; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022779 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022779
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionrho-N domain-containing protein 1, chloroplastic-like isoform X1
Genome locationscaffold73:410850..412058
RNA-Seq ExpressionMS022779
SyntenyMS022779
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
InterPro domainsIPR011112 - Rho termination factor, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151986.1 rho-N domain-containing protein 1, chloroplastic isoform X1 [Cucumis sativus]1.3e-15776.66Show/hide
Query:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
        GFGLSD RC+PCSGVSGRAA  S  SL  EHRIN  VKF  LNCTSLG S TC A+SGGHRRNPDF KQNRHGFSR RNRQNEER+ L+N++ESDLL SK
Subjt:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK

Query:  NGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND
        NGPLLS+ SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK+EAQG TKGSETVDSLLKLLRKHSVEQGKRSSG   S  KD SFN VKEN 
Subjt:  NGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND

Query:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP
        PYDEG+G+S FGLS NLREK Q        RP+SNFQR+SPVPRVKYQPIYPGE SIV ST+G+NS+G+K NG +TGS++K KVW R+ES+RE W+ELQ 
Subjt:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP

Query:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEK-----HEDLNSLKLAELRAIAKSRGLKRFSKIKKSELV
        QRE    P+PD EFELEPE E+Y+LEHE DEMEPELVNLL VSSDV+DTF+DDVKDNE F K     HEDLNSLKLAELRAIAKSR L+ FSK+KKSELV
Subjt:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEK-----HEDLNSLKLAELRAIAKSRGLKRFSKIKKSELV

Query:  QLLSEAQ
        QLLS  Q
Subjt:  QLLSEAQ

XP_022155658.1 rho-N domain-containing protein 1, chloroplastic-like isoform X1 [Momordica charantia]1.2e-21499.01Show/hide
Query:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
        GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGAS TCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
Subjt:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK

Query:  NGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND
        NGPLLSLSSSTPKSQATATPGPREKEIVELFR+VQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND
Subjt:  NGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND

Query:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP
        PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVEST GVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP
Subjt:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP

Query:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIKKSELVQLLSE
        QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKI+KSELVQLLSE
Subjt:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIKKSELVQLLSE

Query:  AQE
        AQE
Subjt:  AQE

XP_022155659.1 rho-N domain-containing protein 1, chloroplastic-like isoform X2 [Momordica charantia]4.1e-21298.5Show/hide
Query:  LSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKNGP
        ++DGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGAS TCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKNGP
Subjt:  LSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKNGP

Query:  LLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYD
        LLSLSSSTPKSQATATPGPREKEIVELFR+VQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYD
Subjt:  LLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYD

Query:  EGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRE
        EGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVEST GVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRE
Subjt:  EGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRE

Query:  TGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIKKSELVQLLSEAQE
        TGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKI+KSELVQLLSEAQE
Subjt:  TGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIKKSELVQLLSEAQE

XP_038887988.1 rho-N domain-containing protein 1, chloroplastic-like isoform X1 [Benincasa hispida]1.0e-16280.3Show/hide
Query:  FGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKN
        FGLSD RC+PCSGVSGRAA VSSRSL  EHRI+A+VKF  LNCTSLGAS TC A+SGGHRRNPDFSKQNRHGFSR RNRQNEER+ L+N++ESDLLSSKN
Subjt:  FGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKN

Query:  GPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGG---KDFSFNQVKE
        GPLLS+ SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK+EAQG TKGSETVDSLLKLLRKHSVEQGKRSSG  S GG   KDF+FN VKE
Subjt:  GPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGG---KDFSFNQVKE

Query:  NDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREES-KRESWKE
        N  YDEGKGTSIFGLSANLREK QEPT  SFSRP+SNFQRKSPVPRVKYQPI+PGE SIV+STDGVNS+G+K NG ET S++K+KVW R+ES +R  W+E
Subjt:  NDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREES-KRESWKE

Query:  LQPQRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEK---HEDLNSLKLAELRAIAKSRGLKRFSKIKKSEL
        LQ Q ET   P+ D E+ELEPE ESYELEH+PDE E ELVNLL VSSD++DTFDDDVKDNE F K   HEDLNSLK+AELRAIAKSR LK FSK+KKSEL
Subjt:  LQPQRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEK---HEDLNSLKLAELRAIAKSRGLKRFSKIKKSEL

Query:  VQLLSE
        VQLLS+
Subjt:  VQLLSE

XP_038887989.1 rho-N domain-containing protein 1, chloroplastic-like isoform X2 [Benincasa hispida]4.3e-16179.95Show/hide
Query:  LSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKNGP
        L+D RC+PCSGVSGRAA VSSRSL  EHRI+A+VKF  LNCTSLGAS TC A+SGGHRRNPDFSKQNRHGFSR RNRQNEER+ L+N++ESDLLSSKNGP
Subjt:  LSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKNGP

Query:  LLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGG---KDFSFNQVKEND
        LLS+ SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK+EAQG TKGSETVDSLLKLLRKHSVEQGKRSSG  S GG   KDF+FN VKEN 
Subjt:  LLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGG---KDFSFNQVKEND

Query:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREES-KRESWKELQ
         YDEGKGTSIFGLSANLREK QEPT  SFSRP+SNFQRKSPVPRVKYQPI+PGE SIV+STDGVNS+G+K NG ET S++K+KVW R+ES +R  W+ELQ
Subjt:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREES-KRESWKELQ

Query:  PQRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEK---HEDLNSLKLAELRAIAKSRGLKRFSKIKKSELVQ
         Q ET   P+ D E+ELEPE ESYELEH+PDE E ELVNLL VSSD++DTFDDDVKDNE F K   HEDLNSLK+AELRAIAKSR LK FSK+KKSELVQ
Subjt:  PQRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEK---HEDLNSLKLAELRAIAKSRGLKRFSKIKKSELVQ

Query:  LLSE
        LLS+
Subjt:  LLSE

TrEMBL top hitse value%identityAlignment
A0A0A0L7X8 Rho_N domain-containing protein6.3e-15876.66Show/hide
Query:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
        GFGLSD RC+PCSGVSGRAA  S  SL  EHRIN  VKF  LNCTSLG S TC A+SGGHRRNPDF KQNRHGFSR RNRQNEER+ L+N++ESDLL SK
Subjt:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK

Query:  NGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND
        NGPLLS+ SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK+EAQG TKGSETVDSLLKLLRKHSVEQGKRSSG   S  KD SFN VKEN 
Subjt:  NGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND

Query:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP
        PYDEG+G+S FGLS NLREK Q        RP+SNFQR+SPVPRVKYQPIYPGE SIV ST+G+NS+G+K NG +TGS++K KVW R+ES+RE W+ELQ 
Subjt:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP

Query:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEK-----HEDLNSLKLAELRAIAKSRGLKRFSKIKKSELV
        QRE    P+PD EFELEPE E+Y+LEHE DEMEPELVNLL VSSDV+DTF+DDVKDNE F K     HEDLNSLKLAELRAIAKSR L+ FSK+KKSELV
Subjt:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEK-----HEDLNSLKLAELRAIAKSRGLKRFSKIKKSELV

Query:  QLLSEAQ
        QLLS  Q
Subjt:  QLLSEAQ

A0A1S4DXI1 rho-N domain-containing protein 1, chloroplastic isoform X41.5e-15676.73Show/hide
Query:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
        GFGLSD RC+PCSGVSGRAA  S RSL  EH IN  VKF  LNCTSLG S TC A+S GHRRNPDF KQNR G+SR RNRQNEER+ LEN++ESDLLSS+
Subjt:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK

Query:  NGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND
        NGPLLS+ SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQG TKGSETVDSLLKLLRKH+VEQGKRSSG+  S  KD SFN VKEN 
Subjt:  NGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND

Query:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP
        PYDEG+G+SIFGLS NLREK QEP   SF RP SNFQR+SPVPRVKYQPIYPGE SIV+ST+G+NS+G+K NG ETGS++K+KVW R+ES+RE W+ELQ 
Subjt:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP

Query:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEK---HEDLNSLKLAELRAIAKSRGLKRFSKIKKSELVQL
        QR+T   P+ D EFE+EPE E+Y+LEHE DEMEPELVNLL VSSD++DTF+DD+KDNE F K   HE+LNSLKLAELRAIAKSR L+ FSK+KKSELVQL
Subjt:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEK---HEDLNSLKLAELRAIAKSRGLKRFSKIKKSELVQL

Query:  LSEA
        LS +
Subjt:  LSEA

A0A5D3DAG1 Rho-N domain-containing protein 11.5e-15676.73Show/hide
Query:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
        GFGLSD RC+PCSGVSGRAA  S RSL  EH IN  VKF  LNCTSLG S TC A+S GHRRNPDF KQNR G+SR RNRQNEER+ LEN++ESDLLSS+
Subjt:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK

Query:  NGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND
        NGPLLS+ SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQG TKGSETVDSLLKLLRKH+VEQGKRSSG+  S  KD SFN VKEN 
Subjt:  NGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND

Query:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP
        PYDEG+G+SIFGLS NLREK QEP   SF RP SNFQR+SPVPRVKYQPIYPGE SIV+ST+G+NS+G+K NG ETGS++K+KVW R+ES+RE W+ELQ 
Subjt:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP

Query:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEK---HEDLNSLKLAELRAIAKSRGLKRFSKIKKSELVQL
        QR+T   P+ D EFE+EPE E+Y+LEHE DEMEPELVNLL VSSD++DTF+DD+KDNE F K   HE+LNSLKLAELRAIAKSR L+ FSK+KKSELVQL
Subjt:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEK---HEDLNSLKLAELRAIAKSRGLKRFSKIKKSELVQL

Query:  LSEA
        LS +
Subjt:  LSEA

A0A6J1DNJ1 rho-N domain-containing protein 1, chloroplastic-like isoform X15.6e-21599.01Show/hide
Query:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
        GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGAS TCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
Subjt:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK

Query:  NGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND
        NGPLLSLSSSTPKSQATATPGPREKEIVELFR+VQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND
Subjt:  NGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKEND

Query:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP
        PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVEST GVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP
Subjt:  PYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQP

Query:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIKKSELVQLLSE
        QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKI+KSELVQLLSE
Subjt:  QRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIKKSELVQLLSE

Query:  AQE
        AQE
Subjt:  AQE

A0A6J1DQX2 rho-N domain-containing protein 1, chloroplastic-like isoform X22.0e-21298.5Show/hide
Query:  LSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKNGP
        ++DGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGAS TCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKNGP
Subjt:  LSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKNGP

Query:  LLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYD
        LLSLSSSTPKSQATATPGPREKEIVELFR+VQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYD
Subjt:  LLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYD

Query:  EGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRE
        EGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVEST GVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRE
Subjt:  EGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRE

Query:  TGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIKKSELVQLLSEAQE
        TGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKI+KSELVQLLSEAQE
Subjt:  TGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIKKSELVQLLSEAQE

SwissProt top hitse value%identityAlignment
Q8L4E7 SAP-like protein BP-734.5e-3637.5Show/hide
Query:  KFPTLNCTSLGASLTCNATSGGHR-RNPDFSKQNRHGFSRGRNRQNEERDGLENLEE--SDLLSSKNGPLLSLSSSTPKSQATATPGPREKEIVELFRKV
        K P L    L  SL C+A    HR R+ D ++  + G +R +++  +E+D  EN++E  +D++SSKNGP +SL+S++ + QAT+ PG REKEIVELF++V
Subjt:  KFPTLNCTSLGASLTCNATSGGHR-RNPDFSKQNRHGFSRGRNRQNEERDGLENLEE--SDLLSSKNGPLLSLSSSTPKSQATATPGPREKEIVELFRKV

Query:  QAQLRERAAMKEEKKMEAQGHTKGSE-TVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPI
        QAQLR R   KEEKK E Q   +G   +VDSLL LLRKHSV+Q +R SG      K+ S +Q K ++     + +SIF +  + +E+ ++P  ++F RP 
Subjt:  QAQLRERAAMKEEKKMEAQGHTKGSE-TVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPI

Query:  SNFQRKSPVPRVKYQPI--YPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRETGPGPDPDPEFELEPEPESYELEHEPDE
        SNF+R+SPVP VK+QP+     E  I    D V          E    +++K  A +E    S  E     E       D +   + EP++ + +    E
Subjt:  SNFQRKSPVPRVKYQPI--YPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRETGPGPDPDPEFELEPEPESYELEHEPDE

Query:  MEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIKKSELVQLLS
         +   + + +V   ++++ D  +K +       DL++LK+ ELR +AKSRG+K +SK+KK++LV+LLS
Subjt:  MEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIKKSELVQLLS

Q94K75 Rho-N domain-containing protein 1, chloroplastic4.5e-6044.42Show/hide
Query:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
        G+ LSD RC   S VS R   +   S  ++H+       P        +S  C A+SGG+RRNPDFS+ N+HG+ RG NRQ+  R+  + +E SD+LSS+
Subjt:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK

Query:  NGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRER-AAMKEEKKME--AQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVK
        NGPL +LSSS PK QAT++PGPREKEIVELFRKVQAQLR R AA KEEKK+E  ++G  K SETVDSLLKLLRKHS EQ KR     SS G+        
Subjt:  NGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRER-AAMKEEKKME--AQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVK

Query:  ENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRES--W
        + D  D+   T     S N     ++   SSF+RP S+F+RKSPVPR +  P Y  E +  +S+          +   T ++ K  V   +E + E    
Subjt:  ENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRES--W

Query:  KELQPQRETGPGPDP---DPEFELEPEPESYELEHEPDEMEPELVN----LLTVSSDVNDTFDDDVKDNENFEKH--EDLNSLKLAELRAIAKSRGLKRF
         E +P+ E+ PGP     +P+ EL+PE  S+  E E D++  ++++    +L V SD +++ DD  +D++  E+   +DL+ LKL ELR IAKSRGLK  
Subjt:  KELQPQRETGPGPDP---DPEFELEPEPESYELEHEPDEMEPELVN----LLTVSSDVNDTFDDDVKDNENFEKH--EDLNSLKLAELRAIAKSRGLKRF

Query:  SKIKKSELVQLL
        SK+KK+ELV+LL
Subjt:  SKIKKSELVQLL

Arabidopsis top hitse value%identityAlignment
AT1G06190.1 Rho termination factor3.2e-6144.42Show/hide
Query:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
        G+ LSD RC   S VS R   +   S  ++H+       P        +S  C A+SGG+RRNPDFS+ N+HG+ RG NRQ+  R+  + +E SD+LSS+
Subjt:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK

Query:  NGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRER-AAMKEEKKME--AQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVK
        NGPL +LSSS PK QAT++PGPREKEIVELFRKVQAQLR R AA KEEKK+E  ++G  K SETVDSLLKLLRKHS EQ KR     SS G+        
Subjt:  NGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRER-AAMKEEKKME--AQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVK

Query:  ENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRES--W
        + D  D+   T     S N     ++   SSF+RP S+F+RKSPVPR +  P Y  E +  +S+          +   T ++ K  V   +E + E    
Subjt:  ENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRES--W

Query:  KELQPQRETGPGPDP---DPEFELEPEPESYELEHEPDEMEPELVN----LLTVSSDVNDTFDDDVKDNENFEKH--EDLNSLKLAELRAIAKSRGLKRF
         E +P+ E+ PGP     +P+ EL+PE  S+  E E D++  ++++    +L V SD +++ DD  +D++  E+   +DL+ LKL ELR IAKSRGLK  
Subjt:  KELQPQRETGPGPDP---DPEFELEPEPESYELEHEPDEMEPELVN----LLTVSSDVNDTFDDDVKDNENFEKH--EDLNSLKLAELRAIAKSRGLKRF

Query:  SKIKKSELVQLL
        SK+KK+ELV+LL
Subjt:  SKIKKSELVQLL

AT1G06190.2 Rho termination factor1.7e-4649.24Show/hide
Query:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK
        G+ LSD RC   S VS R   +   S  ++H+       P        +S  C A+SGG+RRNPDFS+ N+HG+ RG NRQ+  R+  + +E SD+LSS+
Subjt:  GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSK

Query:  NGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRER-AAMKEEKKME--AQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVK
        NGPL +LSSS PK QAT++PGPREKEIVELFRKVQAQLR R AA KEEKK+E  ++G  K SETVDSLLKLLRKHS EQ KR     SS G+        
Subjt:  NGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRER-AAMKEEKKME--AQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVK

Query:  ENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVEST
        + D  D+   T     S N     ++   SSF+RP S+F+RKSPVPR +  P Y  E +  +S+
Subjt:  ENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVEST

AT2G31150.1 ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism5.1e-2739.68Show/hide
Query:  HRR-NPDFSKQNRHGFSRGRNRQNEERDGL-ENLEESDLLSSKNGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRER-AAMKEEKKMEAQGHT
        HRR NPDFS+ N+HGF RGRNR+NE++DGL +   E D+LSSKN                      EKEIVELF+KVQ QLR R AA KEEKK E     
Subjt:  HRR-NPDFSKQNRHGFSRGRNRQNEERDGL-ENLEESDLLSSKNGPLLSLSSSTPKSQATATPGPREKEIVELFRKVQAQLRER-AAMKEEKKMEAQGHT

Query:  KG---SETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPG
        +G   SETVDSLLKLLRKHS EQ K+   + +S        Q++ +D   E +  S    S+    + ++   + F+RP S+F+R SPVPR K Q  Y  
Subjt:  KG---SETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYDEGKGTSIFGLSANLREKTQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPG

Query:  EDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTF---
        E    E++                    S  W +++ + ES  E  P+ E  P P+   E++ EPEPE+   E+EP E EPEL  L +VS    ++F   
Subjt:  EDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRETGPGPDPDPEFELEPEPESYELEHEPDEMEPELVNLLTVSSDVNDTF---

Query:  DDDVKDNENF
        +D+ +++ NF
Subjt:  DDDVKDNENF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTTTTGGACTGTCAGATGGCAGATGCGTACCATGCTCTGGAGTTTCAGGACGAGCGGCCCCAGTCTCTTCTCGCTCTTTATATGTTGAACATAGAATTAATGCACAGGT
CAAATTCCCAACCCTAAACTGTACTTCATTGGGGGCTTCTTTAACGTGCAATGCAACCTCGGGCGGTCACAGGAGAAACCCAGATTTCTCTAAGCAGAATAGGCATGGAT
TTTCTAGAGGCAGAAATAGGCAAAATGAGGAGAGAGATGGCCTTGAAAATCTTGAAGAATCCGATTTATTATCATCTAAGAATGGACCATTACTCTCCCTTTCTAGTAGT
ACCCCTAAATCCCAAGCCACTGCCACCCCAGGCCCAAGGGAGAAAGAAATTGTTGAACTTTTCAGGAAGGTTCAAGCTCAGCTACGGGAGCGAGCTGCAATGAAAGAAGA
AAAGAAAATGGAAGCACAAGGGCACACGAAAGGGAGTGAAACTGTGGATTCTCTTCTTAAGCTATTGAGAAAGCATTCGGTTGAGCAAGGAAAGAGAAGCAGTGGTAGCA
GCAGCAGTGGGGGCAAGGACTTCAGTTTCAACCAAGTTAAAGAGAATGATCCATACGATGAAGGCAAAGGCACAAGCATTTTTGGCTTAAGTGCAAACCTGAGAGAGAAG
ACACAAGAACCAACCAGATCTTCTTTCAGTAGACCCATATCAAATTTTCAACGTAAATCCCCCGTGCCTCGGGTGAAATACCAACCAATTTACCCTGGGGAGGACAGTAT
TGTTGAGTCCACTGATGGTGTGAATTCAAGGGGGTTGAAATTCAATGGAATCGAGACAGGTTCTGAGATGAAGTCGAAGGTTTGGGCACGGGAAGAGTCAAAACGAGAGT
CGTGGAAAGAGCTGCAACCGCAAAGAGAGACAGGGCCAGGGCCAGACCCAGACCCAGAGTTTGAGTTGGAGCCAGAGCCTGAATCATATGAGCTAGAGCATGAACCTGAT
GAGATGGAGCCTGAACTGGTTAATTTATTAACTGTGTCTTCAGATGTCAATGATACATTTGATGACGATGTTAAAGACAATGAAAATTTTGAAAAGCACGAGGACTTGAA
CTCATTGAAGCTAGCTGAACTGAGGGCAATTGCCAAATCACGCGGTTTGAAACGGTTCTCGAAGATAAAGAAGAGCGAGCTTGTGCAGTTGCTAAGCGAGGCTCAAGAA
mRNA sequenceShow/hide mRNA sequence
GGTTTTGGACTGTCAGATGGCAGATGCGTACCATGCTCTGGAGTTTCAGGACGAGCGGCCCCAGTCTCTTCTCGCTCTTTATATGTTGAACATAGAATTAATGCACAGGT
CAAATTCCCAACCCTAAACTGTACTTCATTGGGGGCTTCTTTAACGTGCAATGCAACCTCGGGCGGTCACAGGAGAAACCCAGATTTCTCTAAGCAGAATAGGCATGGAT
TTTCTAGAGGCAGAAATAGGCAAAATGAGGAGAGAGATGGCCTTGAAAATCTTGAAGAATCCGATTTATTATCATCTAAGAATGGACCATTACTCTCCCTTTCTAGTAGT
ACCCCTAAATCCCAAGCCACTGCCACCCCAGGCCCAAGGGAGAAAGAAATTGTTGAACTTTTCAGGAAGGTTCAAGCTCAGCTACGGGAGCGAGCTGCAATGAAAGAAGA
AAAGAAAATGGAAGCACAAGGGCACACGAAAGGGAGTGAAACTGTGGATTCTCTTCTTAAGCTATTGAGAAAGCATTCGGTTGAGCAAGGAAAGAGAAGCAGTGGTAGCA
GCAGCAGTGGGGGCAAGGACTTCAGTTTCAACCAAGTTAAAGAGAATGATCCATACGATGAAGGCAAAGGCACAAGCATTTTTGGCTTAAGTGCAAACCTGAGAGAGAAG
ACACAAGAACCAACCAGATCTTCTTTCAGTAGACCCATATCAAATTTTCAACGTAAATCCCCCGTGCCTCGGGTGAAATACCAACCAATTTACCCTGGGGAGGACAGTAT
TGTTGAGTCCACTGATGGTGTGAATTCAAGGGGGTTGAAATTCAATGGAATCGAGACAGGTTCTGAGATGAAGTCGAAGGTTTGGGCACGGGAAGAGTCAAAACGAGAGT
CGTGGAAAGAGCTGCAACCGCAAAGAGAGACAGGGCCAGGGCCAGACCCAGACCCAGAGTTTGAGTTGGAGCCAGAGCCTGAATCATATGAGCTAGAGCATGAACCTGAT
GAGATGGAGCCTGAACTGGTTAATTTATTAACTGTGTCTTCAGATGTCAATGATACATTTGATGACGATGTTAAAGACAATGAAAATTTTGAAAAGCACGAGGACTTGAA
CTCATTGAAGCTAGCTGAACTGAGGGCAATTGCCAAATCACGCGGTTTGAAACGGTTCTCGAAGATAAAGAAGAGCGAGCTTGTGCAGTTGCTAAGCGAGGCTCAAGAA
Protein sequenceShow/hide protein sequence
GFGLSDGRCVPCSGVSGRAAPVSSRSLYVEHRINAQVKFPTLNCTSLGASLTCNATSGGHRRNPDFSKQNRHGFSRGRNRQNEERDGLENLEESDLLSSKNGPLLSLSSS
TPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGHTKGSETVDSLLKLLRKHSVEQGKRSSGSSSSGGKDFSFNQVKENDPYDEGKGTSIFGLSANLREK
TQEPTRSSFSRPISNFQRKSPVPRVKYQPIYPGEDSIVESTDGVNSRGLKFNGIETGSEMKSKVWAREESKRESWKELQPQRETGPGPDPDPEFELEPEPESYELEHEPD
EMEPELVNLLTVSSDVNDTFDDDVKDNENFEKHEDLNSLKLAELRAIAKSRGLKRFSKIKKSELVQLLSEAQE