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MS023050 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023050
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein LURP-one-related 7
Genome locationscaffold502:141264..143433
RNA-Seq ExpressionMS023050
SyntenyMS023050
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007612 - LURP-one-related
IPR025659 - Tubby-like, C-terminal
IPR038595 - LURP-one-related superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154859.1 protein LURP-one-related 7 [Momordica charantia]2.4e-9898.94Show/hide
Query:  MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSIN
        MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLD AAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSIN
Subjt:  MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSIN

Query:  KLTRTEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM
        KLTRTEFKVFL GENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM
Subjt:  KLTRTEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM

XP_022948358.1 protein LURP-one-related 7 [Cucurbita moschata]4.0e-7780.85Show/hide
Query:  MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSIN
        MANSS  PA C+A+LPIPVDLFLS KHPD++T SSGD IFRLSRQS KS SIDKI+L DAAAAA  PLISIHR +KESW GFKGD+GE++LLFKV R++N
Subjt:  MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSIN

Query:  KLTRTEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM
        KL RTEFKVFL GEN DDSNASLEMKG+PFQRSCTIYKGNTIVAQTSLMHKL+Q+ VRRGRFRLTIFPG+VDP+LIVAL+VIFFDGR+
Subjt:  KLTRTEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM

XP_023523464.1 protein LURP-one-related 7 isoform X1 [Cucurbita pepo subsp. pepo]6.8e-7780.53Show/hide
Query:  MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLD--AAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRS
        MANSS  PA C+A LPIPVDLFLS KHPD++T SSG+IIFRLSRQS KS SIDKI+L D  AAAAAA PLISIHR +KESW GFKGD+GE++LLFKV R+
Subjt:  MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLD--AAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRS

Query:  INKLTRTEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM
        +NKL RTEFKVFL GEN DDSNASLEMKG+PFQRSCTIYKGNTIVAQTSLMHKL+Q+ VRRGRFRLTIFPG+VDP+LIVAL+VIFFDGR+
Subjt:  INKLTRTEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM

XP_023523465.1 protein LURP-one-related 7 isoform X2 [Cucurbita pepo subsp. pepo]5.2e-7780.95Show/hide
Query:  MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLD-AAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSI
        MANSS  PA C+A LPIPVDLFLS KHPD++T SSG+IIFRLSRQS KS SIDKI+L D AAAAAA PLISIHR +KESW GFKGD+GE++LLFKV R++
Subjt:  MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLD-AAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSI

Query:  NKLTRTEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM
        NKL RTEFKVFL GEN DDSNASLEMKG+PFQRSCTIYKGNTIVAQTSLMHKL+Q+ VRRGRFRLTIFPG+VDP+LIVAL+VIFFDGR+
Subjt:  NKLTRTEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM

XP_038884438.1 protein LURP-one-related 7 [Benincasa hispida]6.6e-8083.51Show/hide
Query:  MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSIN
        MANSS  PA CSAALPI VDLFLS +HPDYLTNSSGDII+R++R S KS S+DKI+LLD  AAAADPLISI R +KESW GFKGDVGEE+LLFKV R++N
Subjt:  MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSIN

Query:  KLTRTEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM
        KL RTEFKVFL GE+LDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKL+Q+WVRRGRFRLTIFP  VDPALIVALVVIFFDGRM
Subjt:  KLTRTEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM

TrEMBL top hitse value%identityAlignment
A0A0A0K429 Uncharacterized protein3.3e-7779.79Show/hide
Query:  MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSIN
        MAN S  PA CS ALPIP+DLFLS +HPDYLTNSSGDII+R++R + KS S+DKILL    A AADPLISI R +KESW GFKGDVGEENLLFKV R++N
Subjt:  MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSIN

Query:  KLTRTEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM
        KL RTEFKVFL G NLDDSNAS EMKGWPFQRSCT+Y GNTIVAQTSLMHKL Q+WVRRGRFRLTIFP SVDPALIVAL+VIFFDGRM
Subjt:  KLTRTEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM

A0A1S3CIB3 protein LURP-one-related 79.0e-7577.13Show/hide
Query:  MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSIN
        MANSS  P  CSAALPIP+DLFLS +HP YLTNSSGDII++++R + KS S+DKILL    A AADPLISI R +KESW GFKGDVGEENLLFKV R++N
Subjt:  MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSIN

Query:  KLTRTEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM
        K  RTEF VFL G NLDD N S EMKGWPFQRSCT+Y GNTIVAQTSLMHKL+Q+WVRRGRFRLTIFP SVDPALIVAL+VIFFDGRM
Subjt:  KLTRTEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM

A0A6J1DNI1 protein LURP-one-related 71.2e-9898.94Show/hide
Query:  MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSIN
        MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLD AAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSIN
Subjt:  MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSIN

Query:  KLTRTEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM
        KLTRTEFKVFL GENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM
Subjt:  KLTRTEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM

A0A6J1G943 protein LURP-one-related 71.9e-7780.85Show/hide
Query:  MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSIN
        MANSS  PA C+A+LPIPVDLFLS KHPD++T SSGD IFRLSRQS KS SIDKI+L DAAAAA  PLISIHR +KESW GFKGD+GE++LLFKV R++N
Subjt:  MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSIN

Query:  KLTRTEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM
        KL RTEFKVFL GEN DDSNASLEMKG+PFQRSCTIYKGNTIVAQTSLMHKL+Q+ VRRGRFRLTIFPG+VDP+LIVAL+VIFFDGR+
Subjt:  KLTRTEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM

A0A6J1KES0 protein LURP-one-related 75.7e-7780.43Show/hide
Query:  SSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSINKLTR
        SS PA C+A LPIPVDLFLS KHPD++T+SSGDIIFRLSRQ  KS SIDKI+L DAAAAAA PLISIHR +KESW GFKGD+GE++ LFKV R++NKL R
Subjt:  SSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSINKLTR

Query:  TEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM
        TEFKVFL GEN D+SNASLEMKG+PFQRSCTIYKGNTIVAQTSLMHKL+Q+ VRRGRFRLTIFPG+VDP+LIVAL+VIFFDGR+
Subjt:  TEFKVFLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM

SwissProt top hitse value%identityAlignment
Q8GWL2 Protein LURP-one-related 72.1e-2844.63Show/hide
Query:  IPVDLFLSNKHPDY------LTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGE-ENLLFKVHRSINKLTRTEFKV
        IPVDLF S K P          +SS  ++F L + SS   S     LLD++     PL SI R     W   KGDV + ++L+  V R+  + ++TE +V
Subjt:  IPVDLFLSNKHPDY------LTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGE-ENLLFKVHRSINKLTRTEFKV

Query:  FLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDG
           GE    S+ +L +KG PFQ+SCTIY  ++IVAQTSLM+KL Q++V R +FRLTIFPGS+D +L+VA+V IF  G
Subjt:  FLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDG

Arabidopsis top hitse value%identityAlignment
AT2G30270.1 Protein of unknown function (DUF567)1.5e-2944.63Show/hide
Query:  IPVDLFLSNKHPDY------LTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGE-ENLLFKVHRSINKLTRTEFKV
        IPVDLF S K P          +SS  ++F L + SS   S     LLD++     PL SI R     W   KGDV + ++L+  V R+  + ++TE +V
Subjt:  IPVDLFLSNKHPDY------LTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGE-ENLLFKVHRSINKLTRTEFKV

Query:  FLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDG
           GE    S+ +L +KG PFQ+SCTIY  ++IVAQTSLM+KL Q++V R +FRLTIFPGS+D +L+VA+V IF  G
Subjt:  FLDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATTCTTCTTCAGCTCCGGCTACTTGCTCTGCTGCTCTGCCGATTCCCGTTGATCTCTTCCTATCCAATAAACATCCCGACTACTTAACTAATTCCTCCGGCGA
TATCATTTTTAGACTCAGTCGTCAATCTTCGAAATCGCCGTCAATTGACAAGATACTACTGCTTGACGCCGCCGCCGCCGCCGCCGATCCTCTCATTTCAATACACCGCC
ATAGCAAAGAATCTTGGCATGGCTTCAAGGGGGATGTTGGTGAGGAGAACCTGCTCTTCAAAGTGCATAGATCAATCAACAAACTCACAAGAACTGAGTTCAAAGTCTTC
CTTGATGGTGAAAATTTGGACGACTCGAACGCTAGCTTGGAGATGAAAGGTTGGCCTTTCCAGAGATCCTGTACTATATATAAAGGCAATACTATAGTGGCCCAGACGAG
CCTGATGCACAAGCTTAATCAAGTTTGGGTCAGAAGGGGAAGATTTCGGCTAACCATTTTTCCTGGTTCTGTAGATCCGGCATTGATTGTGGCTTTGGTTGTAATATTCT
TTGATGGACGAATG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAATTCTTCTTCAGCTCCGGCTACTTGCTCTGCTGCTCTGCCGATTCCCGTTGATCTCTTCCTATCCAATAAACATCCCGACTACTTAACTAATTCCTCCGGCGA
TATCATTTTTAGACTCAGTCGTCAATCTTCGAAATCGCCGTCAATTGACAAGATACTACTGCTTGACGCCGCCGCCGCCGCCGCCGATCCTCTCATTTCAATACACCGCC
ATAGCAAAGAATCTTGGCATGGCTTCAAGGGGGATGTTGGTGAGGAGAACCTGCTCTTCAAAGTGCATAGATCAATCAACAAACTCACAAGAACTGAGTTCAAAGTCTTC
CTTGATGGTGAAAATTTGGACGACTCGAACGCTAGCTTGGAGATGAAAGGTTGGCCTTTCCAGAGATCCTGTACTATATATAAAGGCAATACTATAGTGGCCCAGACGAG
CCTGATGCACAAGCTTAATCAAGTTTGGGTCAGAAGGGGAAGATTTCGGCTAACCATTTTTCCTGGTTCTGTAGATCCGGCATTGATTGTGGCTTTGGTTGTAATATTCT
TTGATGGACGAATG
Protein sequenceShow/hide protein sequence
MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDAAAAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSINKLTRTEFKVF
LDGENLDDSNASLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVVIFFDGRM