CuGenDBv2

Gene ID	MS022863
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	CcmF_C domain-containing protein
Genome location	scaffold29:241774..242502
RNA-Seq Expression	MS022863
Synteny	MS022863
Gene Ontology terms	GO:0017004 - cytochrome complex assembly (biological process) GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR044955 - Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAB5511257.1 hypothetical protein DKX38_030052 [Salix brachista]

2.2e-86

82.13

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Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP
        MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGN MIYKPSLTNDRL+FEHD+ LRAD L INFP
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP

Query:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQL
        ASYENGKLEHFLH+WM NREHNNFWLTMFPEKRYFRETTSTTEVAIHTN FTDLYAS   GS+    ++ T     F ++  +     SLGGSRSLLRQL
Subjt:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQL

Query:  QKDKLRW
        +KDKLRW
Subjt:  QKDKLRW

KAF9660778.1 hypothetical protein SADUNF_SadunfMtG0009900 [Salix dunnii]

2.2e-86

82.13

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Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP
        MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGN MIYKPSLTNDRL+FEHD+ LRAD L INFP
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP

Query:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQL
        ASYENGKLEHFLH+WM NREHNNFWLTMFPEKRYFRETTSTTEVAIHTN FTDLYAS   GS+    ++ T     F ++  +     SLGGSRSLLRQL
Subjt:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQL

Query:  QKDKLRW
        +KDKLRW
Subjt:  QKDKLRW

KAG6736883.1 hypothetical protein POTOM_060194 [Populus tomentosa]

2.2e-86

82.13

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Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP
        MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGN MIYKPSLTNDRL+FEHD+ LRAD L INFP
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP

Query:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQL
        ASYENGKLEHFLH+WM NREHNNFWLTMFPEKRYFRETTSTTEVAIHTN FTDLYAS   GS+    ++ T     F ++  +     SLGGSRSLLRQL
Subjt:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQL

Query:  QKDKLRW
        +KDKLRW
Subjt:  QKDKLRW

QTC32822.1 cytochrome c biogenesis FC [Ormosia boluoensis]

2.9e-86

80.77

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Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP
        MRQKL  RTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCC RGLDHLHGPTSHSICGN MIYKPSLTNDRL+FEHD+ LRAD LPINFP
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP

Query:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQL
        ASYENGKLEHFLH+WM NREHNN WLTMFPEKRYFRETTSTTEVAIHTNPFTD YAS   GS+    ++ T     F ++  +     S GGSRSLLRQL
Subjt:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQL

Query:  QKDKLRWN
        QKDKLRWN
Subjt:  QKDKLRWN

XP_028063424.1 uncharacterized protein LOC114266701 [Camellia sinensis]

1.2e-87

82.21

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Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP
        MRQKLVSRTVRRPSPTPAV VRLRSTNTKK+QFTQRLPLGSELHMGKERCCLRGLDHLHGPT HSICGN MIYKPSLTNDRL+FEHD+ LRAD LPINFP
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP

Query:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCT------CFSYYSG--MNSLGGSRSLLRQL
        ASYENGKLEHFLH+WM NREHNN WLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS   GS+    ++ T       F  + G  + SLGGSRSLLRQL
Subjt:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCT------CFSYYSG--MNSLGGSRSLLRQL

Query:  QKDKLRWN
        QKDKLRWN
Subjt:  QKDKLRWN

TrEMBL top hits

e value

%identity

Alignment

A0A2I0HNR1 CcmF_C domain-containing protein

2.4e-86

81.34

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Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP
        MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGN MIYKPSL NDRL+FEHD+ LRAD LPI+FP
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP

Query:  ASYENGKLEHFLHQWMTNREHNNF-WLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQ
        ASYENGKLEHFLH+W+ NREHNNF WLTMFPEKRYFRE TSTTEVAIHTNPFTDLYAS   GS+    ++ T     F ++  +     SLGGSRSLLRQ
Subjt:  ASYENGKLEHFLHQWMTNREHNNF-WLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQ

Query:  LQKDKLRWN
        LQKDKLRWN
Subjt:  LQKDKLRWN

A0A5H2XRB1 Cytochrome C biogenesis 452

7.0e-86

80.77

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Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP
        MRQKLV RTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPT HSICGN MIYKPSLTNDRL+FEHD+ LRAD L IN P
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP

Query:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQL
        ASY+NGKLEHFLH+WM NREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS   GS+    ++ T     F ++  +     S GGSRSLLRQL
Subjt:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQL

Query:  QKDKLRWN
        QKDKLRWN
Subjt:  QKDKLRWN

A0A5N5J813 CcmF_C domain-containing protein

1.1e-86

82.13

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Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP
        MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGN MIYKPSLTNDRL+FEHD+ LRAD L INFP
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP

Query:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQL
        ASYENGKLEHFLH+WM NREHNNFWLTMFPEKRYFRETTSTTEVAIHTN FTDLYAS   GS+    ++ T     F ++  +     SLGGSRSLLRQL
Subjt:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQL

Query:  QKDKLRW
        +KDKLRW
Subjt:  QKDKLRW

A0A6J5X9C7 CcmF_C domain-containing protein

7.0e-86

80.77

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Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP
        MRQKLV RTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPT HSICGN MIYKPSLTNDRL+FEHD+ LRAD L IN P
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP

Query:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQL
        ASY+NGKLEHFLH+WM NREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS   GS+    ++ T     F ++  +     S GGSRSLLRQL
Subjt:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQL

Query:  QKDKLRWN
        QKDKLRWN
Subjt:  QKDKLRWN

E8ZCA3 Uncharacterized protein orf208

5.3e-86

81.25

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Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP
        MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPT HSICGN MIYKPSLTNDRLIFEHD+ LRAD L INF 
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFP

Query:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQL
        ASYENGKLEHFLH+WM NREH NFWL+MFPEKRYFRETTSTTEVAIHTNPFTDLYAS   GS+    ++ T     F ++  +     SLGGSRSLLRQL
Subjt:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQL

Query:  QKDKLRWN
        QK+KLRWN
Subjt:  QKDKLRWN

SwissProt top hits

e value

%identity

Alignment

P38451 Uncharacterized mitochondrial protein ymf2

1.2e-29

42.34

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Query:  TNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHD------------------------------------KE
        +N KKIQFT + PLGSELH+GK R  LRG+D LHGPT HSICGNF+IYKPSL     +FEHD                                     +
Subjt:  TNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHD------------------------------------KE

Query:  LRADQLPINFPASYENGKLEHFLHQWMTNREHNNF--WLTMFPEKRYF--RETTSTTEVAIHTNPFTDLYA---SGSACYCYYFCTC---FSYYSG----
         R  ++ + FP +    + + F     T  EHN+F  WLTMFPEKR++   + TSTT+VAIHTN FTDLYA   +GS    +Y       F +Y      
Subjt:  LRADQLPINFPASYENGKLEHFLHQWMTNREHNNF--WLTMFPEKRYF--RETTSTTEVAIHTNPFTDLYA---SGSACYCYYFCTC---FSYYSG----

Query:  MNSLGGSRSLLRQLQKDKLRWN
        M SLGG  SL R+L   +L WN
Subjt:  MNSLGGSRSLLRQLQKDKLRWN

P93286 Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein

1.2e-69

72.49

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Query:  MVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFPASYENGKLEHFLHQWMTNR
        M+ +  +NTKKIQFTQRLPLG ELHMGKERCCLRGLDHLHGPT HSICGN MIYK SLTNDRL+FEHD+ L AD L INFPASY+NGKLEHFLH WM NR
Subjt:  MVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFPASYENGKLEHFLHQWMTNR

Query:  EHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYA---SGSACYCYYFCT------CFSYYSG--MNSLGGSRSLLRQLQKDKLRWN
        +HNNFWLTMFPEKRYFRE TST EVAIHTN FTDLYA   +GS+    ++ T       F  + G  + SLGG  SLLRQLQKDKLRWN
Subjt:  EHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYA---SGSACYCYYFCT------CFSYYSG--MNSLGGSRSLLRQLQKDKLRWN

Arabidopsis top hits

e value

%identity

Alignment

ATMG00180.1 cytochrome C biogenesis 452

1.5e-72

73.54

Show/hide

Query:  MVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFPASYENGKLEHFLHQWMTNR
        M+ +  +NTKKIQFTQRLPLG ELHMGKERCCLRGLDHLHGPT HSICGN MIYKPSLTNDRL+FEHD+ L AD L INFPASY+NGKLEHFLH WM NR
Subjt:  MVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFPASYENGKLEHFLHQWMTNR

Query:  EHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQLQKDKLRWN
        +HNNFWLTMFPEKRYFRE TST EVAIHTN FTDLYAS   GS+    ++ T     F ++  +     SLGGS SLLRQLQKDKLRWN
Subjt:  EHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYAS---GSACYCYYFCTC----FSYYSGMN----SLGGSRSLLRQLQKDKLRWN

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGGCAGAAACTCGTCTCACGTACGGTTCGGAGGCCGAGCCCCACCCCAGCAGTAATGGTGCGGCTTAGGTCAACTAACACAAAGAAGATACAGTTCACTCAACGATT
GCCTTTGGGTTCCGAACTCCATATGGGGAAGGAGCGTTGTTGTTTGCGAGGTCTCGATCATTTACATGGACCCACTTCTCATTCCATTTGTGGTAATTTTATGATCTATA
AACCGTCCCTAACGAACGATCGGCTCATCTTTGAGCATGATAAAGAACTTCGTGCCGACCAGTTGCCAATAAACTTTCCGGCCTCATATGAGAATGGAAAACTGGAGCAT
TTTCTGCATCAGTGGATGACGAATCGCGAACATAATAATTTCTGGTTGACCATGTTCCCAGAAAAAAGATACTTTCGAGAAACGACGAGCACGACTGAAGTAGCTATACA
TACAAATCCATTTACGGATCTATATGCTTCTGGAAGCGCGTGCTACTGCTACTACTTTTGCACCTGCTTCTCCTATTATAGTGGAATGAACTCGTTGGGAGGCTCGCGTA
GTTTGTTACGTCAGCTCCAAAAGGATAAGTTGCGTTGGAAT

mRNA sequence

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Protein sequence

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MRQKLVSRTVRRPSPTPAVMVRLRSTNTKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKELRADQLPINFPASYENGKLEH
FLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASGSACYCYYFCTCFSYYSGMNSLGGSRSLLRQLQKDKLRWN

MS022863 (gene) of Bitter gourd (TR) v1 genome