; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS022870 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022870
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibosomal protein S4
Genome locationscaffold29:255731..256807
RNA-Seq ExpressionMS022870
SyntenyMS022870
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002942 - RNA-binding S4 domain
IPR022801 - Ribosomal protein S4/S9
IPR036986 - RNA-binding S4 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALJ78540.1 ribosomal protein S4, partial [Malus hupehensis var. mengshanensis]3.2e-19295.26Show/hide
Query:  VAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNP
        VAKKTDSTRYA+PALRF+TCRLL GNVRNRELTIIQRRILR+LRNKKRSIKRKIYPR+NLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNP
Subjt:  VAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNP

Query:  ETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLK
        ETRSDVIPVRLHF ETIPQARQPISH RVCVN GMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTK EWFHLLK
Subjt:  ETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLK

Query:  TKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQF
        T RGCRLLLKSRFL+QLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNR+ KKNRNLPTRTRSPIVYNSSLY NSTYCSASPHQF
Subjt:  TKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQF

Query:  TMKSKIKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
        TMK +IKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKD NLPLRSGNGRGQNI
Subjt:  TMKSKIKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI

CBX33388.1 ribosomal protein S4 [Malus domestica]5.1e-19094.43Show/hide
Query:  VAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNP
        +AKKTDSTRYA+PALRF+TCRLL GNVRNRELTIIQRRILR+LRNKKRSIKRKIYPR+NLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNP
Subjt:  VAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNP

Query:  ETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLK
        ETRSDVIPVRLHF ETIPQARQPISH RVCVN GMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTK EWFHLLK
Subjt:  ETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLK

Query:  TKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQF
        T RGCRLLLKSRFL+QLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNR+ KKNRNLPTRTRSPIVYNSSLY NSTYCSASPHQF
Subjt:  TKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQF

Query:  TMKSKIKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
        TMK +IKRIELPTH SEVNHRTLKAVVSYGPNIGHIPHDIRLKD NL LRSGNGRGQNI
Subjt:  TMKSKIKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI

PRQ15652.1 putative ribosomal protein S4/S9 [Rosa chinensis]4.4e-18993.87Show/hide
Query:  VAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNP
        VAKKTDSTRYALPALRF+TCRLL GNVRNRELTIIQRRILR+LRNKKRSIKRKIYPR+NLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNP
Subjt:  VAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNP

Query:  ETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLK
        ETRSDVIPVRLHF ETIPQARQPISHRRVCVN GMVSITH KVSH DLI FQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLK
Subjt:  ETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLK

Query:  TKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQF
        T+RGCRLLLKSRFLQQL SSMQEEDLE+TK+FGSEKVCLGSSFAEHNRMKRNLYHFKSLFLS R+ +KNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQF
Subjt:  TKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQF

Query:  TMKSKIKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
        TMK +IKRIELPTHYSEVNHRT KAVVSYGPNIGHIPHDIRLKD NLPLRSGNG GQNI
Subjt:  TMKSKIKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI

WP_131747055.1 hypothetical protein [Candidatus Frankia meridionalis]3.0e-19097.13Show/hide
Query:  LPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRL
        + ALRF+TCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPR NLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRL
Subjt:  LPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVRL

Query:  HFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKS
        HF ETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKS
Subjt:  HFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKS

Query:  RFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSKIKRIEL
        RFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRN YHFKSLFLSNR+ +KNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMK KIKRIEL
Subjt:  RFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSKIKRIEL

Query:  PTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
        PTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
Subjt:  PTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI

YP_009913620.1 ribosomal protein S4 [Luffa acutangula]2.2e-19698.59Show/hide
Query:  DSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSD
        DSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSD
Subjt:  DSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSD

Query:  VIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGC
        VIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGD ISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGC
Subjt:  VIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGC

Query:  RLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSK
        RLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYH KSLFLSNR+ +KNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSK
Subjt:  RLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSK

Query:  IKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
        IKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
Subjt:  IKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI

TrEMBL top hitse value%identityAlignment
A0A0U2N8V3 Ribosomal protein S4 (Fragment)1.6e-19295.26Show/hide
Query:  VAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNP
        VAKKTDSTRYA+PALRF+TCRLL GNVRNRELTIIQRRILR+LRNKKRSIKRKIYPR+NLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNP
Subjt:  VAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNP

Query:  ETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLK
        ETRSDVIPVRLHF ETIPQARQPISH RVCVN GMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTK EWFHLLK
Subjt:  ETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLK

Query:  TKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQF
        T RGCRLLLKSRFL+QLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNR+ KKNRNLPTRTRSPIVYNSSLY NSTYCSASPHQF
Subjt:  TKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQF

Query:  TMKSKIKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
        TMK +IKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKD NLPLRSGNGRGQNI
Subjt:  TMKSKIKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI

A0A2P6P148 Putative ribosomal protein S4/S92.1e-18993.87Show/hide
Query:  VAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNP
        VAKKTDSTRYALPALRF+TCRLL GNVRNRELTIIQRRILR+LRNKKRSIKRKIYPR+NLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNP
Subjt:  VAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNP

Query:  ETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLK
        ETRSDVIPVRLHF ETIPQARQPISHRRVCVN GMVSITH KVSH DLI FQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLK
Subjt:  ETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLK

Query:  TKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQF
        T+RGCRLLLKSRFLQQL SSMQEEDLE+TK+FGSEKVCLGSSFAEHNRMKRNLYHFKSLFLS R+ +KNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQF
Subjt:  TKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQF

Query:  TMKSKIKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
        TMK +IKRIELPTHYSEVNHRT KAVVSYGPNIGHIPHDIRLKD NLPLRSGNG GQNI
Subjt:  TMKSKIKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI

A0A7D6BZG8 Ribosomal protein S41.0e-19698.59Show/hide
Query:  DSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSD
        DSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSD
Subjt:  DSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSD

Query:  VIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGC
        VIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGD ISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGC
Subjt:  VIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGC

Query:  RLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSK
        RLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYH KSLFLSNR+ +KNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSK
Subjt:  RLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSK

Query:  IKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
        IKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
Subjt:  IKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI

A0A7H0DH67 Ribosomal protein S42.8e-18693.52Show/hide
Query:  TDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRS
        TDSTRYALPALRF+TCRLL GNVRNRELTIIQRRILR+LRNKKRSIKRKIYPR+NLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRS
Subjt:  TDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRS

Query:  DVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRG
        DVIPVRLHF ETIPQARQPISHRRVCVN GMVSITH KVSH DLI FQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTK EWFHLLKT+RG
Subjt:  DVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRG

Query:  CRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKS
        CR LLKSRFLQQL SSMQEEDLERTK+FGSEKVCLGSSFAEHNRMKRNLYHFKSLFLS R+ +KNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMK 
Subjt:  CRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKS

Query:  KIKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
        +IKRIELPTHYSEVNHRT KAVVSYGPNIGHIPHDIRLKD NLPLRSGNG GQNI
Subjt:  KIKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI

J9JES1 Ribosomal protein S42.5e-19094.43Show/hide
Query:  VAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNP
        +AKKTDSTRYA+PALRF+TCRLL GNVRNRELTIIQRRILR+LRNKKRSIKRKIYPR+NLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNP
Subjt:  VAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNP

Query:  ETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLK
        ETRSDVIPVRLHF ETIPQARQPISH RVCVN GMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTK EWFHLLK
Subjt:  ETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLK

Query:  TKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQF
        T RGCRLLLKSRFL+QLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNR+ KKNRNLPTRTRSPIVYNSSLY NSTYCSASPHQF
Subjt:  TKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQF

Query:  TMKSKIKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
        TMK +IKRIELPTH SEVNHRTLKAVVSYGPNIGHIPHDIRLKD NL LRSGNGRGQNI
Subjt:  TMKSKIKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI

SwissProt top hitse value%identityAlignment
A1S242 30S ribosomal protein S47.4e-0635.11Show/hide
Query:  ETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQE---NDARIR-----GEEIRRSFYIEISVEKIIGKFLDHPVR
        ETR D +  R+ F  T  +ARQ +SH+ V VN  +V+I  FKVS  D++S +E     ARI+       +  +  ++E+   K+ G F   P R
Subjt:  ETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQE---NDARIR-----GEEIRRSFYIEISVEKIIGKFLDHPVR

A3Q9A6 30S ribosomal protein S49.6e-0635.11Show/hide
Query:  ETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQE---NDARIR-----GEEIRRSFYIEISVEKIIGKFLDHPVR
        ETR D +  R+ F  T  +ARQ +SH+ + VN  +V+I  FKVS  D+IS +E     ARI+       +  +  ++E+   K+ G F   P R
Subjt:  ETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQE---NDARIR-----GEEIRRSFYIEISVEKIIGKFLDHPVR

A8Z690 30S ribosomal protein S42.1e-0536.78Show/hide
Query:  ETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQE-NDARIRGEEIRRSFYIEISVEKIIGKFLDHPVR
        E+R D I  RL+ S + P+ARQ +SHR + VN  +V+I  F +  GD IS +E +  +    ++  S ++    EK+IG F   P R
Subjt:  ETRSDVIPVRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQE-NDARIRGEEIRRSFYIEISVEKIIGKFLDHPVR

P26866 Ribosomal protein S4, mitochondrial2.4e-2042.77Show/hide
Query:  ALRFQTCRLLLGNV-RNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYI----PFPLNPETRSDVIP
        A RF+ CR +L NV + ++LT+ Q+ ++ +L+ +K++ K+  +        IQ QT +KL LF+G+LPI +M R    T YI        N E R DVI 
Subjt:  ALRFQTCRLLLGNV-RNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYI----PFPLNPETRSDVIP

Query:  VRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSF
        VRL+F  T+ QARQ ISH+ +CVN   V+I  F+VS+GDLIS QEN        IR++F
Subjt:  VRLHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSF

Q31708 Ribosomal protein S4, mitochondrial3.0e-15683.76Show/hide
Query:  LPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSI-KRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVR
        L  LRFQTCRLL GNV NRELTIIQRRILR+LRN+KRSI KRKIYP++ L SYIQ QTTRKLP F+GDLPITEMHRGT+RTSYIPF LN ETR DVIP+R
Subjt:  LPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSI-KRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVR

Query:  LHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK
        L+F ETIPQARQ ISHRRVCVNKGMVSITHFK+SHGD+ISFQEN+A IRGEEIRRSFY EI VEKIIGK L  P+RMWRR+KTEWFHLLKTKRGCRLLLK
Subjt:  LHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK

Query:  SRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNS--SLYSNSTYCSASPHQFTMKSKIKR
        SRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEH RMKRNL   KSLFLS R+K KN NLPTRT SPIVYNS  SLYSNSTYC ASPH+ TMK +IKR
Subjt:  SRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNS--SLYSNSTYCSASPHQFTMKSKIKR

Query:  IELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
        IELPTHY EVN+RT KAVV YGPNIGHIPHDIRLKD NL L S NGRGQNI
Subjt:  IELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI

Arabidopsis top hitse value%identityAlignment
AT2G07734.1 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein1.1e-16987.75Show/hide
Query:  LPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSI-KRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVR
        L  LRFQTCRLL GNVRNRELTIIQRRILR+LRN+KRSI KRKIYP++ L SYIQ QTTRKLPLFHGDLPITEMHRGT+RTSYIPFPLNPETR DVIP+R
Subjt:  LPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSI-KRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVR

Query:  LHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK
        LHF ETIPQARQPISHRRVCVNKGMVSITHFK+SHGD+ISFQEN+A IRGEEIRRSFY EISVEKIIGK L  P+RMWRR+KTEWFHLLKTKRGCRLLLK
Subjt:  LHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK

Query:  SRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNS--SLYSNSTYCSASPHQFTMKSKIKR
        SRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEH RMKRNL   KSLFLS R+K KN NLPTRT SPIVYNS  SLYSNSTYC ASPH+ TMK +IKR
Subjt:  SRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNS--SLYSNSTYCSASPHQFTMKSKIKR

Query:  IELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
        IELPTHYSEVNHRT KAVVSYGPNIGHIPHDIRLKDPNLPLRS NGRGQNI
Subjt:  IELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI

ATMG00290.1 mitochondrial ribosomal protein S41.1e-16987.75Show/hide
Query:  LPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSI-KRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVR
        L  LRFQTCRLL GNVRNRELTIIQRRILR+LRN+KRSI KRKIYP++ L SYIQ QTTRKLPLFHGDLPITEMHRGT+RTSYIPFPLNPETR DVIP+R
Subjt:  LPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSI-KRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVR

Query:  LHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK
        LHF ETIPQARQPISHRRVCVNKGMVSITHFK+SHGD+ISFQEN+A IRGEEIRRSFY EISVEKIIGK L  P+RMWRR+KTEWFHLLKTKRGCRLLLK
Subjt:  LHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLK

Query:  SRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNS--SLYSNSTYCSASPHQFTMKSKIKR
        SRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEH RMKRNL   KSLFLS R+K KN NLPTRT SPIVYNS  SLYSNSTYC ASPH+ TMK +IKR
Subjt:  SRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNS--SLYSNSTYCSASPHQFTMKSKIKR

Query:  IELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI
        IELPTHYSEVNHRT KAVVSYGPNIGHIPHDIRLKDPNLPLRS NGRGQNI
Subjt:  IELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKDPNLPLRSGNGRGQNI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGGCGAAAAAGACTGATTCAACAAGATATGCCTTGCCTGCATTAAGATTTCAAACTTGTCGTCTACTTTTAGGAAATGTTCGGAACAGAGAACTTACAATAATACAACG
CCGCATTCTCCGAAAATTGAGAAACAAGAAGAGATCTATTAAGAGAAAGATTTATCCGAGAGAAAATCTTAACAGTTACATCCAATCACAAACTACACGAAAGTTGCCCC
TTTTTCATGGGGATTTACCCATCACAGAGATGCACAGAGGAACAGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGT
CTCCATTTTAGTGAAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGTAAGCATTACTCATTTTAAAGTGTCCCACGGTGA
TCTAATATCTTTTCAAGAAAATGACGCGAGAATCCGCGGTGAAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGAAAAAATCATAGGAAAATTCCTGGATCACC
CGGTAAGAATGTGGAGAAGAACTAAAACAGAATGGTTCCACCTACTCAAAACTAAGAGGGGATGCCGCCTACTACTAAAATCCCGGTTTTTGCAACAGTTGCGTTCTTCT
ATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCGGAAAAAGTATGCTTAGGCAGTTCCTTCGCTGAGCACAACAGAATGAAGAGGAATTTGTATCATTTTAA
ATCCCTATTCTTATCGAATAGAAAAAAAAAAAAAAACCGAAATCTTCCTACTCGAACAAGAAGTCCTATAGTTTACAACTCTTCTTTATATAGTAATTCGACCTATTGCT
CCGCATCCCCCCATCAGTTTACTATGAAGAGCAAAATCAAAAGGATCGAACTACCTACTCATTATTCGGAGGTGAATCATAGAACACTAAAAGCTGTGGTATCTTATGGA
CCTAACATAGGTCACATCCCTCACGACATAAGATTGAAAGATCCAAACCTTCCTCTTCGGAGCGGAAACGGACGTGGCCAAAACATA
mRNA sequenceShow/hide mRNA sequence
GTGGCGAAAAAGACTGATTCAACAAGATATGCCTTGCCTGCATTAAGATTTCAAACTTGTCGTCTACTTTTAGGAAATGTTCGGAACAGAGAACTTACAATAATACAACG
CCGCATTCTCCGAAAATTGAGAAACAAGAAGAGATCTATTAAGAGAAAGATTTATCCGAGAGAAAATCTTAACAGTTACATCCAATCACAAACTACACGAAAGTTGCCCC
TTTTTCATGGGGATTTACCCATCACAGAGATGCACAGAGGAACAGAACGAACTTCTTATATCCCTTTTCCACTCAATCCAGAAACAAGATCGGACGTTATTCCGGTTCGT
CTCCATTTTAGTGAAACTATTCCTCAAGCAAGGCAGCCGATAAGTCATCGAAGGGTTTGTGTGAATAAAGGAATGGTAAGCATTACTCATTTTAAAGTGTCCCACGGTGA
TCTAATATCTTTTCAAGAAAATGACGCGAGAATCCGCGGTGAAGAAATAAGGAGATCTTTCTATATCGAAATATCAGTTGAAAAAATCATAGGAAAATTCCTGGATCACC
CGGTAAGAATGTGGAGAAGAACTAAAACAGAATGGTTCCACCTACTCAAAACTAAGAGGGGATGCCGCCTACTACTAAAATCCCGGTTTTTGCAACAGTTGCGTTCTTCT
ATGCAAGAAGAAGACTTAGAAAGAACAAAGAAGTTTGGATCGGAAAAAGTATGCTTAGGCAGTTCCTTCGCTGAGCACAACAGAATGAAGAGGAATTTGTATCATTTTAA
ATCCCTATTCTTATCGAATAGAAAAAAAAAAAAAAACCGAAATCTTCCTACTCGAACAAGAAGTCCTATAGTTTACAACTCTTCTTTATATAGTAATTCGACCTATTGCT
CCGCATCCCCCCATCAGTTTACTATGAAGAGCAAAATCAAAAGGATCGAACTACCTACTCATTATTCGGAGGTGAATCATAGAACACTAAAAGCTGTGGTATCTTATGGA
CCTAACATAGGTCACATCCCTCACGACATAAGATTGAAAGATCCAAACCTTCCTCTTCGGAGCGGAAACGGACGTGGCCAAAACATA
Protein sequenceShow/hide protein sequence
VAKKTDSTRYALPALRFQTCRLLLGNVRNRELTIIQRRILRKLRNKKRSIKRKIYPRENLNSYIQSQTTRKLPLFHGDLPITEMHRGTERTSYIPFPLNPETRSDVIPVR
LHFSETIPQARQPISHRRVCVNKGMVSITHFKVSHGDLISFQENDARIRGEEIRRSFYIEISVEKIIGKFLDHPVRMWRRTKTEWFHLLKTKRGCRLLLKSRFLQQLRSS
MQEEDLERTKKFGSEKVCLGSSFAEHNRMKRNLYHFKSLFLSNRKKKKNRNLPTRTRSPIVYNSSLYSNSTYCSASPHQFTMKSKIKRIELPTHYSEVNHRTLKAVVSYG
PNIGHIPHDIRLKDPNLPLRSGNGRGQNI