CuGenDBv2

Gene ID	MS023004
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ATP synthase subunit b, chloroplastic
Genome location	scaffold357:471367..471589
RNA-Seq Expression	MS023004
Synteny	MS023004
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

CAA9893319.1 unnamed protein product [Spirodela intermedia]

1.2e-08

61.97

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Query:  EAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKMELFVLNNTERLIKY
        +A  +QLEKAR+R RKVE +A++++  G YSEIEREK NLIN +TS NL++LEN K E  +LNN ERLIKY
Subjt:  EAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKMELFVLNNTERLIKY

EFH63128.1 ATP synthase CF0 B subunit [Arabidopsis lyrata subsp. lyrata]

1.3e-07

64.38

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Query:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKMELFVLNNTERLIK
        L E AI +QLE AR+R RKVEM+ADQF+  G YSEIEREK NLIN S  K L+QLEN K E  +L+N E+LIK
Subjt:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKMELFVLNNTERLIK

PIA34348.1 hypothetical protein AQUCO_03800145v1 [Aquilegia coerulea]

2.3e-07

61.64

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Query:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKMELFVLNNTERLIK
        L E AI+K LEKA++R RK +M+AD+F+    YSEIEREK NLINSS  +NL++LEN K E   LNN ERLIK
Subjt:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKMELFVLNNTERLIK

YP_009439877.1 ATP synthase CF0 B subunit [Gynostemma caulopterum]

2.9e-07

72.13

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Query:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME
        L E A++ QLEKARSR RKVEM+ADQF+  G YSEIEREK NLIN STSK+L+QLEN K E
Subjt:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME

YP_009440143.1 ATP synthase CF0 B subunit [Gynostemma longipes]

2.9e-07

73.77

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Query:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME
        L E AI+ QLEKARSR RKVEM+ADQF+  G YSEIEREK NLIN STSK+L+QLEN K E
Subjt:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME

TrEMBL top hits

e value

%identity

Alignment

A0A191T450 ATP synthase subunit b, chloroplastic

1.4e-07

73.77

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Query:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME
        L E AI+ QLEKARSR RKVEM+ADQF+  G YSEIEREK NLIN STSK+L+QLEN K E
Subjt:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME

A0A291IB21 ATP synthase subunit b, chloroplastic

1.4e-07

73.77

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Query:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME
        L E AI+ QLEKARSR RKVEM+ADQF+  G YSEIEREK NLIN STSK+L+QLEN K E
Subjt:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME

A0A2G5CSU5 Uncharacterized protein

1.1e-07

61.64

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Query:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKMELFVLNNTERLIK
        L E AI+K LEKA++R RK +M+AD+F+    YSEIEREK NLINSS  +NL++LEN K E   LNN ERLIK
Subjt:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKMELFVLNNTERLIK

A0A2L0WR24 ATP synthase subunit b, chloroplastic

1.4e-07

72.13

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Query:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME
        L E A++ QLEKARSR RKVEM+ADQF+  G YSEIEREK NLIN STSK+L+QLEN K E
Subjt:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME

D7KRC8 ATP synthase CF0 B subunit

6.4e-08

64.38

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Query:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKMELFVLNNTERLIK
        L E AI +QLE AR+R RKVEM+ADQF+  G YSEIEREK NLIN S  K L+QLEN K E  +L+N E+LIK
Subjt:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKMELFVLNNTERLIK

SwissProt top hits

e value

%identity

Alignment

B1A921 ATP synthase subunit b, chloroplastic

9.5e-09

68.85

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Query:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME
        L + AI+ QLEKAR+R RKVEM+A+QF+  G YSEIEREK NLIN STSK L+QLEN K E
Subjt:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME

B1NWD6 ATP synthase subunit b, chloroplastic

1.2e-08

68.85

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Query:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME
        L E AI+ QLEKAR+R RKVE++ADQF+  G YSEIEREK NLIN ST K L+QLEN K E
Subjt:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME

Q09X31 ATP synthase subunit b, chloroplastic

4.3e-09

70.49

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Query:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME
        L E A++ QLEKARSR RKVE +ADQF+  G YSEIEREK NLIN STSK L+QLEN K E
Subjt:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME

Q4VZP7 ATP synthase subunit b, chloroplastic

1.9e-09

74.07

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Query:  KQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME
        +QLEKAR+R RKVEM+ADQF+  G YSEIEREK NLIN STSK+L+QLEN K E
Subjt:  KQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME

Q68S20 ATP synthase subunit b, chloroplastic

7.3e-09

70.49

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Query:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME
        L E AI+ QLEKAR+R RKVEM+ADQF+  G YSEIEREK N IN STSK L QLEN K E
Subjt:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME

Arabidopsis top hits

e value

%identity

Alignment

ATCG00130.1 ATPase, F0 complex, subunit B/B', bacterial/chloroplast

1.4e-07

63.93

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Query:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME
        L E AI +QLE AR+R R VE +AD+F+  G YSEIEREK NLIN ST K L+QLEN K E
Subjt:  LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKME

Sequences

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CDS sequence

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CTTCATGAGGAGGCAATTGACAAACAACTAGAAAAAGCTCGGTCTCGTTCACGAAAAGTCGAGATGGATGCTGATCAATTTCAAGAGAAAGGACGATACTCTGAAATAGA
ACGAGAAAAAACGAATTTGATTAACTCATCAACTTCTAAAAATTTGCAACAATTAGAAAATAAAAAAATGGAACTATTCGTTTTGAATAACACAGAGCGATTAATCAAGT
AT

mRNA sequence

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Protein sequence

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LHEEAIDKQLEKARSRSRKVEMDADQFQEKGRYSEIEREKTNLINSSTSKNLQQLENKKMELFVLNNTERLIKY

MS023004 (gene) of Bitter gourd (TR) v1 genome