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MS022854 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022854
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNADH-ubiquinone oxidoreductase chain 1
Genome locationscaffold29:211441..211569
RNA-Seq ExpressionMS022854
SyntenyMS022854
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047140.1 hypothetical protein E6C27_scaffold49037G00040 [Cucumis melo var. makuwa]1.0e-0473.68Show/hide
Query:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEAR
        M  K+   NRKGGQVGSR RWSKERGGPDAGTEP + R
Subjt:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEAR

KAA0058821.1 putative RNA-binding protein YlmH isoform X1 [Cucumis melo var. makuwa]1.4e-0469.77Show/hide
Query:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEARVSRTV
        M  K++  N KGGQVGSR  WSKERGG D  TEPYEARVS TV
Subjt:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEARVSRTV

KAF4349940.1 hypothetical protein G4B88_002362 [Cannabis sativa]1.1e-1190.48Show/hide
Query:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEARVSRT
        MKR RLPRNRKGGQVGSR RWSKERGGPD+GTEPY+ARVSRT
Subjt:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEARVSRT

XP_016901905.1 PREDICTED: putative RNA-binding protein YlmH isoform X1 [Cucumis melo]1.4e-0469.77Show/hide
Query:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEARVSRTV
        M  K++  N KGGQVGSR  WSKERGG D  TEPYEARVS TV
Subjt:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEARVSRTV

XP_016901906.1 PREDICTED: uncharacterized protein LOC103496076 isoform X3 [Cucumis melo]1.4e-0469.77Show/hide
Query:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEARVSRTV
        M  K++  N KGGQVGSR  WSKERGG D  TEPYEARVS TV
Subjt:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEARVSRTV

TrEMBL top hitse value%identityAlignment
A0A1S4E1P4 putative RNA-binding protein YlmH isoform X16.6e-0569.77Show/hide
Query:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEARVSRTV
        M  K++  N KGGQVGSR  WSKERGG D  TEPYEARVS TV
Subjt:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEARVSRTV

A0A5A7TVE9 Uncharacterized protein5.0e-0573.68Show/hide
Query:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEAR
        M  K+   NRKGGQVGSR RWSKERGGPDAGTEP + R
Subjt:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEAR

A0A5A7UZA5 Putative RNA-binding protein YlmH isoform X16.6e-0569.77Show/hide
Query:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEARVSRTV
        M  K++  N KGGQVGSR  WSKERGG D  TEPYEARVS TV
Subjt:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEARVSRTV

A0A5D3CIR0 Beta-galactosidase6.6e-0569.77Show/hide
Query:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEARVSRTV
        M  K++  N KGGQVGSR  WSKERGG D  TEPYEARVS TV
Subjt:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEARVSRTV

A0A7J6DW83 NADH-ubiquinone oxidoreductase chain 15.5e-1290.48Show/hide
Query:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEARVSRT
        MKR RLPRNRKGGQVGSR RWSKERGGPD+GTEPY+ARVSRT
Subjt:  MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEARVSRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGAAAGCGCTTACCGAGGAATAGAAAGGGAGGACAGGTTGGTTCGAGGGCCCGTTGGTCAAAGGAAAGGGGAGGTCCTGATGCCGGGACGGAGCCGTATGAGGC
GAGAGTGTCACGTACGGTT
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGAAAGCGCTTACCGAGGAATAGAAAGGGAGGACAGGTTGGTTCGAGGGCCCGTTGGTCAAAGGAAAGGGGAGGTCCTGATGCCGGGACGGAGCCGTATGAGGC
GAGAGTGTCACGTACGGTT
Protein sequenceShow/hide protein sequence
MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEARVSRTV