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MS022800 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022800
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSuccinate dehydrogenase subunit 3
Genome locationscaffold29:3264..3554
RNA-Seq ExpressionMS022800
SyntenyMS022800
Gene Ontology termsGO:0006099 - tricarboxylic acid cycle (biological process)
GO:0006121 - mitochondrial electron transport, succinate to ubiquinone (biological process)
GO:0005749 - mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0000104 - succinate dehydrogenase activity (molecular function)
GO:0009055 - electron transfer activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000701 - Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit
IPR014314 - Succinate dehydrogenase, cytochrome b556 subunit
IPR034804 - Fumarate reductase/succinate dehydrogenase, transmembrane subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHJ80994.1 succinate dehydrogenase subunit 3 [Panax ginseng]4.1e-4194.62Show/hide
Query:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD
        MN+LRPLSPHLP+YKPQLTSTFPISHRISGAFLAT+VLFFYLLCLKMGLICFTYENFY FFFYSSKLILISVEITALALSYHLYNG+RHLLTD
Subjt:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD

QPF97844.1 succinate dehydrogenase subunit 3 [Solanum bukasovii]2.6e-4095.7Show/hide
Query:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD
        MNILRPLSPHLPIYKPQLTSTF ISHRISGAFLAT+V FFYLLCLKMGLICFTYENFY FFFYSSKLILISVEITALALSYHLYNGVRHLLTD
Subjt:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD

YP_009519741.1 succinate dehydrogenase subunit 3 [Nepenthes ventricosa x Nepenthes alata]3.1e-4196.77Show/hide
Query:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD
        MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLAT+VLFFYLLCLK+GLICFTYENFY FFFYSSKLILISVEITALALSYHLYNGVRHLLTD
Subjt:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD

YP_009704561.1 succinate dehydrogenase subunit 3 [Spondias mombin]3.1e-4197.85Show/hide
Query:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD
        MN LRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFY FFFYSSKLILISVEITALALSYHLYNGVRHLLTD
Subjt:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD

YP_009913618.1 succinate dehydrogenase subunit 3 [Luffa acutangula]6.3e-4298.92Show/hide
Query:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD
        MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFY FFFYSSKLILISVEITALALSYHLYNGVRHLLTD
Subjt:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD

TrEMBL top hitse value%identityAlignment
A0A096XF76 Succinate dehydrogenase subunit 32.0e-4194.62Show/hide
Query:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD
        MN+LRPLSPHLP+YKPQLTSTFPISHRISGAFLAT+VLFFYLLCLKMGLICFTYENFY FFFYSSKLILISVEITALALSYHLYNG+RHLLTD
Subjt:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD

A0A385Y467 Succinate dehydrogenase subunit 31.5e-4196.77Show/hide
Query:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD
        MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLAT+VLFFYLLCLK+GLICFTYENFY FFFYSSKLILISVEITALALSYHLYNGVRHLLTD
Subjt:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD

A0A5C2FU18 Succinate dehydrogenase subunit 31.5e-4197.85Show/hide
Query:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD
        MN LRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFY FFFYSSKLILISVEITALALSYHLYNGVRHLLTD
Subjt:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD

A0A5C2FYC4 Succinate dehydrogenase subunit 31.5e-4197.85Show/hide
Query:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD
        MN LRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFY FFFYSSKLILISVEITALALSYHLYNGVRHLLTD
Subjt:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD

A0A7D6CA10 Succinate dehydrogenase subunit 33.0e-4298.92Show/hide
Query:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD
        MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFY FFFYSSKLILISVEITALALSYHLYNGVRHLLTD
Subjt:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD

SwissProt top hitse value%identityAlignment
P0DKI0 Succinate dehydrogenase subunit 3-1, mitochondrial1.3e-1343.75Show/hide
Query:  EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLT
        EP I +  RPLSPHL +Y+PQ+ S   I +RISG +L  +    YLL LKMG+IC TY +FY   +++ + + +   +TALA  YH       LLT
Subjt:  EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLT

P0DKI1 Succinate dehydrogenase subunit 3-2, mitochondrial1.3e-1343.75Show/hide
Query:  EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLT
        EP I +  RPLSPHL +Y+PQ+ S   I +RISG +L  +    YLL LKMG+IC TY +FY   +++ + + +   +TALA  YH       LLT
Subjt:  EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLT

P35721 Succinate dehydrogenase cytochrome b560 subunit9.2e-2059.79Show/hide
Query:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFF----FYSSKLILISVEITALALSYHLYNGVRHLLTD
        M I RPLSPHL IYKPQLTSTF I HRISGAFLAT+VL F +L  K+G +  T+ +FY +F    FY +  I+  V  T LAL YH+ NGVRHLL D
Subjt:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFF----FYSSKLILISVEITALALSYHLYNGVRHLLTD

P80481 Succinate dehydrogenase cytochrome b560 subunit1.1e-0942.72Show/hide
Query:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKM----------GLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHL
        MNI RP+SPHL IYK Q+T+T  I HRI+G  LA L L F++L LKM            I +T   + GF F +    L+      L + YHL+ G+RHL
Subjt:  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKM----------GLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHL

Query:  LTD
        + D
Subjt:  LTD

Q68XP1 Succinate dehydrogenase cytochrome b556 subunit1.8e-0741.76Show/hide
Query:  RPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITAL--ALSYHLYNGVRHLLTD
        RP SPHL IYKPQ++ST  I HR++G     + LFF +  L   LI   Y+N Y      ++  +I + + A   A  YHL NG+RHL  D
Subjt:  RPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITAL--ALSYHLYNGVRHLLTD

Arabidopsis top hitse value%identityAlignment
AT4G32210.1 succinate dehydrogenase 3-29.1e-1543.75Show/hide
Query:  EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLT
        EP I +  RPLSPHL +Y+PQ+ S   I +RISG +L  +    YLL LKMG+IC TY +FY   +++ + + +   +TALA  YH       LLT
Subjt:  EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLT

AT5G09600.1 succinate dehydrogenase 3-19.1e-1543.75Show/hide
Query:  EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLT
        EP I +  RPLSPHL +Y+PQ+ S   I +RISG +L  +    YLL LKMG+IC TY +FY   +++ + + +   +TALA  YH       LLT
Subjt:  EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLT

AT5G09600.2 succinate dehydrogenase 3-19.1e-1543.75Show/hide
Query:  EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLT
        EP I +  RPLSPHL +Y+PQ+ S   I +RISG +L  +    YLL LKMG+IC TY +FY   +++ + + +   +TALA  YH       LLT
Subjt:  EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLT

AT5G09600.3 succinate dehydrogenase 3-19.1e-1543.75Show/hide
Query:  EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLT
        EP I +  RPLSPHL +Y+PQ+ S   I +RISG +L  +    YLL LKMG+IC TY +FY   +++ + + +   +TALA  YH       LLT
Subjt:  EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAACCTAATATCATGAATATCCTTCGCCCGTTATCTCCTCATCTTCCTATTTATAAGCCACAGCTCACTTCGACGTTTCCAATTTCCCATAGAATCTCCGGGGCTTTCCT
AGCCACTCTCGTTTTGTTTTTTTATCTTCTTTGTCTGAAAATGGGTTTGATTTGCTTCACCTATGAGAATTTCTACGGATTCTTCTTTTATTCATCAAAGCTCATCCTAA
TCTCCGTCGAGATTACTGCCTTAGCCCTGTCCTATCATCTGTATAATGGGGTTCGTCATTTATTGACGGAT
mRNA sequenceShow/hide mRNA sequence
GAACCTAATATCATGAATATCCTTCGCCCGTTATCTCCTCATCTTCCTATTTATAAGCCACAGCTCACTTCGACGTTTCCAATTTCCCATAGAATCTCCGGGGCTTTCCT
AGCCACTCTCGTTTTGTTTTTTTATCTTCTTTGTCTGAAAATGGGTTTGATTTGCTTCACCTATGAGAATTTCTACGGATTCTTCTTTTATTCATCAAAGCTCATCCTAA
TCTCCGTCGAGATTACTGCCTTAGCCCTGTCCTATCATCTGTATAATGGGGTTCGTCATTTATTGACGGAT
Protein sequenceShow/hide protein sequence
EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLTD