; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022845 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022845
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 5, chloroplastic
Genome locationscaffold29:175573..175929
RNA-Seq ExpressionMS022845
SyntenyMS022845
Gene Ontology termsGO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsIPR001750 - NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALO21756.1 NdhF [Cucurbita argyrosperma]1.2e-5596.64Show/hide
Query:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF
        IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALF+ +THAYSKALLFLGSGSIIHSMESVVGYSPDKS+NMVLMGGLTKHVPITKNAF
Subjt:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF

Query:  LLGTLSLCGIPPLACFWSK
        LLGTLSLCGIPPLACFWSK
Subjt:  LLGTLSLCGIPPLACFWSK

ALO22793.1 NdhF [Cucurbita pepo subsp. pepo]1.2e-5596.64Show/hide
Query:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF
        IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALF+ +THAYSKALLFLGSGSIIHSMESVVGYSPDKS+NMVLMGGLTKHVPITKNAF
Subjt:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF

Query:  LLGTLSLCGIPPLACFWSK
        LLGTLSLCGIPPLACFWSK
Subjt:  LLGTLSLCGIPPLACFWSK

QWV60888.1 NADH-plastoquinone oxidoreductase subunit 5 [Cucurbita ficifolia]1.2e-5596.64Show/hide
Query:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF
        IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALF+ +THAYSKALLFLGSGSIIHSMESVVGYSPDKS+NMVLMGGLTKHVPITKNAF
Subjt:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF

Query:  LLGTLSLCGIPPLACFWSK
        LLGTLSLCGIPPLACFWSK
Subjt:  LLGTLSLCGIPPLACFWSK

YP_009447583.1 NADH dehydrogenase subunit 5 [Cucurbita moschata]1.2e-5596.64Show/hide
Query:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF
        IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALF+ +THAYSKALLFLGSGSIIHSMESVVGYSPDKS+NMVLMGGLTKHVPITKNAF
Subjt:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF

Query:  LLGTLSLCGIPPLACFWSK
        LLGTLSLCGIPPLACFWSK
Subjt:  LLGTLSLCGIPPLACFWSK

YP_009505127.1 NADH dehydrogenase subunit 5 [Cucurbita pepo]1.2e-5596.64Show/hide
Query:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF
        IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALF+ +THAYSKALLFLGSGSIIHSMESVVGYSPDKS+NMVLMGGLTKHVPITKNAF
Subjt:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF

Query:  LLGTLSLCGIPPLACFWSK
        LLGTLSLCGIPPLACFWSK
Subjt:  LLGTLSLCGIPPLACFWSK

TrEMBL top hitse value%identityAlignment
A0A0S2IE76 NAD(P)H dehydrogenase subunit 55.9e-5696.64Show/hide
Query:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF
        IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALF+ +THAYSKALLFLGSGSIIHSMESVVGYSPDKS+NMVLMGGLTKHVPITKNAF
Subjt:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF

Query:  LLGTLSLCGIPPLACFWSK
        LLGTLSLCGIPPLACFWSK
Subjt:  LLGTLSLCGIPPLACFWSK

A0A0S2IGT3 NAD(P)H dehydrogenase subunit 55.9e-5696.64Show/hide
Query:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF
        IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALF+ +THAYSKALLFLGSGSIIHSMESVVGYSPDKS+NMVLMGGLTKHVPITKNAF
Subjt:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF

Query:  LLGTLSLCGIPPLACFWSK
        LLGTLSLCGIPPLACFWSK
Subjt:  LLGTLSLCGIPPLACFWSK

A0A2H4T227 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic5.9e-5696.64Show/hide
Query:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF
        IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALF+ +THAYSKALLFLGSGSIIHSMESVVGYSPDKS+NMVLMGGLTKHVPITKNAF
Subjt:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF

