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MS022804 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022804
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold29:23492..23734
RNA-Seq ExpressionMS022804
SyntenyMS022804
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2957479.1 Hypothetical predicted protein [Olea europaea subsp. europaea]1.3e-2191.04Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK
        MSKPPAEQITEVG ESAGDPEKAAEQSVEG QPTECV +SAGKEVEET QSQPNR RSQGAIPTAAK
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAK

CAN64513.1 hypothetical protein VITISV_004352 [Vitis vinifera]3.7e-2793.24Show/hide
Query:  GAGAPIMSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKG
        GA APIMSKPPAEQITEVGSESAGDPEKAAE SVEGTQPTECVP+SAGKEVEET QSQPNRLRS+GAIPTAAKG
Subjt:  GAGAPIMSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKG

KAA0042452.1 hypothetical protein E6C27_scaffold46442G00020 [Cucumis melo var. makuwa]1.5e-2093.44Show/hide
Query:  GAGAPIMSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNR
        GAGAPIMSKPPAEQITEVGSESAGDPEKAAEQSVEG QPTEC+PKSAGKEVEET +SQPNR
Subjt:  GAGAPIMSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNR

KAB1227959.1 hypothetical protein CJ030_MR1G013839 [Morella rubra]1.8e-2992.5Show/hide
Query:  AGAPIMSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKGSWSRVFF
        A APIMSKPPAEQITEVG ESAGDPEKAAEQSVEGTQPTECV +SAGKEVEET QSQPNR RSQGAIPTAAKGSWSRVFF
Subjt:  AGAPIMSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKGSWSRVFF

KAB1227962.1 hypothetical protein CJ030_MR1G013842 [Morella rubra]9.6e-2893.33Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKGSWSRVFF
        MSKPPAEQITEVG ESAGDPEKAAEQSVEGTQPTECV +SAGKEVEET QSQPNR RSQGAIPTAAKGSWSRVFF
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKGSWSRVFF

TrEMBL top hitse value%identityAlignment
A0A5A7TGB2 Uncharacterized protein7.2e-2193.44Show/hide
Query:  GAGAPIMSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNR
        GAGAPIMSKPPAEQITEVGSESAGDPEKAAEQSVEG QPTEC+PKSAGKEVEET +SQPNR
Subjt:  GAGAPIMSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNR

A0A6A1WRP5 PMD domain-containing protein8.5e-3092.5Show/hide
Query:  AGAPIMSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKGSWSRVFF
        A APIMSKPPAEQITEVG ESAGDPEKAAEQSVEGTQPTECV +SAGKEVEET QSQPNR RSQGAIPTAAKGSWSRVFF
Subjt:  AGAPIMSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKGSWSRVFF

A0A6A1WRS3 Uncharacterized protein4.7e-2893.33Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKGSWSRVFF
        MSKPPAEQITEVG ESAGDPEKAAEQSVEGTQPTECV +SAGKEVEET QSQPNR RSQGAIPTAAKGSWSRVFF
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKGSWSRVFF

A5AFS6 Uncharacterized protein1.8e-2793.24Show/hide
Query:  GAGAPIMSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKG
        GA APIMSKPPAEQITEVGSESAGDPEKAAE SVEGTQPTECVP+SAGKEVEET QSQPNRLRS+GAIPTAAKG
Subjt:  GAGAPIMSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKG

F6H890 Uncharacterized protein1.1e-2689.19Show/hide
Query:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKGSWSRVF
        MSKPPAEQITEVGSESAGDPEKAAE SVEGTQPTECVP+SAGKEVEE  QSQPNRLRS+GAIP AAKGSWSR +
Subjt:  MSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKGSWSRVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGGGCCGGGGCACCGATCATGTCAAAGCCTCCTGCCGAGCAAATTACTGAAGTTGGTTCTGAGTCGGCTGGTGATCCAGAAAAGGCTGCTGAACAGAGTGTCGAAGGAAC
ACAGCCTACCGAATGTGTTCCGAAGTCCGCGGGTAAAGAAGTTGAAGAGACGGTTCAGTCGCAGCCGAACCGACTGAGATCACAGGGAGCGATCCCCACAGCCGCTAAAG
GTAGCTGGAGCCGGGTTTTTTTC
mRNA sequenceShow/hide mRNA sequence
GGGGCCGGGGCACCGATCATGTCAAAGCCTCCTGCCGAGCAAATTACTGAAGTTGGTTCTGAGTCGGCTGGTGATCCAGAAAAGGCTGCTGAACAGAGTGTCGAAGGAAC
ACAGCCTACCGAATGTGTTCCGAAGTCCGCGGGTAAAGAAGTTGAAGAGACGGTTCAGTCGCAGCCGAACCGACTGAGATCACAGGGAGCGATCCCCACAGCCGCTAAAG
GTAGCTGGAGCCGGGTTTTTTTC
Protein sequenceShow/hide protein sequence
GAGAPIMSKPPAEQITEVGSESAGDPEKAAEQSVEGTQPTECVPKSAGKEVEETVQSQPNRLRSQGAIPTAAKGSWSRVFF