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MS022809 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022809
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNADH dehydrogenase subunit 9
Genome locationscaffold29:47402..47753
RNA-Seq ExpressionMS022809
SyntenyMS022809
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0009579 - thylakoid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domainsIPR037232 - NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGY62835.1 orf224 [Eruca vesicaria subsp. sativa]1.4e-4096.47Show/hide
Query:  FLFMDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
        F+FMDNQSIFKYSWETLPKKWVKK ERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVD+PSRKRRFEVVYNLLSTRY
Subjt:  FLFMDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY

CAA7039598.1 unnamed protein product [Microthlaspi erraticum]1.4e-4096.47Show/hide
Query:  FLFMDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
        F+FMDNQSIFKYSWETLPKKWVKK ERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVD+PSRKRRFEVVYNLLSTRY
Subjt:  FLFMDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY

QCD93686.1 NADH dehydrogenase [Vigna unguiculata]1.1e-4394.62Show/hide
Query:  QEAELQESFLFMDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
        +EAELQESFL+MDNQSIFKYSWETLPKKWV+K ERSEHGNRSDT TDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
Subjt:  QEAELQESFLFMDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY

YP_009675503.1 NADH dehydrogenase subunit 9 [Sophora flavescens]1.2e-4493.75Show/hide
Query:  FFEQEAELQESFLFMDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
        F EQEAELQE FL+MDNQ IFKYSWETLPKKWV K ERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
Subjt:  FFEQEAELQESFLFMDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY

YP_009913657.1 NADH dehydrogenase subunit 9 [Luffa acutangula]2.4e-40100Show/hide
Query:  MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
        MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
Subjt:  MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY

TrEMBL top hitse value%identityAlignment
A0A3P6H4S7 Complex1_30kDa domain-containing protein6.9e-4196.47Show/hide
Query:  FLFMDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
        F+FMDNQSIFKYSWETLPKKWVKK ERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVD+PSRKRRFEVVYNLLSTRY
Subjt:  FLFMDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY

A0A4D6M0E3 NADH dehydrogenase5.1e-4494.62Show/hide
Query:  QEAELQESFLFMDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
        +EAELQESFL+MDNQSIFKYSWETLPKKWV+K ERSEHGNRSDT TDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
Subjt:  QEAELQESFLFMDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY

A0A4Y5UZQ3 NADH dehydrogenase subunit 96.0e-4593.75Show/hide
Query:  FFEQEAELQESFLFMDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
        F EQEAELQE FL+MDNQ IFKYSWETLPKKWV K ERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
Subjt:  FFEQEAELQESFLFMDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY

A0A650GBH7 Complex1_30kDa domain-containing protein6.9e-4196.47Show/hide
Query:  FLFMDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
        F+FMDNQSIFKYSWETLPKKWVKK ERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVD+PSRKRRFEVVYNLLSTRY
Subjt:  FLFMDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY

A0A6D2JIB6 Complex1_30kDa domain-containing protein6.9e-4196.47Show/hide
Query:  FLFMDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
        F+FMDNQSIFKYSWETLPKKWVKK ERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVD+PSRKRRFEVVYNLLSTRY
Subjt:  FLFMDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY

SwissProt top hitse value%identityAlignment
P80261 NADH dehydrogenase [ubiquinone] iron-sulfur protein 34.7e-3991.46Show/hide
Query:  MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
        MDNQ IFKYSWETLPKKWVKK ERSEHGNR DTNTDYLFQLLCF+KLHTYTRVQV IDICGVDYPSRK+RFEVVYNLLS RY
Subjt:  MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY

Q33994 NADH dehydrogenase [ubiquinone] iron-sulfur protein 32.8e-3992.68Show/hide
Query:  MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
        MDNQ IFKYSWETLPKKWVKK E+SEHGNR DTNTDYLFQLLCFLKLHTYTR QV IDICGVDYPSRKRRFEVVYNLLSTRY
Subjt:  MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY

Q34011 NADH dehydrogenase [ubiquinone] iron-sulfur protein 32.8e-3992.68Show/hide
Query:  MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
        MDNQ IFKYSWETLPKKWVKK E+SEHGNR DTNTDYLFQLLCFLKLHTYTR QV IDICGVDYPSRKRRFEVVYNLLSTRY
Subjt:  MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY

Q37787 NADH dehydrogenase [ubiquinone] iron-sulfur protein 32.8e-3992.68Show/hide
Query:  MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
        MDNQ IFKYSWETLPKKWVKK E+SEHGNR DTNTDYLFQLLCFLKLHTYTR QV IDICGVDYPSRKRRFEVVYNLLSTRY
Subjt:  MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY

Q95748 NADH dehydrogenase [ubiquinone] iron-sulfur protein 31.9e-4095.12Show/hide
Query:  MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
        MDNQ IFKYSWETLPKKWVKK ERSEHGNR DTNTDYLFQLLCFLKLHTYTRVQV IDICGVDYPSRKRRFEVVYNLLSTRY
Subjt:  MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY

Arabidopsis top hitse value%identityAlignment
ATMG00070.1 NADH dehydrogenase subunit 92.1e-4296.34Show/hide
Query:  MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY
        MDNQ IFKYSWETLPKKWVKK ERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVD+PSRKRRFEVVYNLLSTRY
Subjt:  MDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYNLLSTRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCCCATGCCTTTCTTGGTTGGACCAACCCAACCGGCGATTTCCGACAAGTCTTTCTTCATTTTTCGAGCAAGAAGCGGAACTACAAGAAAGCTTTCTTTTTATGGATAA
CCAATCCATTTTCAAATATAGTTGGGAGACTCTCCCCAAGAAATGGGTCAAAAAAAGAGAAAGATCGGAACATGGGAATAGATCGGATACCAATACGGACTACCTATTTC
AATTGTTGTGCTTTCTTAAATTGCATACCTATACAAGGGTTCAAGTTTCGATCGATATTTGCGGAGTTGATTATCCCTCTCGAAAACGCAGATTTGAAGTGGTCTATAAT
TTACTGAGTACTCGGTAT
mRNA sequenceShow/hide mRNA sequence
CTCCCATGCCTTTCTTGGTTGGACCAACCCAACCGGCGATTTCCGACAAGTCTTTCTTCATTTTTCGAGCAAGAAGCGGAACTACAAGAAAGCTTTCTTTTTATGGATAA
CCAATCCATTTTCAAATATAGTTGGGAGACTCTCCCCAAGAAATGGGTCAAAAAAAGAGAAAGATCGGAACATGGGAATAGATCGGATACCAATACGGACTACCTATTTC
AATTGTTGTGCTTTCTTAAATTGCATACCTATACAAGGGTTCAAGTTTCGATCGATATTTGCGGAGTTGATTATCCCTCTCGAAAACGCAGATTTGAAGTGGTCTATAAT
TTACTGAGTACTCGGTAT
Protein sequenceShow/hide protein sequence
LPCLSWLDQPNRRFPTSLSSFFEQEAELQESFLFMDNQSIFKYSWETLPKKWVKKRERSEHGNRSDTNTDYLFQLLCFLKLHTYTRVQVSIDICGVDYPSRKRRFEVVYN
LLSTRY