CuGenDBv2

Gene ID	MS022837
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Cytochrome c oxidase subunit 1
Genome location	scaffold29:152501..152842
RNA-Seq Expression	MS022837
Synteny	MS022837
Gene Ontology terms	GO:0006119 - oxidative phosphorylation (biological process) GO:0022900 - electron transport chain (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045277 - respiratory chain complex IV (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function) GO:0020037 - heme binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000883 - Cytochrome c oxidase subunit I IPR023616 - Cytochrome c oxidase-like, subunit I domain IPR036927 - Cytochrome c oxidase-like, subunit I superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

ABY66627.1 cytochrome oxidase subunit I, partial [Echinocystis lobata]

2.3e-59

98.25

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Query:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP
        MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYW GKIFGRTYPETLGQIHFWITFFGVNP LFPMHFLGLSGMP
Subjt:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP

Query:  RRIPDYPDAYAGWN
        RRIPDYPDAYAGWN
Subjt:  RRIPDYPDAYAGWN

ABY83868.1 cytochrome oxidase subunit 1, partial [Citrullus lanatus subsp. vulgaris]

2.3e-59

98.25

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Query:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP
        MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYW GKIFGRTYPETLGQIHFWITFFGVNP LFPMHFLGLSGMP
Subjt:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP

Query:  RRIPDYPDAYAGWN
        RRIPDYPDAYAGWN
Subjt:  RRIPDYPDAYAGWN

ABY83874.1 cytochrome oxidase subunit 1, partial [Neoachmandra indica]

2.3e-59

98.25

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Query:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP
        MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYW GKIFGRTYPETLGQIHFWITFFGVNP LFPMHFLGLSGMP
Subjt:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP

Query:  RRIPDYPDAYAGWN
        RRIPDYPDAYAGWN
Subjt:  RRIPDYPDAYAGWN

ABY83917.1 cytochrome oxidase subunit 1, partial [Luffa acutangula]

2.3e-59

98.25

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Query:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP
        MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYW GKIFGRTYPETLGQIHFWITFFGVNP LFPMHFLGLSGMP
Subjt:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP

Query:  RRIPDYPDAYAGWN
        RRIPDYPDAYAGWN
Subjt:  RRIPDYPDAYAGWN

YP_009913642.1 cytochrome c oxidase subunit 1 [Luffa acutangula]

2.3e-59

98.25

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Query:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP
        MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYW GKIFGRTYPETLGQIHFWITFFGVNP LFPMHFLGLSGMP
Subjt:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP

Query:  RRIPDYPDAYAGWN
        RRIPDYPDAYAGWN
Subjt:  RRIPDYPDAYAGWN

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UCF6 Cytochrome c oxidase subunit 1

1.1e-59

98.25

Show/hide

Query:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP
        MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYW GKIFGRTYPETLGQIHFWITFFGVNP LFPMHFLGLSGMP
Subjt:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP

Query:  RRIPDYPDAYAGWN
        RRIPDYPDAYAGWN
Subjt:  RRIPDYPDAYAGWN

A0A7D6J6S5 Cytochrome c oxidase subunit 1

1.1e-59

98.25

Show/hide

Query:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP
        MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYW GKIFGRTYPETLGQIHFWITFFGVNP LFPMHFLGLSGMP
Subjt:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP

Query:  RRIPDYPDAYAGWN
        RRIPDYPDAYAGWN
Subjt:  RRIPDYPDAYAGWN

B0FA80 Cytochrome c oxidase subunit 1 (Fragment)

1.1e-59

98.25

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Query:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP
        MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYW GKIFGRTYPETLGQIHFWITFFGVNP LFPMHFLGLSGMP
Subjt:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP

Query:  RRIPDYPDAYAGWN
        RRIPDYPDAYAGWN
Subjt:  RRIPDYPDAYAGWN

B4XVS1 Cytochrome c oxidase subunit 1 (Fragment)

1.1e-59

98.25

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Query:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP
        MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYW GKIFGRTYPETLGQIHFWITFFGVNP LFPMHFLGLSGMP
Subjt:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP

Query:  RRIPDYPDAYAGWN
        RRIPDYPDAYAGWN
Subjt:  RRIPDYPDAYAGWN

G3EU24 Cytochrome c oxidase subunit 1

1.1e-59

98.25

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Query:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP
        MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYW GKIFGRTYPETLGQIHFWITFFGVNP LFPMHFLGLSGMP
Subjt:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP

Query:  RRIPDYPDAYAGWN
        RRIPDYPDAYAGWN
Subjt:  RRIPDYPDAYAGWN

SwissProt top hits

e value

%identity

Alignment

P07506 Cytochrome c oxidase subunit 1

3.1e-59

95.61

Show/hide

Query:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP
        MLFAVG IFLFTIGGLTGIV ANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYW GKIFGRTYPETLGQIHFWITFFGVN  LFPMHFLGLSGMP
Subjt:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP

Query:  RRIPDYPDAYAGWN
        RRIPDYPDAYAGWN
Subjt:  RRIPDYPDAYAGWN

P08742 Cytochrome c oxidase subunit 1

4.5e-58

93.86

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Query:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP
        MLFAVG IFLFTIGGLTGIV ANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGF+YW GKIFGRTYPETLGQIHFWITFFGVN   FPMHFLGLSGMP
Subjt:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP

Query:  RRIPDYPDAYAGWN
        RRIPDYPDAYAGWN
Subjt:  RRIPDYPDAYAGWN

P12786 Cytochrome c oxidase subunit 1

6.3e-60

95.61

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Query:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP
        MLFAVG IFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYW GKIFGRTYPETLG+IHFWITFFGVN  LFPMHFLGLSGMP
Subjt:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP

Query:  RRIPDYPDAYAGWN
        RRIPDYPDAYAGWN
Subjt:  RRIPDYPDAYAGWN

P60620 Cytochrome c oxidase subunit 1

4.5e-58

93.86

Show/hide

Query:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP
        MLFAVG IFLFTIGGLTGIV ANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGF+YW GKIFGRTYPETLGQIHFWITFFGVN   FPMHFLGLSGMP
Subjt:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP

Query:  RRIPDYPDAYAGWN
        RRIPDYPDAYAGWN
Subjt:  RRIPDYPDAYAGWN

P68540 Cytochrome c oxidase subunit 1

4.5e-58

93.86

Show/hide

Query:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP
        MLFAVG IFLFTIGGLTGIV ANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGF+YW GKIFGRTYPETLGQIHFWITFFGVN   FPMHFLGLSGMP
Subjt:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP

Query:  RRIPDYPDAYAGWN
        RRIPDYPDAYAGWN
Subjt:  RRIPDYPDAYAGWN

Arabidopsis top hits

e value

%identity

Alignment

ATMG01360.1 cytochrome oxidase

3.2e-59

93.86

Show/hide

Query:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP
        MLFAVG IFLFTIGGLTGIV ANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGF+YW GKIFGRTYPETLGQIHFWITFFGVN   FPMHFLGLSGMP
Subjt:  MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMP

Query:  RRIPDYPDAYAGWN
        RRIPDYPDAYAGWN
Subjt:  RRIPDYPDAYAGWN

Sequences

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CDS sequence

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ATGTTATTTGCTGTAGGGTCCATCTTTTTGTTCACCATAGGAGGACTCACTGGAATAGTCCCGGCAAATTCAGGGCTAGACATTGCTCTACATGATACTTATTATGTGGT
TGCACATTTCCATTATGTACTTTCTATGGGAGCCGTTTTTGCTTTATTTGCAGGATTTCACTATTGGGCGGGTAAAATCTTTGGTCGGACATACCCTGAAACTTTAGGTC
AAATCCATTTTTGGATCACTTTTTTCGGGGTTAATCCGCCCCTCTTTCCCATGCATTTCTTAGGGCTTTCGGGTATGCCACGTCGCATTCCTGATTATCCAGATGCTTAC
GCTGGATGGAAT

mRNA sequence

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Protein sequence

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MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWAGKIFGRTYPETLGQIHFWITFFGVNPPLFPMHFLGLSGMPRRIPDYPDAY
AGWN

MS022837 (gene) of Bitter gourd (TR) v1 genome