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MS023047 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023047
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionsenescence associated gene 20
Genome locationscaffold502:90859..91317
RNA-Seq ExpressionMS023047
SyntenyMS023047
Gene Ontology termsNA
InterPro domainsIPR009798 - Wound-induced protein Wun1-like
IPR032710 - NTF2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059984.1 putative Senescence associated protein 20 [Cucumis melo var. makuwa]2.3e-5470.99Show/hide
Query:  TKLAN---SDQSEEEIGVVRALYEALASKEVDTVHRLVAPDLEWWFHGPPSHQYLMRLLTGSSSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAWT
        TKLAN   S +  E +G VRALYEAL +K+V+TVHRL+APDLEWWFHGPPSHQYLMRLLTG +SSSFVFAP+S+V  GPT+VLAEG+  KRAVSWVHAWT
Subjt:  TKLAN---SDQSEEEIGVVRALYEALASKEVDTVHRLVAPDLEWWFHGPPSHQYLMRLLTGSSSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAWT

Query:  ITDGVITHVKEYFNTSVTVKRFATVADD------SPAANCQSVWQSKVCGGGDSVPGLVLAL
        ITDGVITHVKEY NTSVTVKRF++ A D      SP  NC+S+WQSKV    +S+P LVLAL
Subjt:  ITDGVITHVKEYFNTSVTVKRFATVADD------SPAANCQSVWQSKVCGGGDSVPGLVLAL

KAE9451532.1 hypothetical protein C3L33_16564, partial [Rhododendron williamsianum]1.1e-4360Show/hide
Query:  TKLANSDQSEEEI---GVVRALYEALASKEVDTVHRLVAPDLEWWFHGPPSHQYLMRLLTGSSSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAWT
        T+LANS +  EE     VV ALYEAL++++VDTVH+L+APDLEWWFHGPPSHQ++MRLLTGSS+SSF F P SV AFG T VL EG D +R++SW+HAWT
Subjt:  TKLANSDQSEEEI---GVVRALYEALASKEVDTVHRLVAPDLEWWFHGPPSHQYLMRLLTGSSSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAWT

Query:  IT-DGVITHVKEYFNTSVTVKRFATVADDSP------------AANCQSVWQSKVCGG-GDSVPGLVLAL
        +T DG+IT V+EYFNTS+TV RF      SP            A +C SVW+S V    G SVPGLVLAL
Subjt:  IT-DGVITHVKEYFNTSVTVKRFATVADDSP------------AANCQSVWQSKVCGG-GDSVPGLVLAL

KAG6607351.1 Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. sororia]1.2e-6074.85Show/hide
Query:  TKLAN----SDQSEEEIGVVRALYEALASKEVDTVHRLVAPDLEWWFHGPPSHQYLMRLLTGSSSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAW
        TKLAN    S+Q+E  + +V ALYEAL+SK+V+TVHRL+APDLEWWFHGPPSHQYLMRLLTG SSSSFVFAP+S+VAFGPT VLAEGYD KRAVSWVHAW
Subjt:  TKLAN----SDQSEEEIGVVRALYEALASKEVDTVHRLVAPDLEWWFHGPPSHQYLMRLLTGSSSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAW

Query:  TITDGVITHVKEYFNTSVTVKRFATVAD-DSPAA-------------NCQSVWQSKVCGGGDSVPGLVLAL
        TITDGVITHVKEY NTSVTVKRFAT AD +SP++             NCQSVWQSKVC  G+SVPGLVLAL
Subjt:  TITDGVITHVKEYFNTSVTVKRFATVAD-DSPAA-------------NCQSVWQSKVCGGGDSVPGLVLAL

KAG7037026.1 Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-6074.85Show/hide
Query:  TKLAN----SDQSEEEIGVVRALYEALASKEVDTVHRLVAPDLEWWFHGPPSHQYLMRLLTGSSSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAW
        TKLAN    S+Q+E  + +V ALYEAL+SK+V+TVHRL+APDLEWWFHGPPSHQYLMRLLTG SSSSFVFAP+S+VAFGPT VLAEGYD KRAVSWVHAW
Subjt:  TKLAN----SDQSEEEIGVVRALYEALASKEVDTVHRLVAPDLEWWFHGPPSHQYLMRLLTGSSSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAW

Query:  TITDGVITHVKEYFNTSVTVKRFATVAD-DSPAA-------------NCQSVWQSKVCGGGDSVPGLVLAL
        TITDGVITHVKEY NTSVTVKRFAT AD +SP++             NCQSVWQSKVC  G+SVPGLVLAL
Subjt:  TITDGVITHVKEYFNTSVTVKRFATVAD-DSPAA-------------NCQSVWQSKVCGGGDSVPGLVLAL

XP_022154901.1 senescence associated gene 20 [Momordica charantia]1.1e-4596.08Show/hide
Query:  MRLLTG-SSSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAWTITDGVITHVKEYFNTSVTVKRFATVADDSPAANCQSVWQSKVCGGGDSVPGLVL
        MRLLTG SSSSSFVF+PVSVVAFGPTVVLAEGYDAKRAVSWVHAWTITDGVITHVKEYFNTSVTVKRFATV DDSPAANCQSVWQSKVCGG DSVPGLVL
Subjt:  MRLLTG-SSSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAWTITDGVITHVKEYFNTSVTVKRFATVADDSPAANCQSVWQSKVCGGGDSVPGLVL

Query:  AL
        AL
Subjt:  AL

TrEMBL top hitse value%identityAlignment
A0A067EEE9 Uncharacterized protein1.5e-4358.24Show/hide
Query:  TKLANS-----DQSEEEIGVVRALYEALASKEVDTVHRLVAPDLEWWFHGPPSHQYLMRLLTGSSSSS-----FVFAPVSVVAFGPTVVLAEGYDAKRAV
        ++LANS     ++ E  I VV+ LY+AL S +V TVHRL+  DLEWWFHGPP HQ+LM +LTGSSSSS     F F P+S VAFGPTV++ EG+  + +V
Subjt:  TKLANS-----DQSEEEIGVVRALYEALASKEVDTVHRLVAPDLEWWFHGPPSHQYLMRLLTGSSSSS-----FVFAPVSVVAFGPTVVLAEGYDAKRAV

Query:  SWVHAWTITDGVITHVKEYFNTSVTVKRF-------ATVADDSPAANCQSVWQSKVCGGGDSVPGLVLAL
        SWVHAWT+TDG+IT V+EYFNTSVTV RF       + VA  + +++CQSVWQSK+C   +SVPGLVLAL
Subjt:  SWVHAWTITDGVITHVKEYFNTSVTVKRF-------ATVADDSPAANCQSVWQSKVCGGGDSVPGLVLAL

A0A2N9EI45 Uncharacterized protein5.1e-4461.27Show/hide
Query:  KLANSDQSEEE----IGVVRALYEALASKEVDTVHRLVAPDLEWWFHGPPSHQYLMRLLTGSS-SSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAW
        +LANS  S EE      VV ALY+AL+SK+ D V RL+APDLEWWFHGPP+HQ+LMRLLTGSS   SFVF P S+VAFG T VL EGYD +R+VSWVHAW
Subjt:  KLANSDQSEEE----IGVVRALYEALASKEVDTVHRLVAPDLEWWFHGPPSHQYLMRLLTGSS-SSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAW

Query:  TITDGVITHVKEYFNTSVTVKRF----------ATVADDSPAA------NCQSVWQSKVCGGGDSVPGLVLAL
        T+TDG+IT V+EYFNTSV V RF          A+    SPA        CQSVW+SK+C   +SVPGLVLAL
Subjt:  TITDGVITHVKEYFNTSVTVKRF----------ATVADDSPAA------NCQSVWQSKVCGGGDSVPGLVLAL

A0A5A7UY51 Putative Senescence associated protein 201.1e-5470.99Show/hide
Query:  TKLAN---SDQSEEEIGVVRALYEALASKEVDTVHRLVAPDLEWWFHGPPSHQYLMRLLTGSSSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAWT
        TKLAN   S +  E +G VRALYEAL +K+V+TVHRL+APDLEWWFHGPPSHQYLMRLLTG +SSSFVFAP+S+V  GPT+VLAEG+  KRAVSWVHAWT
Subjt:  TKLAN---SDQSEEEIGVVRALYEALASKEVDTVHRLVAPDLEWWFHGPPSHQYLMRLLTGSSSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAWT

Query:  ITDGVITHVKEYFNTSVTVKRFATVADD------SPAANCQSVWQSKVCGGGDSVPGLVLAL
        ITDGVITHVKEY NTSVTVKRF++ A D      SP  NC+S+WQSKV    +S+P LVLAL
Subjt:  ITDGVITHVKEYFNTSVTVKRFATVADD------SPAANCQSVWQSKVCGGGDSVPGLVLAL

A0A6A4L217 Uncharacterized protein (Fragment)5.1e-4460Show/hide
Query:  TKLANSDQSEEEI---GVVRALYEALASKEVDTVHRLVAPDLEWWFHGPPSHQYLMRLLTGSSSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAWT
        T+LANS +  EE     VV ALYEAL++++VDTVH+L+APDLEWWFHGPPSHQ++MRLLTGSS+SSF F P SV AFG T VL EG D +R++SW+HAWT
Subjt:  TKLANSDQSEEEI---GVVRALYEALASKEVDTVHRLVAPDLEWWFHGPPSHQYLMRLLTGSSSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAWT

Query:  IT-DGVITHVKEYFNTSVTVKRFATVADDSP------------AANCQSVWQSKVCGG-GDSVPGLVLAL
        +T DG+IT V+EYFNTS+TV RF      SP            A +C SVW+S V    G SVPGLVLAL
Subjt:  IT-DGVITHVKEYFNTSVTVKRFATVADDSP------------AANCQSVWQSKVCGG-GDSVPGLVLAL

A0A6J1DQ36 senescence associated gene 205.5e-4696.08Show/hide
Query:  MRLLTG-SSSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAWTITDGVITHVKEYFNTSVTVKRFATVADDSPAANCQSVWQSKVCGGGDSVPGLVL
        MRLLTG SSSSSFVF+PVSVVAFGPTVVLAEGYDAKRAVSWVHAWTITDGVITHVKEYFNTSVTVKRFATV DDSPAANCQSVWQSKVCGG DSVPGLVL
Subjt:  MRLLTG-SSSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAWTITDGVITHVKEYFNTSVTVKRFATVADDSPAANCQSVWQSKVCGGGDSVPGLVL

Query:  AL
        AL
Subjt:  AL

SwissProt top hitse value%identityAlignment
P20144 Wound-induced protein 15.5e-1951.89Show/hide
Query:  MRLLTGSS---SSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAWTITDGVITHVKEYFNTSVTVKRFATVADDS-PAANCQSVWQSKVCGG-GDSVP
        M++LTG++   ++SF F   ++  FG +VVL EG D  R+++WVHAWT+TDGVIT V+EYFNTS+TV RF      S    +C SVW+S +    G SVP
Subjt:  MRLLTGSS---SSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAWTITDGVITHVKEYFNTSVTVKRFATVADDS-PAANCQSVWQSKVCGG-GDSVP

Query:  GLVLAL
        GLVLAL
Subjt:  GLVLAL

Q94AK6 Senescence associated gene 208.2e-2353.15Show/hide
Query:  MRLLTGS---SSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAWTITDGVITHVKEYFNTSVTVKRFATV------ADDSPAANCQSVWQSKVCG-G
        MR+LTG    SSSSF F P+SVV+FG TV+ AEG DA  ++SW+HAWT+ +G+IT V+EY NTS+TV R   V      A+ +P ++C SVW+S+  G  
Subjt:  MRLLTGS---SSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAWTITDGVITHVKEYFNTSVTVKRFATV------ADDSPAANCQSVWQSKVCG-G

Query:  GDSVPGLVLAL
        G  VPGLVLA+
Subjt:  GDSVPGLVLAL

Arabidopsis top hitse value%identityAlignment
AT3G10985.1 senescence associated gene 205.8e-2453.15Show/hide
Query:  MRLLTGS---SSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAWTITDGVITHVKEYFNTSVTVKRFATV------ADDSPAANCQSVWQSKVCG-G
        MR+LTG    SSSSF F P+SVV+FG TV+ AEG DA  ++SW+HAWT+ +G+IT V+EY NTS+TV R   V      A+ +P ++C SVW+S+  G  
Subjt:  MRLLTGS---SSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAWTITDGVITHVKEYFNTSVTVKRFATV------ADDSPAANCQSVWQSKVCG-G

