F KGKESK AVVVGT+TDDIRVYE
Subjt:  --------GIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYE

Query:  VPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV
        VPALKV AL+FTETARARIEKAGGECLTFDQLA+RAPLGQNTVLLRG KN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG+RNSRGFRV
Subjt:  VPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV

KAB5556198.1 hypothetical protein DKX38_007107 [Salix brachista]2.5e-18490.83Show/hide
Query:  FRFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIK
        F+FS ++VS+QNQVKASVQRKIRQSIA+EYPGLEPVLDD LPKK+PLIV KCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYP+IMKKLQVDRGAIK
Subjt:  FRFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIK

Query:  FVLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTKRTAPKSDDIYLK
        FVLAGANIMCPGLTS GGALDDEV+A+TPVAIMAEGKQHALAIGFTKMSAK+I++ NKGIGVDNMHYLNDGLWKGIDL  GGKSKKTKRTAPKSDDIYLK
Subjt:  FVLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTKRTAPKSDDIYLK

Query:  LLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLAL
        LLVKLYRFLVRRTGSKFNAVILKRLFMS++NK PLSLSRLI F KGKE+K AV+VGT+TDDIRVYEVPALKV ALRFTETARARIEKAGGECLTFDQLAL
Subjt:  LLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLAL

Query:  RAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV
        RAPLGQNTVLLRG KNSREAVKHFGPAPGVPHSHTKPYVR+KGRKFE+ARGKRNS+GFRV
Subjt:  RAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV

KAF9681543.1 hypothetical protein SADUNF_Sadunf05G0012500 [Salix dunnii]2.0e-18188.59Show/hide
Query:  RFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF
        +FS+++VS+QNQVKASVQRKIRQSIA+EYPGLEPVLDD LPKK+PLIV KCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF
Subjt:  RFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF

Query:  VLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTKRTAPKSDDIYLKL
        VLAGANIMCPGLTS GG LDDEV+A+TPVAIMAEGKQHALAIGFTKMSAK+I++ NKGIGVDNMHYLNDGLWKGIDL  GGKSKKTKRTAPKSDDIYLKL
Subjt:  VLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTKRTAPKSDDIYLKL

Query:  LVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALR
        LVKLYRFLVRRTGSKFNAVILKRLFMS++NK PLSLSRLI F KGKE+KIAV+VGT+TDDIRVYEVPALKV ALRFTE ARARIEKAGGECLTFDQLALR
Subjt:  LVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALR

Query:  APLGQNT---------VLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV
        APLGQNT         VLLRG KN+REAVKHFGPAPGVPHSHTKPYVR+KGRKFE+ARGKRNSRGFRV
Subjt:  APLGQNT---------VLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV

OWM72463.1 hypothetical protein CDL15_Pgr018348 [Punica granatum]3.7e-18893.31Show/hide
Query:  RFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF
        RFS EDVSAQNQVKASVQRKIRQSIAEEYPGLEPVL+DLLPKK+PLIV KCQNHLNLV+VNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF
Subjt:  RFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF

Query:  VLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTKRTAPKSDDIYLKL
        VLAGANIMCPGLTSPGGALDD+VE++TPVAIMAEGKQHALAIGFTKMSAK+IRA NKGIGVDNMHYLNDGLWKGIDL AGGKSKKT+RTAPKSDDIYLKL
Subjt:  VLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTKRTAPKSDDIYLKL

Query:  LVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALR
        LVKLYRFLVRRTGSKFNAVILKRLFMS+VNKPPLSLSRLI++  GK+ KIAVVVGT+TDDIRVYEVPALKV ALRFTETARARIEKAGGECLTFDQLALR
Subjt:  LVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALR

Query:  APLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV
        APLGQNTVLLRG KN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG+RNSRGFRV
Subjt:  APLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV

RAL52647.1 hypothetical protein DM860_007415 [Cuscuta australis]2.2e-18088.55Show/hide
Query:  RFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF
        +F  E+VS QNQVKASVQRKIRQSIAEEYPGLE VLDDLLPKK+PLIV KC NHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF
Subjt:  RFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF

Query:  VLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTKRTAPKSDDIYLKL
        VL+GANIMCPGLTSPGG LD+EVEA+TPVAIMAEGKQHALAIGFTKMSAK+I++ NKGIGVDNMHYLNDGLWKGIDL AGGKSK+TKRTAPKS+D+YLKL
Subjt:  VLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTKRTAPKSDDIYLKL

