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MS022873 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS022873
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold29:270003..270128
RNA-Seq ExpressionMS022873
SyntenyMS022873
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KJB09756.1 hypothetical protein B456_001G162300 [Gossypium raimondii]1.0e-0471.05Show/hide
Query:  TSPPPLCTFSSVWGKGRPLLLLLTKGEQPALQANREPP
        T P P     ++WGKGRPLLLLLTK EQPALQAN EPP
Subjt:  TSPPPLCTFSSVWGKGRPLLLLLTKGEQPALQANREPP
NP_178792.3 hypothetical protein AT2G07706 [Arabidopsis thaliana]7.0e-0669.05Show/hide
Query:  LLTFTSPPPLCTFSSVWGKGRPLLLLLTKGEQPALQANREPP
        LL   + P   +   VWGKGRPLLLLLTK EQPALQANREPP
Subjt:  LLTFTSPPPLCTFSSVWGKGRPLLLLLTKGEQPALQANREPP
XP_027177652.1 (R)-mandelonitrile lyase-like [Coffea eugenioides]1.3e-0480.65Show/hide
Query:  TFSSVWGKGRPLLLLLTKGEQPALQANREPP
        T   +WGK RPLLLLLTKGE PALQANREPP
Subjt:  TFSSVWGKGRPLLLLLTKGEQPALQANREPP
TrEMBL top hitse value%identityAlignment
A0A0D2PZN2 Uncharacterized protein4.9e-0571.05Show/hide
Query:  TSPPPLCTFSSVWGKGRPLLLLLTKGEQPALQANREPP
        T P P     ++WGKGRPLLLLLTK EQPALQAN EPP
Subjt:  TSPPPLCTFSSVWGKGRPLLLLLTKGEQPALQANREPP
A0A654GF83 Uncharacterized protein3.4e-0669.05Show/hide
Query:  LLTFTSPPPLCTFSSVWGKGRPLLLLLTKGEQPALQANREPP
        LL   + P   +   VWGKGRPLLLLLTK EQPALQANREPP
Subjt:  LLTFTSPPPLCTFSSVWGKGRPLLLLLTKGEQPALQANREPP
F4IMC1 Uncharacterized protein3.4e-0669.05Show/hide
Query:  LLTFTSPPPLCTFSSVWGKGRPLLLLLTKGEQPALQANREPP
        LL   + P   +   VWGKGRPLLLLLTK EQPALQANREPP
Subjt:  LLTFTSPPPLCTFSSVWGKGRPLLLLLTKGEQPALQANREPP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G07706.1 unknown protein6.5e-1069.05Show/hide
Query:  LLTFTSPPPLCTFSSVWGKGRPLLLLLTKGEQPALQANREPP
        LL   + P   +   VWGKGRPLLLLLTK EQPALQANREPP
Subjt:  LLTFTSPPPLCTFSSVWGKGRPLLLLLTKGEQPALQANREPP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCCTGACTTTCACAAGTCCCCCCCCCTTATGTACTTTTTCTTCAGTGTGGGGCAAAGGGCGCCCTCTACTTCTACTTCTAACTAAAGGCGAACAGCCGGCATTGCAAGC
AAATAGAGAGCCCCCG
mRNA sequenceShow/hide mRNA sequence
CTCCTGACTTTCACAAGTCCCCCCCCCTTATGTACTTTTTCTTCAGTGTGGGGCAAAGGGCGCCCTCTACTTCTACTTCTAACTAAAGGCGAACAGCCGGCATTGCAAGC
AAATAGAGAGCCCCCG
Protein sequenceShow/hide protein sequence
LLTFTSPPPLCTFSSVWGKGRPLLLLLTKGEQPALQANREPP