Query:  GDSVPGLVLAL
        G  VPGLVLA+
Subjt:  GDSVPGLVLAL

AT5G01740.1 Nuclear transport factor 2 (NTF2) family protein7.6e-2443.45Show/hide
Query:  GVVRALYEALASKEVDTVHRLVAPDLEWWFHGPPSHQYLMRLLTGS--SSSSFVFAP--VSVVAFGPTVVLAEGYDAKRAVSWVHAWTITDGVITHVKEY
        G +  LY+AL   +  TV ++VA D+EWWFHGP   Q++MRLLTG      SF F P  V VV  G   V+AEG++  R V WVH W + DGV+T ++EY
Subjt:  GVVRALYEALASKEVDTVHRLVAPDLEWWFHGPPSHQYLMRLLTGS--SSSSFVFAP--VSVVAFGPTVVLAEGYDAKRAVSWVHAWTITDGVITHVKEY

Query:  FNTSVTVKRFATVADDSPAANCQSVWQSKVCG-GGDSVPGLVLAL
        FNT +TV  ++  A       C +VW+S        S+P L+LA+
Subjt:  FNTSVTVKRFATVADDSPAANCQSVWQSKVCG-GGDSVPGLVLAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACAAAACTGGCAAACTCAGATCAGTCGGAGGAGGAGATCGGCGTGGTGAGGGCCCTGTACGAAGCATTGGCCTCCAAAGAAGTGGACACCGTGCACCGCCTTGTGGCGCC
GGACCTCGAGTGGTGGTTCCATGGTCCGCCGTCGCACCAGTACTTGATGCGCCTCCTCACCGGCTCCTCCTCCTCCTCCTTCGTCTTCGCCCCTGTCTCCGTCGTCGCGT
TCGGGCCCACCGTCGTCCTCGCCGAAGGCTACGACGCGAAACGCGCCGTTTCGTGGGTCCACGCGTGGACCATAACTGATGGCGTAATCACTCACGTCAAGGAGTATTTC
AACACTTCCGTTACGGTCAAGCGCTTCGCCACCGTCGCTGACGACTCGCCGGCAGCTAACTGCCAAAGTGTGTGGCAGAGCAAGGTGTGCGGCGGCGGCGACTCCGTGCC
TGGTCTTGTTTTGGCACTC
mRNA sequenceShow/hide mRNA sequence
ACAAAACTGGCAAACTCAGATCAGTCGGAGGAGGAGATCGGCGTGGTGAGGGCCCTGTACGAAGCATTGGCCTCCAAAGAAGTGGACACCGTGCACCGCCTTGTGGCGCC
GGACCTCGAGTGGTGGTTCCATGGTCCGCCGTCGCACCAGTACTTGATGCGCCTCCTCACCGGCTCCTCCTCCTCCTCCTTCGTCTTCGCCCCTGTCTCCGTCGTCGCGT
TCGGGCCCACCGTCGTCCTCGCCGAAGGCTACGACGCGAAACGCGCCGTTTCGTGGGTCCACGCGTGGACCATAACTGATGGCGTAATCACTCACGTCAAGGAGTATTTC
AACACTTCCGTTACGGTCAAGCGCTTCGCCACCGTCGCTGACGACTCGCCGGCAGCTAACTGCCAAAGTGTGTGGCAGAGCAAGGTGTGCGGCGGCGGCGACTCCGTGCC
TGGTCTTGTTTTGGCACTC
Protein sequenceShow/hide protein sequence
TKLANSDQSEEEIGVVRALYEALASKEVDTVHRLVAPDLEWWFHGPPSHQYLMRLLTGSSSSSFVFAPVSVVAFGPTVVLAEGYDAKRAVSWVHAWTITDGVITHVKEYF
NTSVTVKRFATVADDSPAANCQSVWQSKVCGGGDSVPGLVLAL