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MS023032 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023032
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionArabinogalactan peptide 23
Genome locationscaffold357:763389..763601
RNA-Seq ExpressionMS023032
SyntenyMS023032
Gene Ontology termsNA
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038906349.1 arabinogalactan protein 23 [Benincasa hispida]1.0e-0460.56Show/hide
Query:  MDMKKVTCAVLVAAAVASGAMAASAVEGPISTPGSVSAPAPSTGEASAAAALSVVGAFVGASFASLFAYCL
        MDMKKVTCAVLV+AAV S  MA+   EGP        APAP     +AAAAL  VGAF+GAS AS FAY L
Subjt:  MDMKKVTCAVLVAAAVASGAMAASAVEGPISTPGSVSAPAPSTGEASAAAALSVVGAFVGASFASLFAYCL
XP_039059181.1 arabinogalactan protein 23-like [Hibiscus syriacus]8.5e-0450Show/hide
Query:  MDMKKVTCAVLVAAAVASGAMAASAVEGPISTPG---------SVSAPAPSTGEASAAAALSVVGAFVGASFASLFAYCL
        MDMKKV+CA++VAAA  S  MAA     P  + G         SVSAPAP    ++AAA L V+G+ VGAS  SLF+Y L
Subjt:  MDMKKVTCAVLVAAAVASGAMAASAVEGPISTPG---------SVSAPAPSTGEASAAAALSVVGAFVGASFASLFAYCL
TrEMBL top hitse value%identityAlignment
A0A5D3DQ83 Arabinogalactan peptide 237.0e-0460.56Show/hide
Query:  MDMKKVTCAVLVAAAVASGAMAASAVEGPISTPGSVSAPAPSTGEASAAAALSVVGAFVGASFASLFAYCL
        MDMKKVTCAVLVAAA  S  MA S  EGP        APAPS   + A AAL  VGAF+GAS  S FAY L
Subjt:  MDMKKVTCAVLVAAAVASGAMAASAVEGPISTPGSVSAPAPSTGEASAAAALSVVGAFVGASFASLFAYCL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATGAAGAAGGTCACCTGCGCCGTCCTTGTCGCCGCTGCTGTCGCGAGTGGCGCCATGGCAGCCTCCGCTGTTGAAGGCCCGATCTCGACTCCCGGCTCGGTCTC
GGCCCCTGCCCCGTCCACTGGCGAAGCCTCGGCTGCTGCTGCCTTGTCCGTTGTTGGGGCATTCGTTGGTGCCTCTTTTGCTTCACTCTTTGCCTACTGCTTG
mRNA sequenceShow/hide mRNA sequence
ATGGACATGAAGAAGGTCACCTGCGCCGTCCTTGTCGCCGCTGCTGTCGCGAGTGGCGCCATGGCAGCCTCCGCTGTTGAAGGCCCGATCTCGACTCCCGGCTCGGTCTC
GGCCCCTGCCCCGTCCACTGGCGAAGCCTCGGCTGCTGCTGCCTTGTCCGTTGTTGGGGCATTCGTTGGTGCCTCTTTTGCTTCACTCTTTGCCTACTGCTTG
Protein sequenceShow/hide protein sequence
MDMKKVTCAVLVAAAVASGAMAASAVEGPISTPGSVSAPAPSTGEASAAAALSVVGAFVGASFASLFAYCL