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MS022847 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022847
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibosomal protein S1
Genome locationscaffold29:176454..176954
RNA-Seq ExpressionMS022847
SyntenyMS022847
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QCB20452.1 ribosomal protein S1 [Actinidia chinensis]2.5e-8395.81Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKI +TNTKVKGFII+K KGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

QDS78274.2 ribosomal protein S1 [Camellia sinensis var. assamica]4.3e-8395.21Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQ+EPTGVPINRA RFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKI +TNTKVKGFII+KVKGGYSVAIAGFITFLPFRPLIS+RISNDRFTIESINPKRTNIVVF
Subjt:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

XP_022974554.1 uncharacterized protein LOC111473236 [Cucurbita maxima]3.9e-8496.41Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKE ILERFFIDLVAGESLI ERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKI QTNTKVKGFII+KVKGGYSVAIAGFITFLPFRPLISQRISN+RFTIESINPKRTNIVVF
Subjt:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

YP_009676235.1 ribosomal protein S1 [Camellia sinensis]4.3e-8395.21Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQ+EPTGVPINRA RFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKI +TNTKVKGFII+KVKGGYSVAIAGFITFLPFRPLIS+RISNDRFTIESINPKRTNIVVF
Subjt:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

YP_009706796.1 ribosomal protein S1 [Ilex pubescens]3.9e-8496.41Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKI +TNTKVKGFII+KVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

TrEMBL top hitse value%identityAlignment
A0A4D6FU87 Ribosomal protein S11.2e-8395.81Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKI +TNTKVKGFII+K KGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

A0A4D6J5C9 Ribosomal protein S11.2e-8395.81Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKI +TNTKVKGFII+K KGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

A0A4D6J9G9 Ribosomal protein S11.2e-8395.81Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKI +TNTKVKGFII+K KGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

A0A5C2I386 Ribosomal protein S11.9e-8496.41Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKI +TNTKVKGFII+KVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

A0A6J1IHY3 uncharacterized protein LOC1114732361.9e-8496.41Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGESLIKE ILERFFIDLVAGESLI ERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKI QTNTKVKGFII+KVKGGYSVAIAGFITFLPFRPLISQRISN+RFTIESINPKRTNIVVF
Subjt:  WMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

SwissProt top hitse value%identityAlignment
P26863 Ribosomal protein S1, mitochondrial9.9e-1434.68Show/hide
Query:  LVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDV-VAGEPLFLLPR----RFRQ
        LVD G  TP IC Q E   VPI + ARF                                               G  DV V GEP  LLP+    + ++
Subjt:  LVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDV-VAGEPLFLLPR----RFRQ

Query:  NRAWMELNKIGQTNTK-VKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDR---FTIESINPKRTNIVV
           W+EL KI +++   VKGFI++ VKGGY+VAIAG+I FLP   L S+++   +   F+I ++ PK +NIVV
Subjt:  NRAWMELNKIGQTNTK-VKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDR---FTIESINPKRTNIVV

Q6NDP1 30S ribosomal protein S18.4e-0536.71Show/hide
Query:  RQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLP-----FRPL--ISQRISNDR-FTIESINPKRTNIVV
        R+  +W +L K  Q N KV G I ++VKGG++V + G + FLP      RP+  ++  ++N + F I  ++ +R NIVV
Subjt:  RQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLP-----FRPL--ISQRISNDR-FTIESINPKRTNIVV

Q83E09 30S ribosomal protein S15.5e-0434.18Show/hide
Query:  RQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLP-----FRPLISQRISNDR---FTIESINPKRTNIVV
        R+ +AW EL K  +    VKG II++VKGG++V +     FLP      +P+       D+   F I  ++ +R N+VV
Subjt:  RQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLP-----FRPLISQRISNDR---FTIESINPKRTNIVV

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGTGGATGCAGGACCTGGGACCCCCAGAATTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCGCCAGGTTTGAGAATAAGGTGGGATCCCT
GGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCAAATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCGGCGAGCGAGCTGCCGCCAGGTTTA
ATGATTTGGTGGGATCCACAGATGTAGTGGCTGGTGAACCGCTTTTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAGATTGGGCAAACG
AATACAAAGGTCAAAGGCTTTATTATTGATAAAGTCAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCCGTCCTCTCATAAGTCAAAGGAT
ATCGAATGATCGATTCACCATTGAGAGCATTAACCCCAAAAGAACGAATATTGTGGTGTTC
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGGTGGATGCAGGACCTGGGACCCCCAGAATTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCGCCAGGTTTGAGAATAAGGTGGGATCCCT
GGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCAAATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCGGCGAGCGAGCTGCCGCCAGGTTTA
ATGATTTGGTGGGATCCACAGATGTAGTGGCTGGTGAACCGCTTTTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAGATTGGGCAAACG
AATACAAAGGTCAAAGGCTTTATTATTGATAAAGTCAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCCGTCCTCTCATAAGTCAAAGGAT
ATCGAATGATCGATTCACCATTGAGAGCATTAACCCCAAAAGAACGAATATTGTGGTGTTC
Protein sequenceShow/hide protein sequence
MFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIGQT
NTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF