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MS022803 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022803
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold29:21580..21780
RNA-Seq ExpressionMS022803
SyntenyMS022803
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF23949.1 conserved hypothetical protein [Ricinus communis]5.3e-2493.33Show/hide
Query:  MAGFLVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM
        MAGFLVQGKRVAIAPAVLASIYYGLGAVAQ+K GPGQCNAEFPVHYFYAWLD+YFPK YM
Subjt:  MAGFLVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM

EEF26390.1 conserved hypothetical protein, partial [Ricinus communis]5.3e-2493.33Show/hide
Query:  MAGFLVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM
        MAGFLVQGKRVAIAPAVLASIYYGLGAVAQ+K GPGQCNAEFPVHYFYAWLD+YFPK YM
Subjt:  MAGFLVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM

GFS28827.1 hypothetical protein Acr_00g0004140 [Actinidia rufa]9.1e-2493.33Show/hide
Query:  MAGFLVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM
        MAG LVQGKRVAIAPAVLASIYYGLGAVAQEK GPGQCNAEFPVHYFYAWLD+YFPK YM
Subjt:  MAGFLVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM

KAB1227959.1 hypothetical protein CJ030_MR1G013839 [Morella rubra]1.5e-1880.6Show/hide
Query:  IRPETFVMAGFLVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM
        IRPETFVMAGFLVQGKRVAIAPAVLASIYYGLGAVAQEK GPGQCNAEFP           FPK YM
Subjt:  IRPETFVMAGFLVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM

KAF7117298.1 hypothetical protein RHSIM_RhsimMtG0003800 [Rhododendron simsii]1.9e-2192.86Show/hide
Query:  LVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM
        LVQG+RVAIAPAVLASIYYGLGAVAQEK GPGQCNAEFPVHYFYAWLD+YFPK YM
Subjt:  LVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM

TrEMBL top hitse value%identityAlignment
A0A6A1WRP5 PMD domain-containing protein7.3e-1980.6Show/hide
Query:  IRPETFVMAGFLVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM
        IRPETFVMAGFLVQGKRVAIAPAVLASIYYGLGAVAQEK GPGQCNAEFP           FPK YM
Subjt:  IRPETFVMAGFLVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM

A0A6A1WTF8 Uncharacterized protein8.3e-1576.67Show/hide
Query:  MAGFLVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM
        MAGFLVQGKRVAIAPAVLASIYYGLGAVAQEK GPGQCNAEFP++     LD    K Y+
Subjt:  MAGFLVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM

A0A7J0D964 Uncharacterized protein4.4e-2493.33Show/hide
Query:  MAGFLVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM
        MAG LVQGKRVAIAPAVLASIYYGLGAVAQEK GPGQCNAEFPVHYFYAWLD+YFPK YM
Subjt:  MAGFLVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM

B9TCM5 Uncharacterized protein (Fragment)2.6e-2493.33Show/hide
Query:  MAGFLVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM
        MAGFLVQGKRVAIAPAVLASIYYGLGAVAQ+K GPGQCNAEFPVHYFYAWLD+YFPK YM
Subjt:  MAGFLVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM

B9TJL6 Uncharacterized protein2.6e-2493.33Show/hide
Query:  MAGFLVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM
        MAGFLVQGKRVAIAPAVLASIYYGLGAVAQ+K GPGQCNAEFPVHYFYAWLD+YFPK YM
Subjt:  MAGFLVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTCGCCCGGAAACATTTGTCATGGCCGGGTTCTTGGTGCAGGGAAAGAGAGTAGCCATAGCTCCGGCCGTCCTTGCCAGCATTTATTACGGTTTGGGCGCTGTTGCCCA
AGAGAAAGAGGGTCCAGGCCAGTGCAATGCGGAATTCCCGGTCCACTACTTCTATGCATGGCTAGACCGGTATTTTCCTAAGCAGTATATG
mRNA sequenceShow/hide mRNA sequence
ATTCGCCCGGAAACATTTGTCATGGCCGGGTTCTTGGTGCAGGGAAAGAGAGTAGCCATAGCTCCGGCCGTCCTTGCCAGCATTTATTACGGTTTGGGCGCTGTTGCCCA
AGAGAAAGAGGGTCCAGGCCAGTGCAATGCGGAATTCCCGGTCCACTACTTCTATGCATGGCTAGACCGGTATTTTCCTAAGCAGTATATG
Protein sequenceShow/hide protein sequence
IRPETFVMAGFLVQGKRVAIAPAVLASIYYGLGAVAQEKEGPGQCNAEFPVHYFYAWLDRYFPKQYM