CuGenDBv2

Gene ID	MS022815
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Cytochrome c biogenesis B
Genome location	scaffold29:71815..72111
RNA-Seq Expression	MS022815
Synteny	MS022815
Gene Ontology terms	GO:0015886 - heme transport (biological process) GO:0017004 - cytochrome complex assembly (biological process) GO:0005739 - mitochondrion (cellular component) GO:0043190 - ATP-binding cassette (ABC) transporter complex (cellular component) GO:0015232 - heme transporter activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

AEN56106.1 cytochrome c biogenesis B [Cucumis melo subsp. melo]

2.1e-45

96.97

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Query:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD
        PM KLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPT+SRTSIETEWFHVPSSIGYSSPFVSLFPISVS+SLQD
Subjt:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD

YP_004237257.1 cytochrome c biogenesis B [Ricinus communis]

1.2e-43

95.96

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Query:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD
        PML+LPYQFGRSGMD LNILLGSLVLTLLCGIHSRSALGITSS GWNSSQNPTTSPT LPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD
Subjt:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD

YP_004849329.1 cytochrome c biogenesis B [Cucumis sativus]

7.3e-46

97.98

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Query:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD
        PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPT+SRTSIETEWFHVPSSIGYSSPFVSLFPISVS+SLQD
Subjt:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD

YP_009676244.1 cytochrome c maturation protein CcmB [Camellia sinensis]

4.0e-44

96.97

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Query:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD
        PML+LPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSS GWNSSQNPTTSPTSLPPTVSRTSIETEWFHV SSIGYSSPFVSLFPISVSISLQD
Subjt:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD

YP_009913630.1 cytochrome c biogenesis B [Luffa acutangula]

1.9e-46

100

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Query:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD
        PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD
Subjt:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD

TrEMBL top hits

e value

%identity

Alignment

A0A3Q9CS08 Cytochrome c biogenesis B

1.0e-45

96.97

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Query:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD
        PM KLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPT+SRTSIETEWFHVPSSIGYSSPFVSLFPISVS+SLQD
Subjt:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD

A0A4Y5WZ36 Cytochrome c maturation protein CcmB

1.9e-44

96.97

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Query:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD
        PML+LPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSS GWNSSQNPTTSPTSLPPTVSRTSIETEWFHV SSIGYSSPFVSLFPISVSISLQD
Subjt:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD

A0A7D6C7C3 Cytochrome c biogenesis B

9.3e-47

100

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Query:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD
        PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD
Subjt:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD

G3EIY1 Cytochrome c biogenesis B

3.6e-46

97.98

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Query:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD
        PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPT+SRTSIETEWFHVPSSIGYSSPFVSLFPISVS+SLQD
Subjt:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD

G3EU22 Cytochrome c biogenesis B

1.0e-45

96.97

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Query:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD
        PM KLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPT+SRTSIETEWFHVPSSIGYSSPFVSLFPISVS+SLQD
Subjt:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD

SwissProt top hits

e value

%identity

Alignment

P38454 Putative cytochrome c biogenesis ccmB-like mitochondrial protein

1.4e-20

58.16

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Query:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQ
        P+L+L YQF +S M+   I++GS + TL+CGIHS  ALGITS+ GWNS QN TT PT LP  V  TSIETEWFHV   +GY   F+  +PI VSI+LQ
Subjt:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQ

P93280 Putative cytochrome c biogenesis ccmB-like mitochondrial protein

5.1e-34

81.82

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Query:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD
        PML+L YQFGRSGMD LNILLGSLVLTLLCGIHS  ALGITSS GWNSSQN TT PT LP TV  TSIETEWFHV   IGY   FVSLFPISVSISLQD
Subjt:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD

Arabidopsis top hits

e value

%identity

Alignment

ATMG00110.1 cytochrome C biogenesis 206

2.1e-43

91.92

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Query:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD
        PML+L YQFGRSGMDRLNI LGSLVLTLLCGIHSRSALGITSS GWNSSQNPTTSPT LP TVSRTSIETEWFHV SSIGYSS FVSLFPISVSISLQD
Subjt:  PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD

Sequences

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CDS sequence

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CCCATGTTAAAACTTCCGTACCAATTCGGTCGATCCGGAATGGATCGGTTAAACATTCTATTAGGGAGCCTGGTCTTGACTCTTCTGTGTGGTATTCATTCTCGTTCGGC
TCTTGGAATCACATCCAGCCGTGGTTGGAACAGCTCGCAAAATCCAACCACTTCACCTACTTCATTGCCCCCAACCGTTTCTCGTACCTCTATTGAAACAGAATGGTTTC
ATGTTCCTTCATCGATTGGTTATTCCTCCCCGTTCGTATCTCTTTTTCCAATTTCGGTCTCGATTAGTTTACAAGAT

mRNA sequence

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Protein sequence

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PMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD

MS022815 (gene) of Bitter gourd (TR) v1 genome