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MS023000 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023000
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold357:446087..446401
RNA-Seq ExpressionMS023000
SyntenyMS023000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443054.1 PREDICTED: uncharacterized protein LOC103486764 [Cucumis melo]9.6e-2059.32Show/hide
Query:  MDSSIVVNSSVQHVTKKSSDELLRKFAEVGA--------VAVVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGR-----NKFGIGNGRSQ
        MDSSI    +VQHV +KSSDELLRKFAEVG+        + VVK RR+     R N E+C+SP     GGGVVER+ LI   GR      K GIGNGRSQ
Subjt:  MDSSIVVNSSVQHVTKKSSDELLRKFAEVGA--------VAVVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGR-----NKFGIGNGRSQ

Query:  PLRVRDFRNKSILGAIQK
         LR+RDFRNKSILGAIQK
Subjt:  PLRVRDFRNKSILGAIQK

XP_022158341.1 uncharacterized protein LOC111024849 [Momordica charantia]2.9e-4899.05Show/hide
Query:  MDSSIVVNSSVQHVTKKSSDELLRKFAEVGAVAVVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGRNKFGIGNGRSQPLRVRDFRNKSIL
        MDSSIVVNSSVQHVTKKSSDELLRKFAEVGAVAV KPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGRNKFGIGNGRSQPLRVRDFRNKSIL
Subjt:  MDSSIVVNSSVQHVTKKSSDELLRKFAEVGAVAVVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGRNKFGIGNGRSQPLRVRDFRNKSIL

Query:  GAIQK
        GAIQK
Subjt:  GAIQK

XP_022935142.1 uncharacterized protein LOC111442101 [Cucurbita moschata]2.8e-1956.78Show/hide
Query:  SSIVVNSSVQHVTKKSSDELLRKFAEVGAVA--------VVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGRNK-------FGIGNGRSQ
        SS+ VN SVQHV +KSSD+LL+KFAEVG+ +        VVK RRRR        E+CESP     GGGVVER+ LIP AGR          G G+GRSQ
Subjt:  SSIVVNSSVQHVTKKSSDELLRKFAEVGAVA--------VVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGRNK-------FGIGNGRSQ

Query:  PLRVRDFRNKSILGAIQK
         LR+RDFRNKS LGAIQK
Subjt:  PLRVRDFRNKSILGAIQK

XP_022983155.1 uncharacterized protein LOC111481793 [Cucurbita maxima]4.8e-1956.78Show/hide
Query:  SSIVVNSSVQHVTKKSSDELLRKFAEVGAVA--------VVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGRNK-------FGIGNGRSQ
        SS+ VN SVQHV +KSSD+LL+KFAEVG+ +        VVK RRRR        E+CESP     GGGVVER+ LIP AGR          G G+GRSQ
Subjt:  SSIVVNSSVQHVTKKSSDELLRKFAEVGAVA--------VVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGRNK-------FGIGNGRSQ

Query:  PLRVRDFRNKSILGAIQK
         LR+RDFRNKS LGAIQK
Subjt:  PLRVRDFRNKSILGAIQK

XP_023526943.1 uncharacterized protein LOC111790316 [Cucurbita pepo subsp. pepo]4.8e-1956.78Show/hide
Query:  SSIVVNSSVQHVTKKSSDELLRKFAEVGAVA--------VVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGRNK-------FGIGNGRSQ
        SS+ VN SVQHV +KSSD+LL+KFAEVG+ +        VVK RRRR        E+CESP     GGGVVER+ LIP AGR          G G+GRSQ
Subjt:  SSIVVNSSVQHVTKKSSDELLRKFAEVGAVA--------VVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGRNK-------FGIGNGRSQ

Query:  PLRVRDFRNKSILGAIQK
         LR+RDFRNKS LGAIQK
Subjt:  PLRVRDFRNKSILGAIQK

TrEMBL top hitse value%identityAlignment
A0A1S3B7W3 uncharacterized protein LOC1034867644.6e-2059.32Show/hide
Query:  MDSSIVVNSSVQHVTKKSSDELLRKFAEVGA--------VAVVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGR-----NKFGIGNGRSQ
        MDSSI    +VQHV +KSSDELLRKFAEVG+        + VVK RR+     R N E+C+SP     GGGVVER+ LI   GR      K GIGNGRSQ
Subjt:  MDSSIVVNSSVQHVTKKSSDELLRKFAEVGA--------VAVVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGR-----NKFGIGNGRSQ

Query:  PLRVRDFRNKSILGAIQK
         LR+RDFRNKSILGAIQK
Subjt:  PLRVRDFRNKSILGAIQK

A0A5A7TJU8 Uncharacterized protein4.6e-2059.32Show/hide
Query:  MDSSIVVNSSVQHVTKKSSDELLRKFAEVGA--------VAVVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGR-----NKFGIGNGRSQ
        MDSSI    +VQHV +KSSDELLRKFAEVG+        + VVK RR+     R N E+C+SP     GGGVVER+ LI   GR      K GIGNGRSQ
Subjt:  MDSSIVVNSSVQHVTKKSSDELLRKFAEVGA--------VAVVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGR-----NKFGIGNGRSQ

Query:  PLRVRDFRNKSILGAIQK
         LR+RDFRNKSILGAIQK
Subjt:  PLRVRDFRNKSILGAIQK

A0A6J1E0N1 uncharacterized protein LOC1110248491.4e-4899.05Show/hide
Query:  MDSSIVVNSSVQHVTKKSSDELLRKFAEVGAVAVVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGRNKFGIGNGRSQPLRVRDFRNKSIL
        MDSSIVVNSSVQHVTKKSSDELLRKFAEVGAVAV KPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGRNKFGIGNGRSQPLRVRDFRNKSIL
Subjt:  MDSSIVVNSSVQHVTKKSSDELLRKFAEVGAVAVVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGRNKFGIGNGRSQPLRVRDFRNKSIL

Query:  GAIQK
        GAIQK
Subjt:  GAIQK

A0A6J1F4R1 uncharacterized protein LOC1114421011.3e-1956.78Show/hide
Query:  SSIVVNSSVQHVTKKSSDELLRKFAEVGAVA--------VVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGRNK-------FGIGNGRSQ
        SS+ VN SVQHV +KSSD+LL+KFAEVG+ +        VVK RRRR        E+CESP     GGGVVER+ LIP AGR          G G+GRSQ
Subjt:  SSIVVNSSVQHVTKKSSDELLRKFAEVGAVA--------VVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGRNK-------FGIGNGRSQ

Query:  PLRVRDFRNKSILGAIQK
         LR+RDFRNKS LGAIQK
Subjt:  PLRVRDFRNKSILGAIQK

A0A6J1J4Z4 uncharacterized protein LOC1114817932.3e-1956.78Show/hide
Query:  SSIVVNSSVQHVTKKSSDELLRKFAEVGAVA--------VVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGRNK-------FGIGNGRSQ
        SS+ VN SVQHV +KSSD+LL+KFAEVG+ +        VVK RRRR        E+CESP     GGGVVER+ LIP AGR          G G+GRSQ
Subjt:  SSIVVNSSVQHVTKKSSDELLRKFAEVGAVA--------VVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGRNK-------FGIGNGRSQ

Query:  PLRVRDFRNKSILGAIQK
         LR+RDFRNKS LGAIQK
Subjt:  PLRVRDFRNKSILGAIQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTTCGATTGTGGTTAATAGCAGCGTTCAGCACGTGACGAAGAAGTCCTCCGACGAGCTGCTGAGGAAATTTGCTGAAGTGGGGGCGGTGGCGGTGGTGAAGCC
GCGGCGGAGGAGGGGCCGGATTGTGAGGGAAAATATTGAGCAGTGCGAGAGCCCTGTTGGCGGCGTTGGCGGCGGCGGAGTTGTTGAGCGGCGGCGGCTGATTCCGGCGG
CGGGGAGGAACAAATTTGGTATTGGAAATGGAAGGTCTCAGCCGCTGAGGGTTAGGGATTTCAGAAACAAGTCTATCCTTGGAGCCATTCAAAAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTCTTCGATTGTGGTTAATAGCAGCGTTCAGCACGTGACGAAGAAGTCCTCCGACGAGCTGCTGAGGAAATTTGCTGAAGTGGGGGCGGTGGCGGTGGTGAAGCC
GCGGCGGAGGAGGGGCCGGATTGTGAGGGAAAATATTGAGCAGTGCGAGAGCCCTGTTGGCGGCGTTGGCGGCGGCGGAGTTGTTGAGCGGCGGCGGCTGATTCCGGCGG
CGGGGAGGAACAAATTTGGTATTGGAAATGGAAGGTCTCAGCCGCTGAGGGTTAGGGATTTCAGAAACAAGTCTATCCTTGGAGCCATTCAAAAG
Protein sequenceShow/hide protein sequence
MDSSIVVNSSVQHVTKKSSDELLRKFAEVGAVAVVKPRRRRGRIVRENIEQCESPVGGVGGGGVVERRRLIPAAGRNKFGIGNGRSQPLRVRDFRNKSILGAIQK