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MS022862 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022862
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationscaffold29:234310..234481
RNA-Seq ExpressionMS022862
SyntenyMS022862
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0030154 - cell differentiation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR044987 - Uncharacterized mitochondrial protein AtMg00030-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEX14218.1 putative mitochondrial protein [Tanacetum cinerariifolium]1.3e-2396.49Show/hide
Query:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPASIQCILFDL
        FAKFEKSKERRLATELGYGFPIGDPWITDGIS WPFASESVLPSQC ASIQCILFDL
Subjt:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPASIQCILFDL
KAA0066854.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.0e-2090.91Show/hide
Query:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPASIQCILF
        FAKFEKSKERRLA ELGY FPI DPWITD ISPWPFASESVLPSQC ASIQCILF
Subjt:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPASIQCILF
KAD4384359.1 hypothetical protein E3N88_24527 [Mikania micrantha]8.9e-20100Show/hide
Query:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
        FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
Subjt:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
PHT25004.1 hypothetical protein CQW23_35343 [Capsicum baccatum]8.9e-20100Show/hide
Query:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
        FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
Subjt:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
YP_173374.1 hypothetical protein NitaMp027 [Nicotiana tabacum]8.9e-20100Show/hide
Query:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
        FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
Subjt:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
TrEMBL top hitse value%identityAlignment
A0A161X3X2 Uncharacterized protein4.3e-20100Show/hide
Query:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
        FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
Subjt:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
A0A1J6INJ4 Putative mitochondrial protein4.3e-20100Show/hide
Query:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
        FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
Subjt:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
A0A5A7VHN2 Putative mitochondrial protein1.9e-2090.91Show/hide
Query:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPASIQCILF
        FAKFEKSKERRLA ELGY FPI DPWITD ISPWPFASESVLPSQC ASIQCILF
Subjt:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPASIQCILF
A0A5C7GP19 Uncharacterized protein4.3e-20100Show/hide
Query:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
        FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
Subjt:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
Q5M9R1 Uncharacterized protein4.3e-20100Show/hide
Query:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
        FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
Subjt:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
SwissProt top hitse value%identityAlignment
P93276 Uncharacterized mitochondrial protein AtMg000304.4e-2297.87Show/hide
Query:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
        FAKF KSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
Subjt:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
Arabidopsis top hitse value%identityAlignment
ATMG00030.1 hypothetical protein3.1e-2397.87Show/hide
Query:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
        FAKF KSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
Subjt:  FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCGCTAAGTTTGAAAAGTCCAAAGAGCGCAGACTAGCCACGGAGCTTGGATACGGTTTCCCGATCGGAGATCCATGGATCACAGACGGTATCTCCCCATGGCCTTTCGC
CTCTGAAAGCGTCCTTCCTTCTCAATGCCCGGCATCCATCCAATGCATTCTTTTCGATCTT
mRNA sequenceShow/hide mRNA sequence
TTCGCTAAGTTTGAAAAGTCCAAAGAGCGCAGACTAGCCACGGAGCTTGGATACGGTTTCCCGATCGGAGATCCATGGATCACAGACGGTATCTCCCCATGGCCTTTCGC
CTCTGAAAGCGTCCTTCCTTCTCAATGCCCGGCATCCATCCAATGCATTCTTTTCGATCTT
Protein sequenceShow/hide protein sequence
FAKFEKSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCPASIQCILFDL