; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022826 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022826
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA polymerase
Genome locationscaffold29:119823..120053
RNA-Seq ExpressionMS022826
SyntenyMS022826
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0006351 - transcription, DNA-templated (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QCB20442.1 DNA-polymerase-like [Actinidia chinensis]4.9e-2173.68Show/hide
Query:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKI
        LK SR ELKPF+VAD ETILI+N HKPYAAGL++VRPGEQI D +I T FSED+SI + SFEERSTKVLYD V +I
Subjt:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKI

XP_016652446.1 PREDICTED: LOW QUALITY PROTEIN: DNA polymerase-like [Prunus mume]4.9e-2175Show/hide
Query:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKI
        LK  R ELKPFIVAD ET+LI+N HKPYAAGLL+VRPGEQI D LI + FSED+SI + SFEERSTKVLYDLV +I
Subjt:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKI

XP_020594096.1 LOW QUALITY PROTEIN: uncharacterized protein LOC110034150 [Phalaenopsis equestris]3.4e-2272.73Show/hide
Query:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKIV
        LK SR ELKPF+VAD ETILI+NEHKPYA GLLLVRPG++I +RLI T FSEDHSI + SFEERSTKVL+D + +I+
Subjt:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKIV

XP_020594098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC110034151 [Phalaenopsis equestris]3.4e-2272.73Show/hide
Query:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKIV
        LK SR ELKPF+VAD ETILI+NEHKPYA GLLLVRPG++I +RLI T FSEDHSI + SFEERSTKVL+D + +I+
Subjt:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKIV

XP_020693779.2 uncharacterized protein LOC110107749 [Dendrobium catenatum]2.9e-2170.13Show/hide
Query:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKIV
        LK SR ELKPF+VAD ETILI+NEHKPYA GLLLVRPG++I ++LI T FSEDHS+ + SFEERSTKVL+D + +I+
Subjt:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKIV

TrEMBL top hitse value%identityAlignment
A0A117NIU6 DNA-directed DNA polymerase2.4e-2175Show/hide
Query:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKI
        LK  R ELKPFIVAD ET+LI+N HKPYAAGLL+VRPGEQI D LI + FSED+SI + SFEERSTKVLYDLV +I
Subjt:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKI

A0A6J5TJE9 DNA-directed DNA polymerase2.4e-2175Show/hide
Query:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKI
        LK  R ELKPFIVAD ET+LI+N HKPYAAGLL+VRPGEQI D LI + FSED+SI + SFEERSTKVLYDLV +I
Subjt:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKI

A0A6J5TK64 DNA polymerase2.4e-2175Show/hide
Query:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKI
        LK  R ELKPFIVAD ET+LI+N HKPYAAGLL+VRPGEQI D LI + FSED+SI + SFEERSTKVLYDLV +I
Subjt:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKI

A0A6J5VPQ6 Multifunctional fusion protein2.4e-2175Show/hide
Query:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKI
        LK  R ELKPFIVAD ET+LI+N HKPYAAGLL+VRPGEQI D LI + FSED+SI + SFEERSTKVLYDLV +I
Subjt:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKI

A0A6J5W251 DNA polymerase2.4e-2175Show/hide
Query:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKI
        LK  R ELKPFIVAD ET+LI+N HKPYAAGLL+VRPGEQI D LI + FSED+SI + SFEERSTKVLYDLV +I
Subjt:  LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCAAAGCATCTCGTAAGGAGCTGAAACCTTTCATTGTAGCGGATATCGAGACAATACTGATAAATAATGAACATAAGCCTTATGCTGCGGGTCTCTTGTTGGTTCGTCC
TGGTGAACAGATCACAGATCGTCTGATCTATACTAATTTCAGCGAGGACCACTCAATCAAAATTTCTTCCTTTGAAGAAAGGAGTACTAAGGTCCTTTATGACTTGGTGT
CAAAGATCGTA
mRNA sequenceShow/hide mRNA sequence
CTCAAAGCATCTCGTAAGGAGCTGAAACCTTTCATTGTAGCGGATATCGAGACAATACTGATAAATAATGAACATAAGCCTTATGCTGCGGGTCTCTTGTTGGTTCGTCC
TGGTGAACAGATCACAGATCGTCTGATCTATACTAATTTCAGCGAGGACCACTCAATCAAAATTTCTTCCTTTGAAGAAAGGAGTACTAAGGTCCTTTATGACTTGGTGT
CAAAGATCGTA
Protein sequenceShow/hide protein sequence
LKASRKELKPFIVADIETILINNEHKPYAAGLLLVRPGEQITDRLIYTNFSEDHSIKISSFEERSTKVLYDLVSKIV