; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022806 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022806
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC116190061
Genome locationscaffold29:39089..39774
RNA-Seq ExpressionMS022806
SyntenyMS022806
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010646950.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100853704, partial [Vitis vinifera]3.9e-7389.22Show/hide
Query:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCGL-------RTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQ
        RSDPPDEKLNSALLLS RTYPPRDS NF GL        TKSPLTTNQQTSSG VLPGRSEQQGTPR RFSSWAAVSRSRGRSAPCP   VICSHK LLQ
Subjt:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCGL-------RTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQ

Query:  SDLAGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
        SDLAGERSQFAAENKT SERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
Subjt:  SDLAGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP

XP_015169044.1 PREDICTED: uncharacterized protein LOC107062662 [Solanum tuberosum]2.3e-7390.18Show/hide
Query:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCG----LRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL
        RSDPPD+KLNSALLLSRRTYPPRDS NF        TKSPLTTNQ+TSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRI  ICSHK LLQSDL
Subjt:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCG----LRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL

Query:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGS
        AGERSQFA ENKT SERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGS
Subjt:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGS

XP_015869270.1 uncharacterized protein LOC107406644 [Ziziphus jujuba]5.5e-7592.12Show/hide
Query:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCG----LRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL
        RSDPPDEKLNSALLLSRRTYPPRDS NF        TKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRI VICS KRLLQSDL
Subjt:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCG----LRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL

Query:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSA-PRLGGIYLIPITRRGSP
        AGERSQFAAENKT SERTFVRFFSTKHGSLRITVGRWLPKETPIRSA PRLGGIYLIPITRRGSP
Subjt:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSA-PRLGGIYLIPITRRGSP

XP_016437897.1 PREDICTED: uncharacterized protein LOC107763905 [Nicotiana tabacum]7.9e-7490.8Show/hide
Query:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCG----LRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL
        RSDPPD+KLNSALLLSRRTYPPRDS NF        TKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRI  ICSHK LLQSDL
Subjt:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCG----LRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL

Query:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGS
        AGERSQFA ENKT SERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGS
Subjt:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGS

XP_042491226.1 LOW QUALITY PROTEIN: uncharacterized protein LOC122071023 [Macadamia integrifolia]1.3e-7390.24Show/hide
Query:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCG----LRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL
        RSDPPDEKLNSALLLSRRTYPPRDS NF        TKSPLTTNQQTSSGWVLPGRSEQQGTPRRR  SWAAVSRSRGRSAPCPR  VICSH  LLQSDL
Subjt:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCG----LRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL

Query:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
        AGERSQFAAENKT SERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
Subjt:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP

TrEMBL top hitse value%identityAlignment
A0A1S3XDI4 uncharacterized protein LOC1077639053.8e-7490.8Show/hide
Query:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCG----LRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL
        RSDPPD+KLNSALLLSRRTYPPRDS NF        TKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRI  ICSHK LLQSDL
Subjt:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCG----LRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL

Query:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGS
        AGERSQFA ENKT SERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGS
Subjt:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGS

A0A6P3YYU3 uncharacterized protein LOC1074066442.6e-7592.12Show/hide
Query:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCG----LRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL
        RSDPPDEKLNSALLLSRRTYPPRDS NF        TKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRI VICS KRLLQSDL
Subjt:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCG----LRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL

Query:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSA-PRLGGIYLIPITRRGSP
        AGERSQFAAENKT SERTFVRFFSTKHGSLRITVGRWLPKETPIRSA PRLGGIYLIPITRRGSP
Subjt:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSA-PRLGGIYLIPITRRGSP

A0A6P4CAN7 uncharacterized protein LOC1074725721.9e-7389.76Show/hide
Query:  RSDPPDEKLNSALLLSRRTYPPRDSLNFC----GLRTKSPLTTNQQTSSGWVLP--GRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQS
        RSDPPDEKLNSALLLSRRTYPPRDS NF        T SPLTTNQQTSSGWVLP  GRSEQQGTPRRRFSSWAAVSRSRGRS PCPR RVICSHK LLQS
Subjt:  RSDPPDEKLNSALLLSRRTYPPRDSLNFC----GLRTKSPLTTNQQTSSGWVLP--GRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQS

Query:  DLAGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
        DLAGERSQFAAENKT SERTFVRFFSTKHGSLRITVGRWLPKETPIRSAP+LGGIYLIPITRRGSP
Subjt:  DLAGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP

A0A6P8BX57 LOW QUALITY PROTEIN: uncharacterized protein LOC1161900612.5e-7389.02Show/hide
Query:  RSDPPDEKLNSALLLSRRTYPPRDSLNFC----GLRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL
        RSDPP+EKL+SALLLSRRTYPPRDS NF        T SPLTTNQQTSSGWVLPGRSEQ+GTPRRRFSSWAAVSRSRGRSAPCPR  VICS K LLQSDL
Subjt:  RSDPPDEKLNSALLLSRRTYPPRDSLNFC----GLRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL

Query:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
        AGERSQFAAENKT SERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
Subjt:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP

F4IMB1 Uncharacterized protein3.6e-7288.41Show/hide
Query:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCG----LRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL
        +SDPPDEKLNSALLLSRRTYPPRDS NF        TKSPLTTNQQTSSGWVLPGRSEQ+GTPRRRF SWAAVSRSRGRSAPCPR  VICS K LLQSDL
Subjt:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCG----LRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL

Query:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
        AGERSQFAAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSAPR GGIYLIPITRRGSP
Subjt:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G07599.1 unknown protein6.9e-7688.41Show/hide
Query:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCG----LRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL
        +SDPPDEKLNSALLLSRRTYPPRDS NF        TKSPLTTNQQTSSGWVLPGRSEQ+GTPRRRF SWAAVSRSRGRSAPCPR  VICS K LLQSDL
Subjt:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCG----LRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL

Query:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
        AGERSQFAAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSAPR GGIYLIPITRRGSP
Subjt:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP

AT2G07599.2 unknown protein1.2e-7588.41Show/hide
Query:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCG----LRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL
        RS+PPDEKLNSALLLSRRTYPPRDS NF        TKSPLTTNQQTSSGWVLPGRSEQ+GTPRRRF SWAAVSRSRGRSAPCPR  VICS K LLQSDL
Subjt:  RSDPPDEKLNSALLLSRRTYPPRDSLNFCG----LRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDL

Query:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP
        AGERSQFAAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSAPR GGIYLIPITRRGSP
Subjt:  AGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGATCAGATCCACCAGACGAGAAACTCAATTCCGCACTGCTGCTGAGTCGTCGGACTTATCCACCAAGGGATTCCTTGAATTTCTGTGGATTGCGTACTAAGAGTCCTCT
CACTACCAACCAGCAGACATCATCTGGCTGGGTCTTGCCGGGGAGATCGGAGCAACAGGGAACGCCTAGACGACGTTTTTCTTCCTGGGCAGCTGTAAGTAGATCGAGAG
GTCGTTCCGCCCCTTGTCCCCGAATAAGGGTAATATGTTCTCATAAAAGGTTGCTCCAATCTGACCTAGCTGGCGAGCGATCCCAGTTCGCAGCAGAGAACAAGACAGGA
AGCGAGCGTACCTTTGTTCGCTTCTTCTCCACCAAGCACGGAAGTTTAAGGATAACTGTAGGTCGGTGGCTACCTAAGGAAACTCCGATTCGATCCGCCCCCCGGCTGGG
AGGCATCTACCTCATCCCGATCACAAGGAGAGGTTCACCA
mRNA sequenceShow/hide mRNA sequence
AGATCAGATCCACCAGACGAGAAACTCAATTCCGCACTGCTGCTGAGTCGTCGGACTTATCCACCAAGGGATTCCTTGAATTTCTGTGGATTGCGTACTAAGAGTCCTCT
CACTACCAACCAGCAGACATCATCTGGCTGGGTCTTGCCGGGGAGATCGGAGCAACAGGGAACGCCTAGACGACGTTTTTCTTCCTGGGCAGCTGTAAGTAGATCGAGAG
GTCGTTCCGCCCCTTGTCCCCGAATAAGGGTAATATGTTCTCATAAAAGGTTGCTCCAATCTGACCTAGCTGGCGAGCGATCCCAGTTCGCAGCAGAGAACAAGACAGGA
AGCGAGCGTACCTTTGTTCGCTTCTTCTCCACCAAGCACGGAAGTTTAAGGATAACTGTAGGTCGGTGGCTACCTAAGGAAACTCCGATTCGATCCGCCCCCCGGCTGGG
AGGCATCTACCTCATCCCGATCACAAGGAGAGGTTCACCA
Protein sequenceShow/hide protein sequence
RSDPPDEKLNSALLLSRRTYPPRDSLNFCGLRTKSPLTTNQQTSSGWVLPGRSEQQGTPRRRFSSWAAVSRSRGRSAPCPRIRVICSHKRLLQSDLAGERSQFAAENKTG
SERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGIYLIPITRRGSP