CuGenDBv2

Gene ID	MS022988
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Growth-regulating factor
Genome location	scaffold357:365567..366151
RNA-Seq Expression	MS022988
Synteny	MS022988
Gene Ontology terms	GO:0006351 - transcription, DNA-templated (biological process) GO:0032502 - developmental process (biological process) GO:0005634 - nucleus (cellular component) GO:0005524 - ATP binding (molecular function)
InterPro domains	IPR014977 - WRC domain IPR031137 - Growth-regulating factor

Homology

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GenBank top hits

e value

%identity

Alignment

TYK25390.1 WRC domain-containing protein [Cucumis melo var. makuwa]

3.8e-46

56.88

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Query:  GKWCEREKAFPLKKRRGSFERPT--ELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS
        G+WCE+EKAFPLKKRRGSFER +  + DD+ ++I  A     + ++  M  TKMNKK   +     QKQ    SKVG ++ V GKKRSRGGALMEGSRCS
Subjt:  GKWCEREKAFPLKKRRGSFERPT--ELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS

Query:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAA------------PKKEQPL------PPPPLTPASKKRSVKLGLVKARSISSLLGQTDN
        RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS+N VR RS AA             KK  P       PPP     + K+ +KLG+VKARSISSLLGQ D 
Subjt:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAA------------PKKEQPL------PPPPLTPASKKRSVKLGLVKARSISSLLGQTDN

Query:  VMAAPLYPLP---HDDDV
        ++A PL  LP   HDD++
Subjt:  VMAAPLYPLP---HDDDV

XP_008443038.1 PREDICTED: uncharacterized protein LOC103486754 isoform X2 [Cucumis melo]

3.8e-46

56.88

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Query:  GKWCEREKAFPLKKRRGSFERPT--ELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS
        G+WCE+EKAFPLKKRRGSFER +  + DD+ ++I  A     + ++  M  TKMNKK   +     QKQ    SKVG ++ V GKKRSRGGALMEGSRCS
Subjt:  GKWCEREKAFPLKKRRGSFERPT--ELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS

Query:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAA------------PKKEQPL------PPPPLTPASKKRSVKLGLVKARSISSLLGQTDN
        RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS+N VR RS AA             KK  P       PPP     + K+ +KLG+VKARSISSLLGQ D 
Subjt:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAA------------PKKEQPL------PPPPLTPASKKRSVKLGLVKARSISSLLGQTDN

Query:  VMAAPLYPLP---HDDDV
        ++A PL  LP   HDD++
Subjt:  VMAAPLYPLP---HDDDV

XP_022151363.1 uncharacterized protein LOC111019324 isoform X1 [Momordica charantia]

5.8e-103

99.49

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Query:  GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV
        GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV
Subjt:  GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV

Query:  NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGLVKARSISSLLGQTDNVMAAPLYPLPHDDDV
        NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLG+VKARSISSLLGQTDNVMAAPLYPLPHDDDV
Subjt:  NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGLVKARSISSLLGQTDNVMAAPLYPLPHDDDV

XP_022151364.1 uncharacterized protein LOC111019324 isoform X2 [Momordica charantia]

5.8e-103

99.49

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Query:  GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV
        GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV
Subjt:  GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV

Query:  NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGLVKARSISSLLGQTDNVMAAPLYPLPHDDDV
        NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLG+VKARSISSLLGQTDNVMAAPLYPLPHDDDV
Subjt:  NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGLVKARSISSLLGQTDNVMAAPLYPLPHDDDV

XP_038903168.1 uncharacterized protein LOC120089834 [Benincasa hispida]

2.0e-47

57.71

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Query:  GKWCEREKAFPLKKRRGSFERP-TELDDNKE-------EITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALM
        G+WCEREKAFPLKKRRGSFER   + DDN E       ++ T ++ +++ ++     TKMNKK +T SS   QKQ    +K+G  L + GKKRSRGGALM
Subjt:  GKWCEREKAFPLKKRRGSFERP-TELDDNKE-------EITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALM

Query:  EGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAA----PK------------KEQPLPPPP---LTPASKKRSVKLGLVKARSISS
        EGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS+N VR RS AA    PK               P P PP   LT ASKKR +KLG+VKARSISS
Subjt:  EGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAA----PK------------KEQPLPPPP---LTPASKKRSVKLGLVKARSISS

Query:  LLGQTDNVMAAPLYPLP-----HDDDV
        LLGQ D ++A P  P P     HDD++
Subjt:  LLGQTDNVMAAPLYPLP-----HDDDV

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B737 Growth-regulating factor

1.8e-46

56.88

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Query:  GKWCEREKAFPLKKRRGSFERPT--ELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS
        G+WCE+EKAFPLKKRRGSFER +  + DD+ ++I  A     + ++  M  TKMNKK   +     QKQ    SKVG ++ V GKKRSRGGALMEGSRCS
Subjt:  GKWCEREKAFPLKKRRGSFERPT--ELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS

Query:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAA------------PKKEQPL------PPPPLTPASKKRSVKLGLVKARSISSLLGQTDN
        RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS+N VR RS AA             KK  P       PPP     + K+ +KLG+VKARSISSLLGQ D 
Subjt:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAA------------PKKEQPL------PPPPLTPASKKRSVKLGLVKARSISSLLGQTDN

Query:  VMAAPLYPLP---HDDDV
        ++A PL  LP   HDD++
Subjt:  VMAAPLYPLP---HDDDV

A0A5A7TKD1 Growth-regulating factor

1.8e-46

56.88

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Query:  GKWCEREKAFPLKKRRGSFERPT--ELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS
        G+WCE+EKAFPLKKRRGSFER +  + DD+ ++I  A     + ++  M  TKMNKK   +     QKQ    SKVG ++ V GKKRSRGGALMEGSRCS
Subjt:  GKWCEREKAFPLKKRRGSFERPT--ELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS

Query:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAA------------PKKEQPL------PPPPLTPASKKRSVKLGLVKARSISSLLGQTDN
        RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS+N VR RS AA             KK  P       PPP     + K+ +KLG+VKARSISSLLGQ D 
Subjt:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAA------------PKKEQPL------PPPPLTPASKKRSVKLGLVKARSISSLLGQTDN

Query:  VMAAPLYPLP---HDDDV
        ++A PL  LP   HDD++
Subjt:  VMAAPLYPLP---HDDDV

A0A5D3DQ51 Growth-regulating factor

1.8e-46

56.88

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Query:  GKWCEREKAFPLKKRRGSFERPT--ELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS
        G+WCE+EKAFPLKKRRGSFER +  + DD+ ++I  A     + ++  M  TKMNKK   +     QKQ    SKVG ++ V GKKRSRGGALMEGSRCS
Subjt:  GKWCEREKAFPLKKRRGSFERPT--ELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCS

Query:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAA------------PKKEQPL------PPPPLTPASKKRSVKLGLVKARSISSLLGQTDN
        RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS+N VR RS AA             KK  P       PPP     + K+ +KLG+VKARSISSLLGQ D 
Subjt:  RVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAA------------PKKEQPL------PPPPLTPASKKRSVKLGLVKARSISSLLGQTDN

Query:  VMAAPLYPLP---HDDDV
        ++A PL  LP   HDD++
Subjt:  VMAAPLYPLP---HDDDV

A0A6J1DBZ7 Growth-regulating factor

2.8e-103

99.49

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Query:  GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV
        GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV
Subjt:  GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV

Query:  NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGLVKARSISSLLGQTDNVMAAPLYPLPHDDDV
        NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLG+VKARSISSLLGQTDNVMAAPLYPLPHDDDV
Subjt:  NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGLVKARSISSLLGQTDNVMAAPLYPLPHDDDV

A0A6J1DCV6 Growth-regulating factor

2.8e-103

99.49

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Query:  GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV
        GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV
Subjt:  GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRV

Query:  NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGLVKARSISSLLGQTDNVMAAPLYPLPHDDDV
        NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLG+VKARSISSLLGQTDNVMAAPLYPLPHDDDV
Subjt:  NGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGLVKARSISSLLGQTDNVMAAPLYPLPHDDDV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G42040.1 CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

2.7e-26

51.82

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Query:  KNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSR--GGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAP
        + N K   + K+    +    + +E EE+  G      GKK+++  GG L EGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGR+RS+N    +S    
Subjt:  KNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSR--GGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSINTVRRRSAAAP

Query:  KKEQPLPPPPLTPASKKRSVKLGLVKARSISSLLGQT
          E+      +    KK+ VKLG+VKARSISSLLGQT
Subjt:  KKEQPLPPPPLTPASKKRSVKLGLVKARSISSLLGQT

AT5G53660.1 growth-regulating factor 7

3.8e-04

42.11

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Query:  MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS
        +E  RC R +G+ WRC ++ +  +  CE HL +GR RS
Subjt:  MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRS

Sequences

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CDS sequence

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GGGAAGTGGTGCGAGAGGGAGAAGGCATTTCCATTAAAGAAGAGACGAGGGAGCTTCGAGAGGCCAACGGAATTAGATGACAACAAAGAAGAAATCACGACGGCCAACTC
GCCGGAGATGATAATCAACAAGAACAACATGAAGGCGACGAAGATGAACAAGAAATACGCCACCACGTCATCGCCGCCGCAGCAGAAGCAAGAACCCGAGGAATCCAAGG
TGGGTCCGGAGCTCGCCGTCGCCGGGAAGAAGCGGTCGAGAGGCGGCGCGTTAATGGAGGGATCTCGGTGCAGCCGCGTCAACGGCAGAGGATGGCGCTGCTGCCAGCAG
ACGCTCGTCGGCTACTCCCTCTGCGAACATCACTTGGGAAAAGGACGCCTCCGCAGCATCAATACCGTCCGCCGCCGCTCCGCCGCAGCGCCCAAGAAGGAGCAGCCCCT
CCCGCCGCCGCCGTTGACGCCGGCCAGTAAGAAGAGATCAGTGAAGCTGGGTTTGGTCAAAGCCAGGTCCATAAGTAGCTTGCTCGGTCAAACTGACAACGTCATGGCGG
CGCCGCTGTATCCGCTGCCTCATGACGACGACGTA

mRNA sequence

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Protein sequence

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GKWCEREKAFPLKKRRGSFERPTELDDNKEEITTANSPEMIINKNNMKATKMNKKYATTSSPPQQKQEPEESKVGPELAVAGKKRSRGGALMEGSRCSRVNGRGWRCCQQ
TLVGYSLCEHHLGKGRLRSINTVRRRSAAAPKKEQPLPPPPLTPASKKRSVKLGLVKARSISSLLGQTDNVMAAPLYPLPHDDDV

MS022988 (gene) of Bitter gourd (TR) v1 genome