Query:  LVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALR
        LVKLYRFLVRRTGSKFNAV+LKRLFMS+ N+PPLSLSRLI F  GKE KIAV+VGTITDD+RVYEVPA+KV ALRFT+TARARIEKAGGECLTFDQLALR
Subjt:  LVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALR

Query:  APLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFR
        APLGQNT+LLRG KN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFE+ARG+RNSRG++
Subjt:  APLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFR

TrEMBL top hitse value%identityAlignment
A0A218WIU0 PUA domain-containing protein1.8e-18893.31Show/hide
Query:  RFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF
        RFS EDVSAQNQVKASVQRKIRQSIAEEYPGLEPVL+DLLPKK+PLIV KCQNHLNLV+VNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF
Subjt:  RFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF

Query:  VLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTKRTAPKSDDIYLKL
        VLAGANIMCPGLTSPGGALDD+VE++TPVAIMAEGKQHALAIGFTKMSAK+IRA NKGIGVDNMHYLNDGLWKGIDL AGGKSKKT+RTAPKSDDIYLKL
Subjt:  VLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTKRTAPKSDDIYLKL

Query:  LVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALR
        LVKLYRFLVRRTGSKFNAVILKRLFMS+VNKPPLSLSRLI++  GK+ KIAVVVGT+TDDIRVYEVPALKV ALRFTETARARIEKAGGECLTFDQLALR
Subjt:  LVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALR

Query:  APLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV
        APLGQNTVLLRG KN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG+RNSRGFRV
Subjt:  APLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV

A0A328E3X4 PUA domain-containing protein1.1e-18088.55Show/hide
Query:  RFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF
        +F  E+VS QNQVKASVQRKIRQSIAEEYPGLE VLDDLLPKK+PLIV KC NHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF
Subjt:  RFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF

Query:  VLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTKRTAPKSDDIYLKL
        VL+GANIMCPGLTSPGG LD+EVEA+TPVAIMAEGKQHALAIGFTKMSAK+I++ NKGIGVDNMHYLNDGLWKGIDL AGGKSK+TKRTAPKS+D+YLKL
Subjt:  VLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTKRTAPKSDDIYLKL

Query:  LVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALR
        LVKLYRFLVRRTGSKFNAV+LKRLFMS+ N+PPLSLSRLI F  GKE KIAV+VGTITDD+RVYEVPA+KV ALRFT+TARARIEKAGGECLTFDQLALR
Subjt:  LVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALR

Query:  APLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFR
        APLGQNT+LLRG KN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFE+ARG+RNSRG++
Subjt:  APLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFR

A0A5N5MMN8 PUA domain-containing protein1.2e-18490.83Show/hide
Query:  FRFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIK
        F+FS ++VS+QNQVKASVQRKIRQSIA+EYPGLEPVLDD LPKK+PLIV KCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYP+IMKKLQVDRGAIK
Subjt:  FRFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIK

Query:  FVLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTKRTAPKSDDIYLK
        FVLAGANIMCPGLTS GGALDDEV+A+TPVAIMAEGKQHALAIGFTKMSAK+I++ NKGIGVDNMHYLNDGLWKGIDL  GGKSKKTKRTAPKSDDIYLK
Subjt:  FVLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTKRTAPKSDDIYLK

Query:  LLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLAL
        LLVKLYRFLVRRTGSKFNAVILKRLFMS++NK PLSLSRLI F KGKE+K AV+VGT+TDDIRVYEVPALKV ALRFTETARARIEKAGGECLTFDQLAL
Subjt:  LLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLAL

Query:  RAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV
        RAPLGQNTVLLRG KNSREAVKHFGPAPGVPHSHTKPYVR+KGRKFE+ARGKRNS+GFRV
Subjt:  RAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV

A0A6A1UNZ6 60S ribosomal protein L18-34.0e-18082.66Show/hide
Query:  RFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQY----------------
        +FS+E+VSAQNQVKASVQRKI+QSIAEEYPGLEPVLDDLLPKK+PLIV KCQNHLNLV+VNNVPLFFN+RDGPYMPTLRLLHQ                 
Subjt:  RFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQY----------------

Query:  -----------------------PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGV
                               PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALD++V A+TPVAIMAEGK+HALAIGFTKMSAK+I+A NKGIGV
Subjt:  -----------------------PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGV

Query:  DNMHYLNDGLWKGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDI
        DNMHYLNDGLWKGIDLVAGGKSKK+KRTAPKSDDIYLKLLVKLYRFLVRRTGS FNAVILKRLFMS+VNKPPLSLSRLI++ KGK+ KIAVVVGT+TDDI
Subjt:  DNMHYLNDGLWKGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDI

Query:  RVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV
        RVYEVPALKV ALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRG KN+REAVKHFGPAPGVPHSHTKPYVR+KGRKFERARGKRNSRGFRV
Subjt:  RVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV

B9RFD6 60S ribosomal protein L18, putative1.4e-18083.5Show/hide
Query:  RFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF
        +FS+++VS+QNQVKASVQRKIRQSIA+EYPGLEPVLDDLLPKK+PLIV KCQNHLNLV+VN+VPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF
Subjt:  RFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF

Query:  VLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWK---------------------------
        VLAGANIMCPGLTSPGGALD+EVEA+TPVAIMAEGKQHALAIGFTKMSAK+I+  NKGIGVDNMHYLNDGLWK                           
Subjt:  VLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWK---------------------------

Query:  --------GIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYE
                GIDL AGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMS++NK PLSLSRLI F KGKESK AVVVGT+TDDIRVYE
Subjt:  --------GIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYE

Query:  VPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV
        VPALKV AL+FTETARARIEKAGGECLTFDQLA+RAPLGQNTVLLRG KN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFERARG+RNSRGFRV
Subjt:  VPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV

SwissProt top hitse value%identityAlignment
O22254 Putative 60S ribosomal protein L18-15.2e-7677.54Show/hide
Query:  GIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAA
        GIDL+AGGKSKKTKRT PKSDD+YLKLLVK  R+LVRRT SKFNAVILKRLFMS+VNK PLSLSRL+++  GK+ KIAV+VGT+TDD+R+ +VPAL V A
Subjt:  GIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAA

Query:  LRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV
        LRFTE+ARARI KAGGECLTFDQLAL  P   +NTVLLRG KN+REAVKHFGPAPGVPHSHTKPYVR  G+K E ARG+R SRGF+V
Subjt:  LRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV

O65729 60S ribosomal protein L18 (Fragment)1.2e-8083.15Show/hide
Query:  DLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALR
        DL AGGK+KKTKRT+PKS+DIYLKLLVKLYRFLVRRT S FNAVILKRLFMS+VN+PPLSLSRLI++ +GKE KI VVVG +TDDIRVY+VP +KV AL+
Subjt:  DLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALR

Query:  FTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV
        FTETARARI+KAGGECLTFDQLALR PL  +TVLLRG KN+REAVKHFGPAPGVPHSHTKPYVRSKGRKFE+ARG+R SRGFRV
Subjt:  FTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV

P42791 60S ribosomal protein L18-26.6e-8786.56Show/hide
Query:  GIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAA
        GIDL+AGGKSKKTKRTAPKSDD+YLKL VKLYRFLVRRT SKFN VILKRLFMS+VNK PLSLSRL++F  GKE KIAV+VGTITDD+RV+E+PA+KV A
Subjt:  GIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAA

Query:  LRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV
        LRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRG KNSREAVKHFGPAPGVPHSH+KPYVR+KGRKFE+ARGKR SRGF+V
Subjt:  LRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV

Q4GXG7 60S ribosomal protein L185.1e-6366.67Show/hide
Query:  KKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTK--GKESKIAVVVGTITDDIRVYEVPALKVAALRFTETAR
        +K +RT PKS D+YL+LLVKLYR+L RRTG+KFN +ILKRLFMS++ +PP+SLS++++F K  G+E   AV+VGT+TDD R++E+P L + ALR T+TAR
Subjt:  KKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTK--GKESKIAVVVGTITDDIRVYEVPALKVAALRFTETAR

Query:  ARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFR
        A I KAGGE +TFDQLALR+P G  TVLL+G +N+REAVKHFGPAPGVPHSH KP VRSKGRKFERARG+R S G++
Subjt:  ARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFR

Q940B0 60S ribosomal protein L18-35.5e-8686.02Show/hide
Query:  GIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAA
        GIDL+AGGKSKKTKRTAPKSDD+YLKLLVKLYRFLVRR+ S FNAVILKRLFMS+VNK PLSLSRL++F  GK+ KIAV+VGTITDD+RV+E+PA+KV A
Subjt:  GIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAA

Query:  LRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV
        LRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRG KNSREAVKHFGPAPGVPHS+TKPYVR KGRKFE+ARGKR SRGF+V
Subjt:  LRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV

Arabidopsis top hitse value%identityAlignment
AT1G09150.1 pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein1.9e-8183.24Show/hide
Query:  RFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF
        +F  E++S+QNQVKASVQR+IRQSI +EYPGLE V++DLLPKK PLIV KC NHL LVVVNNVPLFF IRDGPYMPTLRLLHQYPNIMK+ QVDRGAIKF
Subjt:  RFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKF

Query:  VLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWK
        VL+GANIMCPGLTSPGG LD EVEA+ PVAI AEGKQHALAIGFTKMSAK+I++ NKGIGVDNMHYLNDGLWK
Subjt:  VLAGANIMCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWK

AT2G47570.1 Ribosomal protein L18e/L15 superfamily protein1.6e-5174.07Show/hide
Query:  MSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGSKNSREAVKHFG
        MS+VNK PLSLSRL+++  GK+ KIAV+VGT+TDD+R+ +VPAL V ALRFTE+ARARI KAGGECLTFDQLAL  P   +NTVLLRG KN+REAVKHFG
Subjt:  MSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGSKNSREAVKHFG

Query:  PAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV
        PAPGVPHSHTKPYVR  G+K E ARG+R SRGF+V
Subjt:  PAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV

AT2G47570.2 Ribosomal protein L18e/L15 superfamily protein1.6e-5174.07Show/hide
Query:  MSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGSKNSREAVKHFG
        MS+VNK PLSLSRL+++  GK+ KIAV+VGT+TDD+R+ +VPAL V ALRFTE+ARARI KAGGECLTFDQLAL  P   +NTVLLRG KN+REAVKHFG
Subjt:  MSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGSKNSREAVKHFG

Query:  PAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV
        PAPGVPHSHTKPYVR  G+K E ARG+R SRGF+V
Subjt:  PAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV

AT3G05590.1 ribosomal protein L184.7e-8886.56Show/hide
Query:  GIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAA
        GIDL+AGGKSKKTKRTAPKSDD+YLKL VKLYRFLVRRT SKFN VILKRLFMS+VNK PLSLSRL++F  GKE KIAV+VGTITDD+RV+E+PA+KV A
Subjt:  GIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAA

Query:  LRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV
        LRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRG KNSREAVKHFGPAPGVPHSH+KPYVR+KGRKFE+ARGKR SRGF+V
Subjt:  LRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV

AT5G27850.1 Ribosomal protein L18e/L15 superfamily protein3.9e-8786.02Show/hide
Query:  GIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAA
        GIDL+AGGKSKKTKRTAPKSDD+YLKLLVKLYRFLVRR+ S FNAVILKRLFMS+VNK PLSLSRL++F  GK+ KIAV+VGTITDD+RV+E+PA+KV A
Subjt:  GIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAA

Query:  LRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV
        LRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRG KNSREAVKHFGPAPGVPHS+TKPYVR KGRKFE+ARGKR SRGF+V
Subjt:  LRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTCATTTTAGGTTTTCTACTGAAGACGTGTCTGCTCAGAACCAAGTCAAGGCATCAGTGCAACGGAAAATTCGGCAAAGTATAGCTGAAGAATATCCTGGGCTAGAGCC
AGTCTTGGATGATTTGCTTCCTAAAAAAGCCCCTCTGATTGTAACTAAGTGTCAAAACCATCTCAATCTGGTTGTTGTGAATAATGTGCCACTCTTTTTCAACATCCGTG
ATGGACCATACATGCCTACCCTAAGGTTGCTTCACCAATATCCTAATATTATGAAGAAATTACAAGTAGACAGAGGTGCAATAAAGTTTGTCCTTGCTGGTGCTAACATA
ATGTGTCCTGGTCTTACATCCCCTGGGGGTGCCTTGGACGACGAAGTCGAAGCGGATACGCCTGTGGCAATAATGGCAGAAGGGAAGCAACATGCTCTTGCTATTGGCTT
CACAAAGATGTCAGCCAAGGAAATAAGGGCGACAAACAAAGGGATCGGTGTGGACAATATGCATTATCTTAACGATGGTCTTTGGAAGGGGATCGATCTCGTCGCAGGAG
GTAAGAGCAAGAAGACCAAGAGGACTGCGCCCAAATCAGATGATATCTACCTCAAGTTACTCGTCAAGCTTTACCGCTTCCTTGTTCGCCGCACTGGAAGCAAATTCAAT
GCGGTCATTCTCAAGCGTTTGTTTATGAGCAGGGTTAACAAGCCTCCACTTTCACTCTCTAGACTTATCCAGTTTACAAAAGGAAAGGAAAGCAAGATTGCCGTCGTTGT
TGGTACTATTACCGATGATATTCGTGTCTATGAAGTTCCAGCATTGAAAGTTGCTGCTCTCAGGTTTACTGAGACAGCAAGGGCAAGGATTGAGAAGGCTGGTGGGGAGT
GTTTGACATTTGACCAGCTTGCTTTGAGGGCTCCTCTGGGTCAGAACACGGTTCTCCTTAGAGGTTCCAAGAATTCCCGAGAGGCTGTGAAGCATTTCGGTCCTGCACCG
GGTGTACCGCACAGTCACACCAAACCATATGTGAGGTCCAAGGGAAGAAAGTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGTTTTAGGGTT
mRNA sequenceShow/hide mRNA sequence
TTTCATTTTAGGTTTTCTACTGAAGACGTGTCTGCTCAGAACCAAGTCAAGGCATCAGTGCAACGGAAAATTCGGCAAAGTATAGCTGAAGAATATCCTGGGCTAGAGCC
AGTCTTGGATGATTTGCTTCCTAAAAAAGCCCCTCTGATTGTAACTAAGTGTCAAAACCATCTCAATCTGGTTGTTGTGAATAATGTGCCACTCTTTTTCAACATCCGTG
ATGGACCATACATGCCTACCCTAAGGTTGCTTCACCAATATCCTAATATTATGAAGAAATTACAAGTAGACAGAGGTGCAATAAAGTTTGTCCTTGCTGGTGCTAACATA
ATGTGTCCTGGTCTTACATCCCCTGGGGGTGCCTTGGACGACGAAGTCGAAGCGGATACGCCTGTGGCAATAATGGCAGAAGGGAAGCAACATGCTCTTGCTATTGGCTT
CACAAAGATGTCAGCCAAGGAAATAAGGGCGACAAACAAAGGGATCGGTGTGGACAATATGCATTATCTTAACGATGGTCTTTGGAAGGGGATCGATCTCGTCGCAGGAG
GTAAGAGCAAGAAGACCAAGAGGACTGCGCCCAAATCAGATGATATCTACCTCAAGTTACTCGTCAAGCTTTACCGCTTCCTTGTTCGCCGCACTGGAAGCAAATTCAAT
GCGGTCATTCTCAAGCGTTTGTTTATGAGCAGGGTTAACAAGCCTCCACTTTCACTCTCTAGACTTATCCAGTTTACAAAAGGAAAGGAAAGCAAGATTGCCGTCGTTGT
TGGTACTATTACCGATGATATTCGTGTCTATGAAGTTCCAGCATTGAAAGTTGCTGCTCTCAGGTTTACTGAGACAGCAAGGGCAAGGATTGAGAAGGCTGGTGGGGAGT
GTTTGACATTTGACCAGCTTGCTTTGAGGGCTCCTCTGGGTCAGAACACGGTTCTCCTTAGAGGTTCCAAGAATTCCCGAGAGGCTGTGAAGCATTTCGGTCCTGCACCG
GGTGTACCGCACAGTCACACCAAACCATATGTGAGGTCCAAGGGAAGAAAGTTTGAGAGGGCTAGAGGAAAGAGAAACAGCAGGGGTTTTAGGGTT
Protein sequenceShow/hide protein sequence
FHFRFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANI
MCPGLTSPGGALDDEVEADTPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFN
AVILKRLFMSRVNKPPLSLSRLIQFTKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGSKNSREAVKHFGPAP
GVPHSHTKPYVRSKGRKFERARGKRNSRGFRV