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MS023018 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023018
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibosomal protein L2
Genome locationscaffold357:607973..608074
RNA-Seq ExpressionMS023018
SyntenyMS023018
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_131796642.1 hypothetical protein [Candidatus Frankia datiscae]2.5e-0994.12Show/hide
Query:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL
        RWIEGV QRKCKTIEEF PPRKILEPTTTTIRGL
Subjt:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL

XP_023521202.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784913 [Cucurbita pepo subsp. pepo]9.4e-0991.18Show/hide
Query:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL
        RWIEGV QRKCKTIEEF PPRKILEPTTTTI GL
Subjt:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL

YP_003587229.1 ribosomal protein L2 [Citrullus lanatus]2.5e-0994.12Show/hide
Query:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL
        RWIEGV QRKCKTIEEF PPRKILEPTTTTIRGL
Subjt:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL

YP_003587363.1 ribosomal protein L2 [Cucurbita pepo]2.5e-0994.12Show/hide
Query:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL
        RWIEGV QRKCKTIEEF PPRKILEPTTTTIRGL
Subjt:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL

YP_009913619.1 ribosomal protein L2 [Luffa acutangula]2.5e-0994.12Show/hide
Query:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL
        RWIEGV QRKCKTIEEF PPRKILEPTTTTIRGL
Subjt:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL

TrEMBL top hitse value%identityAlignment
A0A344A015 Ribosomal protein L21.5e-0788.24Show/hide
Query:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL
        RWIEGV QRK  TIEEF PPRKILEPTTTTIRGL
Subjt:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL

A0A7D5XZ32 Ribosomal protein L21.2e-0994.12Show/hide
Query:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL
        RWIEGV QRKCKTIEEF PPRKILEPTTTTIRGL
Subjt:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL

B6VJV4 Ribosomal protein L21.9e-0783.78Show/hide
Query:  RWIEGV---HQRKCKTIEEFTPPRKILEPTTTTIRGL
        RWIEGV    QRKC TIEEF PPRKILEPTTTTIRGL
Subjt:  RWIEGV---HQRKCKTIEEFTPPRKILEPTTTTIRGL

D5I399 Ribosomal protein L21.2e-0994.12Show/hide
Query:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL
        RWIEGV QRKCKTIEEF PPRKILEPTTTTIRGL
Subjt:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL

D5I3E9 Ribosomal protein L21.2e-0994.12Show/hide
Query:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL
        RWIEGV QRKCKTIEEF PPRKILEPTTTTIRGL
Subjt:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL

SwissProt top hitse value%identityAlignment
P0C8K6 60S ribosomal protein L2, mitochondrial8.5e-0573.53Show/hide
Query:  RWIEGV---HQRKCKTIEEFTPPRKILEPTTTTI
        RWIEGV    QRK KTIEEF  PRKILE TT TI
Subjt:  RWIEGV---HQRKCKTIEEFTPPRKILEPTTTTI

P92812 60S ribosomal protein L2, mitochondrial8.5e-0573.53Show/hide
Query:  RWIEGV---HQRKCKTIEEFTPPRKILEPTTTTI
        RWIEGV    QRK KTIEEF  PRKILE TT TI
Subjt:  RWIEGV---HQRKCKTIEEFTPPRKILEPTTTTI

P93311 60S ribosomal protein L2, mitochondrial9.1e-0770.59Show/hide
Query:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL
        RWI+G  Q+K  TIE+F PPRKILEPTT TI GL
Subjt:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL

Q2F969 60S ribosomal protein L2, mitochondrial8.5e-0573.53Show/hide
Query:  RWIEGV---HQRKCKTIEEFTPPRKILEPTTTTI
        RWIEGV    QRK KTIEEF  PRKILE TT TI
Subjt:  RWIEGV---HQRKCKTIEEFTPPRKILEPTTTTI

Arabidopsis top hitse value%identityAlignment
AT2G07715.1 Nucleic acid-binding, OB-fold-like protein6.5e-0870.59Show/hide
Query:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL
        RWI+G  Q+K  TIE+F PPRKILEPTT TI GL
Subjt:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL

ATMG00560.1 Nucleic acid-binding, OB-fold-like protein6.5e-0870.59Show/hide
Query:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL
        RWI+G  Q+K  TIE+F PPRKILEPTT TI GL
Subjt:  RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGATGGATCGAGGGGGTCCACCAGAGGAAATGCAAGACGATAGAGGAGTTCACTCCGCCGCGTAAGATCCTCGAACCTACCACGACCACCATCCGCGGCCTC
mRNA sequenceShow/hide mRNA sequence
CGATGGATCGAGGGGGTCCACCAGAGGAAATGCAAGACGATAGAGGAGTTCACTCCGCCGCGTAAGATCCTCGAACCTACCACGACCACCATCCGCGGCCTC
Protein sequenceShow/hide protein sequence
RWIEGVHQRKCKTIEEFTPPRKILEPTTTTIRGL