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MS022836 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022836
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytochrome c oxidase subunit 1
Genome locationscaffold29:152393..152583
RNA-Seq ExpressionMS022836
SyntenyMS022836
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB58280.1 hypothetical protein L484_015614 [Morus notabilis]9.4e-0780.56Show/hide
Query:  SPEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEPPH
        SPEF  TIPVS  MVNKKM+P ANNMGVLYC EPPH
Subjt:  SPEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEPPH

GFC35842.1 hypothetical protein [Tanacetum cinerariifolium]5.9e-1777.42Show/hide
Query:  MSSPEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEPP---HMVAIQDFDSSGDCYDHGSSGE
        MSSPEFA TIPVSPPMVNK MDPTANNMGVLYCI+PP        +DFDSSGD YDHGS GE
Subjt:  MSSPEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEPP---HMVAIQDFDSSGDCYDHGSSGE

KAF1856899.1 hypothetical protein Lal_00001930 [Lupinus albus]1.9e-1597.67Show/hide
Query:  MSSPEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEPPHMVAIQ
        MSSPEFAGTIPVSPPMVNKKM+PTANNMGVLYCIEPPHMVAIQ
Subjt:  MSSPEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEPPHMVAIQ

KAF3635473.1 ATP synthase subunit alpha, chloroplastic [Capsicum annuum]1.8e-1881.25Show/hide
Query:  MSSPEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEP-PH-MVAIQDFDSSGDCYDHGSSGEVGT
        MSSPEFA TIPVSPPMVNKKM+PT NNMGVLYCIEP PH     +DFDSSGD YDHGS GEVGT
Subjt:  MSSPEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEP-PH-MVAIQDFDSSGDCYDHGSSGEVGT

KAF5767741.1 hypothetical protein HanXRQr2_Chr14g0628261 [Helianthus annuus]5.0e-16100Show/hide
Query:  MSSPEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEPPHMVAIQ
        MSSPEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEPPHMVAIQ
Subjt:  MSSPEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEPPHMVAIQ

TrEMBL top hitse value%identityAlignment
A0A1J5PCK5 Uncharacterized protein1.2e-0460.98Show/hide
Query:  PEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEPPHMVAIQD
        P  A T PV+PPMVN   +P A ++GVL  IEPPHMVAIQ+
Subjt:  PEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEPPHMVAIQD

A0A6A5L812 Uncharacterized protein9.1e-1697.67Show/hide
Query:  MSSPEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEPPHMVAIQ
        MSSPEFAGTIPVSPPMVNKKM+PTANNMGVLYCIEPPHMVAIQ
Subjt:  MSSPEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEPPHMVAIQ

J3M0A0 Uncharacterized protein7.7e-0796.43Show/hide
Query:  MVNKKMDPTANNMGVLYCIEPPHMVAIQ
        MVNKKM+PTANNMGVLYCIEPPHMVAIQ
Subjt:  MVNKKMDPTANNMGVLYCIEPPHMVAIQ

M8AUQ9 Uncharacterized protein7.7e-1595.35Show/hide
Query:  MSSPEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEPPHMVAIQ
        MSSPEFA TIPVSPPMVNKKM+PTANNMGVLYCIEPPHMVAIQ
Subjt:  MSSPEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEPPHMVAIQ

W9QY14 Uncharacterized protein4.5e-0780.56Show/hide
Query:  SPEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEPPH
        SPEF  TIPVS  MVNKKM+P ANNMGVLYC EPPH
Subjt:  SPEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEPPH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAGCCCTGAATTTGCCGGGACTATTCCAGTGAGTCCTCCTATGGTGAACAAAAAGATGGACCCTACAGCAAATAACATGGGTGTTTTGTATTGTATCGAACCCCC
CCACATGGTAGCGATCCAAGATTTTGATTCCAGTGGGGACTGCTATGATCATGGTAGCAGCGGTGAAGTAGGCACG
mRNA sequenceShow/hide mRNA sequence
ATGTCTAGCCCTGAATTTGCCGGGACTATTCCAGTGAGTCCTCCTATGGTGAACAAAAAGATGGACCCTACAGCAAATAACATGGGTGTTTTGTATTGTATCGAACCCCC
CCACATGGTAGCGATCCAAGATTTTGATTCCAGTGGGGACTGCTATGATCATGGTAGCAGCGGTGAAGTAGGCACG
Protein sequenceShow/hide protein sequence
MSSPEFAGTIPVSPPMVNKKMDPTANNMGVLYCIEPPHMVAIQDFDSSGDCYDHGSSGEVGT