Query:  LLGTLSLCGIPPLACFWSK
        LLGTLSLCGIPPLACFWSK
Subjt:  LLGTLSLCGIPPLACFWSK

A0A6H0ERV9 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic5.9e-5696.64Show/hide
Query:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF
        IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALF+ +THAYSKALLFLGSGSIIHSMESVVGYSPDKS+NMVLMGGLTKHVPITKNAF
Subjt:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF

Query:  LLGTLSLCGIPPLACFWSK
        LLGTLSLCGIPPLACFWSK
Subjt:  LLGTLSLCGIPPLACFWSK

A0A7D4XNN8 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic5.9e-5696.64Show/hide
Query:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF
        IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALF+ +THAYSKALLFLGSGSIIHSMESVVGYSPDKS+NMVLMGGLTKHVPITKNAF
Subjt:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF

Query:  LLGTLSLCGIPPLACFWSK
        LLGTLSLCGIPPLACFWSK
Subjt:  LLGTLSLCGIPPLACFWSK

SwissProt top hitse value%identityAlignment
B0Z4S2 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.3e-5591.6Show/hide
Query:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF
        IITVL GATLALAQKDIKRSLAYSTMSQLGYMMLALG+GSYRAALF+ +THAYSKALLFLGSGSIIHSMES+VGYSPDKS+NMVLMGGL KHVPITK AF
Subjt:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF

Query:  LLGTLSLCGIPPLACFWSK
        L+GTLSLCGIPPLACFWSK
Subjt:  LLGTLSLCGIPPLACFWSK

B0Z506 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.3e-5591.6Show/hide
Query:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF
        IITVL GATLALAQKDIKRSLAYSTMSQLGYMMLALG+GSYRAALF+ +THAYSKALLFLGSGSIIHSMES+VGYSPDKS+NMVLMGGL KHVPITK AF
Subjt:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF

Query:  LLGTLSLCGIPPLACFWSK
        L+GTLSLCGIPPLACFWSK
Subjt:  LLGTLSLCGIPPLACFWSK

B0Z590 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.3e-5591.6Show/hide
Query:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF
        IITVL GATLALAQKDIKRSLAYSTMSQLGYMMLALG+GSYRAALF+ +THAYSKALLFLGSGSIIHSMES+VGYSPDKS+NMVLMGGL KHVPITK AF
Subjt:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF

Query:  LLGTLSLCGIPPLACFWSK
        L+GTLSLCGIPPLACFWSK
Subjt:  LLGTLSLCGIPPLACFWSK

Q2QD43 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.4e-5794.12Show/hide
Query:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF
        IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALG+GSY+AALF+ +THAYSKALLFLGSGSIIHSMESVVGYSPDKS+NMVLMGGLTKHVPITKNAF
Subjt:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF

Query:  LLGTLSLCGIPPLACFWSK
        LLGTLSLCG+PPLACFWSK
Subjt:  LLGTLSLCGIPPLACFWSK

Q9MTI4 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.3e-5591.6Show/hide
Query:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF
        IITVL GATLALAQKDIKRSLAYSTMSQLGYMMLALG+GSYRAALF+ +THAYSKALLFLGSGSIIHSMES+VGYSPDKS+NMVLMGGL KHVPITK AF
Subjt:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF

Query:  LLGTLSLCGIPPLACFWSK
        L+GTLSLCGIPPLACFWSK
Subjt:  LLGTLSLCGIPPLACFWSK

Arabidopsis top hitse value%identityAlignment
ATCG00890.1 NADH-Ubiquinone/plastoquinone (complex I) protein6.6e-0729.41Show/hide
Query:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF
        I++++FG  +A+ Q  +KR LAYS++ Q+GY+++ + +G       + +T+      + LG+ + I       G     + N+    GL    P    + 
Subjt:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF

Query:  LLGTLSLCGIPPLACFWSK
         L  LSL G+PPLA F+ K
Subjt:  LLGTLSLCGIPPLACFWSK

ATCG01010.1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein2.6e-5689.08Show/hide
Query:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF
        IITVL GATLALAQKDIKR LAYSTMSQLGYMMLALG+GSYR+ALF+ +THAYSKALLFLGSGSIIHSME++VGYSPDKS+NM+LMGGLTKHVPITK AF
Subjt:  IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAF

Query:  LLGTLSLCGIPPLACFWSK
        L+GTLSLCGIPPLACFWSK
Subjt:  LLGTLSLCGIPPLACFWSK

ATMG00060.1 NADH dehydrogenase subunit 5C4.7e-2145.3Show/hide
Query:  TVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAFLL
        T    AT  + Q D+KR +AYST SQLGYM+ A GI +Y  ++F+ + HA+ KALLFL +GS+IH+M           ++M  MGGL    P+T    L+
Subjt:  TVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAFLL

Query:  GTLSLCGIPPLACFWSK
        G+LSL G P L  F+SK
Subjt:  GTLSLCGIPPLACFWSK

ATMG00513.1 NADH dehydrogenase 5A4.7e-2145.3Show/hide
Query:  TVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAFLL
        T    AT  + Q D+KR +AYST SQLGYM+ A GI +Y  ++F+ + HA+ KALLFL +GS+IH+M           ++M  MGGL    P+T    L+
Subjt:  TVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAFLL

Query:  GTLSLCGIPPLACFWSK
        G+LSL G P L  F+SK
Subjt:  GTLSLCGIPPLACFWSK

ATMG00665.1 NADH dehydrogenase 5B4.7e-2145.3Show/hide
Query:  TVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAFLL
        T    AT  + Q D+KR +AYST SQLGYM+ A GI +Y  ++F+ + HA+ KALLFL +GS+IH+M           ++M  MGGL    P+T    L+
Subjt:  TVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAFLL

Query:  GTLSLCGIPPLACFWSK
        G+LSL G P L  F+SK
Subjt:  GTLSLCGIPPLACFWSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATAATAACAGTACTATTTGGAGCAACTTTAGCTCTTGCTCAAAAAGATATTAAGAGAAGTTTAGCCTATTCTACAATGTCTCAATTGGGTTATATGATGTTAGCCTTGGG
TATAGGGTCTTATCGGGCTGCTTTATTTAATTTTCTTACTCATGCTTATTCAAAAGCGTTGTTGTTTTTAGGATCTGGGTCCATTATTCACTCAATGGAATCGGTTGTTG
GATATTCTCCGGATAAAAGTAAGAATATGGTTCTTATGGGTGGTTTAACAAAGCATGTGCCAATTACAAAAAATGCTTTTTTATTAGGTACCCTTTCTCTTTGTGGTATT
CCCCCCCTTGCCTGCTTTTGGTCCAAA
mRNA sequenceShow/hide mRNA sequence
ATAATAACAGTACTATTTGGAGCAACTTTAGCTCTTGCTCAAAAAGATATTAAGAGAAGTTTAGCCTATTCTACAATGTCTCAATTGGGTTATATGATGTTAGCCTTGGG
TATAGGGTCTTATCGGGCTGCTTTATTTAATTTTCTTACTCATGCTTATTCAAAAGCGTTGTTGTTTTTAGGATCTGGGTCCATTATTCACTCAATGGAATCGGTTGTTG
GATATTCTCCGGATAAAAGTAAGAATATGGTTCTTATGGGTGGTTTAACAAAGCATGTGCCAATTACAAAAAATGCTTTTTTATTAGGTACCCTTTCTCTTTGTGGTATT
CCCCCCCTTGCCTGCTTTTGGTCCAAA
Protein sequenceShow/hide protein sequence
IITVLFGATLALAQKDIKRSLAYSTMSQLGYMMLALGIGSYRAALFNFLTHAYSKALLFLGSGSIIHSMESVVGYSPDKSKNMVLMGGLTKHVPITKNAFLLGTLSLCGI
PPLACFWSK