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MS022844 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022844
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein TIC 214
Genome locationscaffold29:172325..172486
RNA-Seq ExpressionMS022844
SyntenyMS022844
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV84984.1 hypothetical protein CFOL_v3_28424 [Cephalotus follicularis]4.8e-0769.39Show/hide
Query:  GVRIPPRPQPAKKGRTFPSGGRKIMIGIADPKLWNLGVGLLSKWNGLIF
        GVRI P PQPAKKG   P GGRKI+  I    LWNLGVGLLSKWNG+ F
Subjt:  GVRIPPRPQPAKKGRTFPSGGRKIMIGIADPKLWNLGVGLLSKWNGLIF
THG14067.1 hypothetical protein TEA_017317 [Camellia sinensis var. sinensis]6.4e-1284.78Show/hide
Query:  RTTVSGVRIPPRPQPAKKGRTFPSGGRKIMIGIADPKLWNLGVGLL
        RTTVSGVRIPPRPQPA+KGRTFPSGG+KIMIGIAD KL NLG   L
Subjt:  RTTVSGVRIPPRPQPAKKGRTFPSGGRKIMIGIADPKLWNLGVGLL
VVW84856.1 unnamed protein product, partial [Nymphaea colorata]1.4e-0673.33Show/hide
Query:  RPQPAKKGRTFP----SGGRKIMIGIADPKLWNLGVGLLSKWNGL
        RPQ   +GR  P    SGGRKIMIGIAD KLWN GVGLLSKWNGL
Subjt:  RPQPAKKGRTFP----SGGRKIMIGIADPKLWNLGVGLLSKWNGL
VVW88655.1 unnamed protein product, partial [Nymphaea colorata]6.9e-0693.1Show/hide
Query:  SGGRKIMIGIADPKLWNLGVGLLSKWNGL
        SGGRKIMIGIAD KLWN GVGLLSKWNGL
Subjt:  SGGRKIMIGIADPKLWNLGVGLLSKWNGL
VVW89832.1 unnamed protein product, partial [Nymphaea colorata]1.4e-0673.33Show/hide
Query:  RPQPAKKGRTFP----SGGRKIMIGIADPKLWNLGVGLLSKWNGL
        RPQ   +GR  P    SGGRKIMIGIAD KLWN GVGLLSKWNGL
Subjt:  RPQPAKKGRTFP----SGGRKIMIGIADPKLWNLGVGLLSKWNGL
TrEMBL top hitse value%identityAlignment
A0A1Q3CXN5 Uncharacterized protein2.3e-0769.39Show/hide
Query:  GVRIPPRPQPAKKGRTFPSGGRKIMIGIADPKLWNLGVGLLSKWNGLIF
        GVRI P PQPAKKG   P GGRKI+  I    LWNLGVGLLSKWNG+ F
Subjt:  GVRIPPRPQPAKKGRTFPSGGRKIMIGIADPKLWNLGVGLLSKWNGLIF
A0A4V3WNW4 Protein TIC 2143.1e-1284.78Show/hide
Query:  RTTVSGVRIPPRPQPAKKGRTFPSGGRKIMIGIADPKLWNLGVGLL
        RTTVSGVRIPPRPQPA+KGRTFPSGG+KIMIGIAD KL NLG   L
Subjt:  RTTVSGVRIPPRPQPAKKGRTFPSGGRKIMIGIADPKLWNLGVGLL
A0A5K1HAV1 Uncharacterized protein (Fragment)6.7e-0773.33Show/hide
Query:  RPQPAKKGRTFP----SGGRKIMIGIADPKLWNLGVGLLSKWNGL
        RPQ   +GR  P    SGGRKIMIGIAD KLWN GVGLLSKWNGL
Subjt:  RPQPAKKGRTFP----SGGRKIMIGIADPKLWNLGVGLLSKWNGL
A0A5K1HQI3 Uncharacterized protein (Fragment)6.7e-0773.33Show/hide
Query:  RPQPAKKGRTFP----SGGRKIMIGIADPKLWNLGVGLLSKWNGL
        RPQ   +GR  P    SGGRKIMIGIAD KLWN GVGLLSKWNGL
Subjt:  RPQPAKKGRTFP----SGGRKIMIGIADPKLWNLGVGLLSKWNGL
A0A5K1HT79 Uncharacterized protein (Fragment)3.3e-0693.1Show/hide
Query:  SGGRKIMIGIADPKLWNLGVGLLSKWNGL
        SGGRKIMIGIAD KLWN GVGLLSKWNGL
Subjt:  SGGRKIMIGIADPKLWNLGVGLLSKWNGL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGAACCACGGTGTCGGGGGTTCGAATCCCTCCTCGCCCACAACCGGCCAAAAAGGGAAGGACTTTTCCCTCTGGGGGTAGGAAAATCATGATCGGGATAGCGGACCCAAA
GCTATGGAACTTGGGTGTGGGTCTTTTGTCGAAATGGAATGGCCTTATCTTT
mRNA sequenceShow/hide mRNA sequence
CGAACCACGGTGTCGGGGGTTCGAATCCCTCCTCGCCCACAACCGGCCAAAAAGGGAAGGACTTTTCCCTCTGGGGGTAGGAAAATCATGATCGGGATAGCGGACCCAAA
GCTATGGAACTTGGGTGTGGGTCTTTTGTCGAAATGGAATGGCCTTATCTTT
Protein sequenceShow/hide protein sequence
RTTVSGVRIPPRPQPAKKGRTFPSGGRKIMIGIADPKLWNLGVGLLSKWNGLIF