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MS023007 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023007
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description11 kDa late embryogenesis abundant protein-like
Genome locationscaffold357:498623..498832
RNA-Seq ExpressionMS023007
SyntenyMS023007
Gene Ontology termsGO:0006950 - response to stress (biological process)
GO:0009628 - response to abiotic stimulus (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158338.1 11 kDa late embryogenesis abundant protein-like [Momordica charantia]1.4e-1991.43Show/hide
Query:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGTGVGPTTGT
        +VDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQA    GTGT AGLATGTGTGVGPTTGT
Subjt:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGTGVGPTTGT

XP_022940345.1 11 kDa late embryogenesis abundant protein-like [Cucurbita moschata]6.0e-1064.86Show/hide
Query:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGTGVG-----PTTG
        +VDKMRAHDP+EKDMA  RKEER+  AE++KQQARA HA ERQA   + TG H GL TGTGTG G     PT G
Subjt:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGTGVG-----PTTG

XP_022971427.1 11 kDa late embryogenesis abundant protein-like [Cucurbita maxima]3.0e-0967.14Show/hide
Query:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGT-GVGPTTG
        +VDKMRAHDP+EKDMA  RKEER+  AE++KQQARA HAAERQA   + TG H GL TGTGT    PT G
Subjt:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGT-GVGPTTG

XP_031737964.1 11 kDa late embryogenesis abundant protein-like [Cucumis sativus]7.8e-1069.57Show/hide
Query:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGTGVGPTTG
        +VDKMRAHDP EKDMA  RK+ERI EAE++KQQAR  HAAERQ  TGTG GT  GL TGT T   PT G
Subjt:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGTGVGPTTG

XP_038905932.1 11 kDa late embryogenesis abundant protein-like [Benincasa hispida]7.6e-1373.53Show/hide
Query:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGTGVGPTT
        +VDKMRAHDP+EKDMA  RKEERI EAE++KQQARA HAA+RQ  TGTG GT  GL TGTGTG G  T
Subjt:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGTGVGPTT

TrEMBL top hitse value%identityAlignment
A0A0A0LBV1 Uncharacterized protein3.8e-1069.57Show/hide
Query:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGTGVGPTTG
        +VDKMRAHDP EKDMA  RK+ERI EAE++KQQAR  HAAERQ  TGTG GT  GL TGT T   PT G
Subjt:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGTGVGPTTG

A0A5D3DPJ3 18 kDa seed maturation protein1.9e-0966.18Show/hide
Query:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGTGVGPTT
        +VDKMRAHDP EK+M   +K+ERI EA+++KQQAR  HAAERQAGTG GT T  GL TGTG    PTT
Subjt:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGTGVGPTT

A0A6J1DVT9 11 kDa late embryogenesis abundant protein-like6.9e-2091.43Show/hide
Query:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGTGVGPTTGT
        +VDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQA    GTGT AGLATGTGTGVGPTTGT
Subjt:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGTGVGPTTGT

A0A6J1FQA5 11 kDa late embryogenesis abundant protein-like2.9e-1064.86Show/hide
Query:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGTGVG-----PTTG
        +VDKMRAHDP+EKDMA  RKEER+  AE++KQQARA HA ERQA   + TG H GL TGTGTG G     PT G
Subjt:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGTGVG-----PTTG

A0A6J1I1X4 11 kDa late embryogenesis abundant protein-like1.4e-0967.14Show/hide
Query:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGT-GVGPTTG
        +VDKMRAHDP+EKDMA  RKEER+  AE++KQQARA HAAERQA   + TG H GL TGTGT    PT G
Subjt:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGT-GVGPTTG

SwissProt top hitse value%identityAlignment
P46515 11 kDa late embryogenesis abundant protein7.9e-0551.52Show/hide
Query:  DKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATG-----TGTG
        +KM AHDP++K+MA  +KEER  EAE  KQ A+  +AA++Q  TG GTGTH+   T      TGTG
Subjt:  DKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATG-----TGTG

Q00747 Protein LE251.8e-0445.16Show/hide
Query:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGT
        + ++M   DP++K+MA  +KE+R+  AE+ K+ A+A HAAE+Q    TGTGT    ATG  T
Subjt:  QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGT

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGTGGACAAAATGCGGGCCCACGACCCGGTGGAGAAAGACATGGCCGAGGCGAGGAAAGAAGAGAGAATCACCGAGGCAGAGATCAACAAGCAACAAGCGCGTGCAGC
CCACGCGGCCGAGAGACAAGCCGGCACCGGCACCGGCACCGGAACACACGCCGGATTAGCCACCGGAACCGGGACTGGGGTCGGGCCGACCACCGGCACC
mRNA sequenceShow/hide mRNA sequence
CAGGTGGACAAAATGCGGGCCCACGACCCGGTGGAGAAAGACATGGCCGAGGCGAGGAAAGAAGAGAGAATCACCGAGGCAGAGATCAACAAGCAACAAGCGCGTGCAGC
CCACGCGGCCGAGAGACAAGCCGGCACCGGCACCGGCACCGGAACACACGCCGGATTAGCCACCGGAACCGGGACTGGGGTCGGGCCGACCACCGGCACC
Protein sequenceShow/hide protein sequence
QVDKMRAHDPVEKDMAEARKEERITEAEINKQQARAAHAAERQAGTGTGTGTHAGLATGTGTGVGPTTGT