; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022857 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022857
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMaturase
Genome locationscaffold29:213863..214258
RNA-Seq ExpressionMS022857
SyntenyMS022857
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0007005 - mitochondrion organization (biological process)
GO:0009845 - seed germination (biological process)
GO:0032885 - regulation of polysaccharide biosynthetic process (biological process)
GO:0090615 - mitochondrial mRNA processing (biological process)
GO:1900864 - mitochondrial RNA modification (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAN65201.1 maturase, partial [Corynocarpus laevigatus]3.2e-6597.66Show/hide
Query:  EAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPH
        EAIRMVLESIYDPEFPDTSHF SGRGRHSALRRIKEEWGTSR FLEFDIRKCFHTIDRHRLISIFKEEIDDPKFF SIQKVFSVGRLVGGEKGPYYSVPH
Subjt:  EAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPH

Query:  SVLLSALPGNIYLHKLDQEIGRIRQKYE
        SVLLSALPGNIYLHKLDQEIGRIRQKYE
Subjt:  SVLLSALPGNIYLHKLDQEIGRIRQKYE

AAQ08727.1 maturase, partial [Tetrameles nudiflora]1.1e-6597.66Show/hide
Query:  EAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPH
        EAIRMVL SIYDPEFPDTSHF SGRGRHSALRRIKEEWGTSR FLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPH
Subjt:  EAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPH

Query:  SVLLSALPGNIYLHKLDQEIGRIRQKYE
        SVLLSALPGNIYLHKLDQEIGRIRQKYE
Subjt:  SVLLSALPGNIYLHKLDQEIGRIRQKYE

AAQ08729.1 maturase, partial [Hemsleya lijiangensis]2.5e-6598.4Show/hide
Query:  RMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVL
        RM LESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSR FLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVL
Subjt:  RMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVL

Query:  LSALPGNIYLHKLDQEIGRIRQKYE
        LSALPGNIYLHKLDQEIGRIRQKYE
Subjt:  LSALPGNIYLHKLDQEIGRIRQKYE

YP_003587246.1 maturase, partial [Citrullus lanatus]4.8e-6998.48Show/hide
Query:  KIMNEAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYY
        KIM EAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSR FLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYY
Subjt:  KIMNEAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYY

Query:  SVPHSVLLSALPGNIYLHKLDQEIGRIRQKYE
        SVPHSVLLSALPGNIYLHKLDQEIGRIRQKYE
Subjt:  SVPHSVLLSALPGNIYLHKLDQEIGRIRQKYE

YP_009913627.1 maturase [Luffa acutangula]2.4e-6897.73Show/hide
Query:  KIMNEAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYY
        KIM EAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSR FLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGG KGPYY
Subjt:  KIMNEAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYY

Query:  SVPHSVLLSALPGNIYLHKLDQEIGRIRQKYE
        SVPHSVLLSALPGNIYLHKLDQEIGRIRQKYE
Subjt:  SVPHSVLLSALPGNIYLHKLDQEIGRIRQKYE

TrEMBL top hitse value%identityAlignment
A0A7D6C8J7 Maturase1.2e-6897.73Show/hide
Query:  KIMNEAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYY
        KIM EAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSR FLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGG KGPYY
Subjt:  KIMNEAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYY

Query:  SVPHSVLLSALPGNIYLHKLDQEIGRIRQKYE
        SVPHSVLLSALPGNIYLHKLDQEIGRIRQKYE
Subjt:  SVPHSVLLSALPGNIYLHKLDQEIGRIRQKYE

D5I3B6 Maturase (Fragment)2.3e-6998.48Show/hide
Query:  KIMNEAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYY
        KIM EAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSR FLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYY
Subjt:  KIMNEAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYY

Query:  SVPHSVLLSALPGNIYLHKLDQEIGRIRQKYE
        SVPHSVLLSALPGNIYLHKLDQEIGRIRQKYE
Subjt:  SVPHSVLLSALPGNIYLHKLDQEIGRIRQKYE

Q4L2V8 Maturase (Fragment)1.6e-6597.66Show/hide
Query:  EAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPH
        EAIRMVLESIYDPEFPDTSHF SGRGRHSALRRIKEEWGTSR FLEFDIRKCFHTIDRHRLISIFKEEIDDPKFF SIQKVFSVGRLVGGEKGPYYSVPH
Subjt:  EAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPH

Query:  SVLLSALPGNIYLHKLDQEIGRIRQKYE
        SVLLSALPGNIYLHKLDQEIGRIRQKYE
Subjt:  SVLLSALPGNIYLHKLDQEIGRIRQKYE

Q4W4G6 Maturase (Fragment)1.2e-6598.4Show/hide
Query:  RMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVL
        RM LESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSR FLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVL
Subjt:  RMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVL

Query:  LSALPGNIYLHKLDQEIGRIRQKYE
        LSALPGNIYLHKLDQEIGRIRQKYE
Subjt:  LSALPGNIYLHKLDQEIGRIRQKYE

Q4W4G8 Maturase (Fragment)5.4e-6697.66Show/hide
Query:  EAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPH
        EAIRMVL SIYDPEFPDTSHF SGRGRHSALRRIKEEWGTSR FLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPH
Subjt:  EAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPH

Query:  SVLLSALPGNIYLHKLDQEIGRIRQKYE
        SVLLSALPGNIYLHKLDQEIGRIRQKYE
Subjt:  SVLLSALPGNIYLHKLDQEIGRIRQKYE

SwissProt top hitse value%identityAlignment
B1N1A3 Putative nicotine oxidoreductase8.4e-1631.82Show/hide
Query:  KIMNEAIRMVLESIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPY
        K++ E IR +LE+IY+P F   SH F +G+  H+AL++++E W      +E DI+ CF  I   +LI   +  I D +F   I+K  + G     E G +
Subjt:  KIMNEAIRMVLESIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPY

Query:  YS----VPHSVLLSALPGNIYLHKLDQEIGRI
        +S     P   ++S +  N++L +LD+++ ++
Subjt:  YS----VPHSVLLSALPGNIYLHKLDQEIGRI

P05511 Uncharacterized 91 kDa protein in cob intron1.3e-1635.07Show/hide
Query:  KIMNEAIRMVLESIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGE-KGP
        K++ E +R+VLE+IY+P F   SH F  GR  HSALR I   +     ++E DI+ CF +I   +LI++   +I D +F   I+K  + G L     K  
Subjt:  KIMNEAIRMVLESIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGE-KGP

Query:  YYSVPHSVLLSALPGNIYLHKLDQEIGRIRQKYE
            P   ++S +  NIYLH+LD+ I  ++ +++
Subjt:  YYSVPHSVLLSALPGNIYLHKLDQEIGRIRQKYE

P0A3U0 Group II intron-encoded protein LtrA1.9e-2041.04Show/hide
Query:  KIMNEAIRMVLESIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPY
        K++ EA+R++LESIY+P F D SH F   R  H+AL+ IK E+G +R F+E DI+ CF  ID   LI +   +I D K    I K    G L   +    
Subjt:  KIMNEAIRMVLESIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPY

Query:  YS-VPHSVLLSALPGNIYLHKLDQEIGRIRQKYE
        YS  P   +LS L  NIYLH+LD+ + +++ K++
Subjt:  YS-VPHSVLLSALPGNIYLHKLDQEIGRIRQKYE

P0A3U1 Group II intron-encoded protein LtrA1.9e-2041.04Show/hide
Query:  KIMNEAIRMVLESIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPY
        K++ EA+R++LESIY+P F D SH F   R  H+AL+ IK E+G +R F+E DI+ CF  ID   LI +   +I D K    I K    G L   +    
Subjt:  KIMNEAIRMVLESIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPY

Query:  YS-VPHSVLLSALPGNIYLHKLDQEIGRIRQKYE
        YS  P   +LS L  NIYLH+LD+ + +++ K++
Subjt:  YS-VPHSVLLSALPGNIYLHKLDQEIGRIRQKYE

P38478 Uncharacterized mitochondrial protein ymf407.1e-1536.57Show/hide
Query:  KIMNEAIRMVLESIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPY
        KI+ E +R +LE +++P F D+SH F   R  H+ALR+I+   GTS   +E DI+  F  ID H L     E + D +      K+   G +  G+  P+
Subjt:  KIMNEAIRMVLESIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPY

Query:  Y--SVPHSVLLSALPGNIYLHKLDQEIGRIRQKY
            VP   +LS L  NIYLH+ D  +  I+ KY
Subjt:  Y--SVPHSVLLSALPGNIYLHKLDQEIGRIRQKY

Arabidopsis top hitse value%identityAlignment
AT1G74350.1 Intron maturase, type II family protein5.8e-1231.62Show/hide
Query:  KIMNEAIRMVLESIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPY
        K++ EAIR+VLE ++ P F   SH   SGRGR SAL+ I      S       + K         L+S+ +E+++D      ++ +F   R++  E G +
Subjt:  KIMNEAIRMVLESIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPY

Query:  ---YSVPHSVLLSALPGNIYLHKLDQEIGRIRQKYE
           + +P   +LS +  NIYL + D E  RI  ++E
Subjt:  ---YSVPHSVLLSALPGNIYLHKLDQEIGRIRQKYE

AT5G04050.1 RNA-directed DNA polymerase (reverse transcriptase)3.0e-0832.35Show/hide
Query:  KIMNEAIRMVLESIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSRRFLEFDI-RKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVG----RLVGG
        K++ EAIRMVLE +YD  F   S+    G GRH+A+R +K      R +      R+ F   +   L     E+I+D      I+K+F  G     L G 
Subjt:  KIMNEAIRMVLESIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSRRFLEFDI-RKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVG----RLVGG

Query:  EKGPYYSVPHSVLLSALPGNIYLHKLDQEIGRIRQK
          G  +  P    L ++  N+Y   LD+EI  +R K
Subjt:  EKGPYYSVPHSVLLSALPGNIYLHKLDQEIGRIRQK

AT5G04050.2 RNA-directed DNA polymerase (reverse transcriptase)3.0e-0832.35Show/hide
Query:  KIMNEAIRMVLESIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSRRFLEFDI-RKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVG----RLVGG
        K++ EAIRMVLE +YD  F   S+    G GRH+A+R +K      R +      R+ F   +   L     E+I+D      I+K+F  G     L G 
Subjt:  KIMNEAIRMVLESIYDPEFPDTSH-FHSGRGRHSALRRIKEEWGTSRRFLEFDI-RKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVG----RLVGG

Query:  EKGPYYSVPHSVLLSALPGNIYLHKLDQEIGRIRQK
          G  +  P    L ++  N+Y   LD+EI  +R K
Subjt:  EKGPYYSVPHSVLLSALPGNIYLHKLDQEIGRIRQK

ATMG00520.1 Intron maturase, type II family protein2.2e-6490.15Show/hide
Query:  KIMNEAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYY
        KIM EAIRMVLESIYDPEFPDTSHF SG+G HS LRRIKEEWG SR FLEFDIRKCFHTIDRHRLI I KEEIDDPKFFYSIQKVFS GRLVG E+GP Y
Subjt:  KIMNEAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYY

Query:  SVPHSVLLSALPGNIYLHKLDQEIGRIRQKYE
        SVPHSVLLSALPGNIYLHKLDQEIGRIRQKYE
Subjt:  SVPHSVLLSALPGNIYLHKLDQEIGRIRQKYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGATCATGAACGAGGCGATCAGAATGGTACTCGAATCCATTTACGATCCCGAGTTTCCAGACACATCGCACTTCCACTCGGGTCGAGGCCGCCACTCGGCCCTAAGACG
GATCAAAGAAGAGTGGGGAACCTCTCGCAGGTTTTTGGAATTCGACATCAGGAAGTGTTTTCACACCATCGACCGACATCGACTCATCTCAATCTTTAAGGAAGAGATCG
ACGATCCCAAGTTCTTTTACTCCATTCAGAAAGTCTTTTCCGTCGGACGACTCGTAGGAGGTGAGAAGGGCCCTTACTACTCCGTCCCACACAGTGTACTACTATCGGCC
CTACCAGGCAACATCTACCTACACAAGCTCGATCAGGAGATAGGGAGGATCCGACAGAAGTACGAA
mRNA sequenceShow/hide mRNA sequence
AAGATCATGAACGAGGCGATCAGAATGGTACTCGAATCCATTTACGATCCCGAGTTTCCAGACACATCGCACTTCCACTCGGGTCGAGGCCGCCACTCGGCCCTAAGACG
GATCAAAGAAGAGTGGGGAACCTCTCGCAGGTTTTTGGAATTCGACATCAGGAAGTGTTTTCACACCATCGACCGACATCGACTCATCTCAATCTTTAAGGAAGAGATCG
ACGATCCCAAGTTCTTTTACTCCATTCAGAAAGTCTTTTCCGTCGGACGACTCGTAGGAGGTGAGAAGGGCCCTTACTACTCCGTCCCACACAGTGTACTACTATCGGCC
CTACCAGGCAACATCTACCTACACAAGCTCGATCAGGAGATAGGGAGGATCCGACAGAAGTACGAA
Protein sequenceShow/hide protein sequence
KIMNEAIRMVLESIYDPEFPDTSHFHSGRGRHSALRRIKEEWGTSRRFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYSIQKVFSVGRLVGGEKGPYYSVPHSVLLSA
LPGNIYLHKLDQEIGRIRQKYE