CuGenDBv2

Gene ID	MS023051
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RNA-directed DNA methylation 4
Genome location	scaffold502:145345..147987
RNA-Seq Expression	MS023051
Synteny	MS023051
Gene Ontology terms	GO:0006306 - DNA methylation (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0009791 - post-embryonic development (biological process) GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6607356.1 RNA-directed DNA methylation 4, partial [Cucurbita argyrosperma subsp. sororia]

6.0e-155

77.36

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Query:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT
        MA+IGESSSS PK AD KPVLVRVKRKASQSRLDALWLEINERPLKRPLLDF+NLSISETFQ EELKTKKIFVQHVETL+SSEA+VDI+QSFVAPDAAG 
Subjt:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT

Query:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL
        +EN++KNEERRRNFKRE PRQ+QLL K RQEQEVLAK ARFEQIW+SRKG+KD KDDQLHD YHIYDIVRLDTN+ SSE P+ E M+LEDQSMLSSYLPL
Subjt:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL

Query:  LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDYE
        LREFIPSAA EIESDI+AN MKQD+PVDDYVYDYYTVK+++ IAEDDASNPFPL                            IQVDDLDLYDGPDDSDYE
Subjt:  LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDYE

Query:  SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRWS
        SDDSNAENNPHFDYPDE SEE +EL SES+N ES+++DDD   KQSSEAND EED+LS +  QL +DE+YGDFD+DDDD  SFD DSNGGH EGEDWRWS
Subjt:  SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRWS

Query:  YR
        YR
Subjt:  YR

XP_022154907.1 RNA-directed DNA methylation 4 [Momordica charantia]

1.3e-189

92.04

Show/hide

Query:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT
        MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT
Subjt:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT

Query:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL
        VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIW+SRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL
Subjt:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL

Query:  LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDYE
        LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPL                            IQVDDLDLYDGPDDSDYE
Subjt:  LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDYE

Query:  SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRWS
        SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDF  DDDDANSFDCDSNGGHDEGED RWS
Subjt:  SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRWS

Query:  YR
        YR
Subjt:  YR

XP_022949593.1 RNA-directed DNA methylation 4 [Cucurbita moschata]

5.6e-153

76.87

Show/hide

Query:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT
        MA+IGESSSS PK AD KPVLVRVKRKASQSRLDALWLEINERPLKRPLLDF+NLSISETFQ EELKTKKIFVQHVETL+SSEA+VDI+QSFVAPDAAG 
Subjt:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT

Query:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL
        +EN++KNEERRRNFKRE PRQ+QLL K RQEQEVLAK ARFEQIW+SRKG+KD +DDQLHD YHIYDIVRLDTN+ SSE P+ E M+LEDQSMLSSYLPL
Subjt:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL

Query:  LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDYE
        LREFIPSAA EIESDI+AN MKQD+PVDDYVYDYYTVK+++ IAEDDASNPFPL                            IQVDDLDLYDGPDDSDYE
Subjt:  LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDYE

Query:  SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRWS
        SDDSNAENNPHFDYPDE SEE +EL SES+N ES+++D+D   KQSSEAN  EEDDLS +  QL EDEIYGDFD+DD D  SFD DSNGG +EGEDWRWS
Subjt:  SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRWS

Query:  YR
        YR
Subjt:  YR

XP_023522069.1 RNA-directed DNA methylation 4 [Cucurbita pepo subsp. pepo]

6.6e-154

76.87

Show/hide

Query:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT
        MA+IGESSSS PK AD KPVLVRVKRKASQSRLDALWLEINERPLKRPLLDF+NLSISETFQ EELKTKKIFVQHVETL+SSEA+VDI+QSFVAPDAAG 
Subjt:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT

Query:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL
        +EN++KNEERRRNFKRE PRQ+QLL K RQEQEVLAK ARFEQIW+SRKG+KD KDDQLHD YHIYDIVRLDTN+ SSE P+ E M+LEDQSMLSSYLPL
Subjt:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL

Query:  LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDYE
        LREFIPSAA EIESDI+AN +KQD+PVDDYVYDYYTVK+++ IA+DDASNPFPL                            IQVDDLDLYDGPDDS+YE
Subjt:  LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDYE

Query:  SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRWS
        SDDSNAENNPHFDYPDE SEE +EL SES+N ES+++D+D   KQSSEAND EEDDLS +  QL EDEIYGDFD+DD D  SFD DSNGGH+EGEDWRWS
Subjt:  SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRWS

Query:  YR
        YR
Subjt:  YR

XP_038885561.1 RNA-directed DNA methylation 4 [Benincasa hispida]

4.8e-152

77.17

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Query:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT
        MA+IGESSSSVPKL D KPVLVRVKRKASQSRLDALWLEINERP KRPLLDFENLSISETF  EELKTKKIFVQHVETL+SSEATVDIVQSF APDAA T
Subjt:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT

Query:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQ-EYMSLEDQSMLSSYLP
        +EN++KNEERRR FK+EI RQDQLL KARQEQEVLAKNARFEQIW+SRKGVKD+KDDQLHD+YHIYDIVRLD N+IS E P+Q E MSL+DQSMLSSYLP
Subjt:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQ-EYMSLEDQSMLSSYLP

Query:  LLREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDY
        LLREFIPSAAAEIESDI ANMMKQD+P+DDYVYDYYTVK ++EIA+DDASNPFPL                            IQVDDLDLYDGPDDSDY
Subjt:  LLREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDY

Query:  ESDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRW
        ESDDSNAENNP FDYPDEVS+E +EL S S N E +DNDDD   KQSSE+N+ E+     D+ QLYEDEIYGDF  D+DDA+SFD D+NGGHDEGEDWRW
Subjt:  ESDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRW

Query:  SYR
        SYR
Subjt:  SYR

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DWJ0 RNA-directed DNA methylation 4-like isoform X1

2.9e-147

75.43

Show/hide

Query:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT
        MA IGESSSSVPKL D KPVLVRVKRKASQSRLDALWLEINERPLKRP LDFENLSISET   EELKTKKI VQHVETL+SSEAT DIVQSFVAPDAA T
Subjt:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT

Query:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL
        +EN++KNEERRRNFKREI RQDQLL KARQEQE++AKNARFEQIW+SRKGVKD KDDQLHD+YHIYDIVRLDTN+ISSE P QE MSLEDQSMLSSYLPL
Subjt:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL

Query:  LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDYE
        LREFIPSAAAEIESDI  +MMKQ++PVDDYVYDYYTVK+D+EI EDDAS+PFPL                            IQVDDLD +DGP DSDYE
Subjt:  LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDYE

Query:  SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLS-VDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRW
        +DDSNAENNP FDYPDE     +EL S+SSN E +D+DD+   KQSSE+ND EED+LS  ++ +LYEDEIY DF D+DD A+SFD DSNGGHD+GEDWRW
Subjt:  SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLS-VDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRW

Query:  SYR
        SYR
Subjt:  SYR

A0A5D3BU38 RNA-directed DNA methylation 4-like isoform X1

4.5e-148

75.93

Show/hide

Query:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT
        MA IGESSSSVPKL D KPVLVRVKRKASQSRLDALWLEINERPLKRP LDFENLSISET   EELKTKKIFVQHVETL+SSEAT DIVQSFVAPDAA T
Subjt:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT

Query:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL
        +EN++KNEERRRNFKREI RQDQLL KARQEQE++AKNARFEQIW+SRKGVKD KDDQLHD+YHIYDIVRLDTN+ISSE P QE MSLEDQSMLSSYLPL
Subjt:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL

Query:  LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDYE
        LREFIPSAAAEIESDI A+MMKQ++PVDDYVYDYYTVK+D+EI EDDAS+PFPL                            IQVDDLD +DGP DSDYE
Subjt:  LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDYE

Query:  SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLS-VDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRW
        +DDSNAENNP FDYPDE     +EL S+SSN E +D+DD+   KQSSE+ND EED+LS  ++ +LYEDEIY DF D+DD A+SFD DSNGG DEGEDWRW
Subjt:  SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLS-VDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRW

Query:  SYR
        SYR
Subjt:  SYR

A0A6J1DMY7 RNA-directed DNA methylation 4

6.2e-190

92.04

Show/hide

Query:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT
        MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT
Subjt:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT

Query:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL
        VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIW+SRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL
Subjt:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL

Query:  LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDYE
        LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPL                            IQVDDLDLYDGPDDSDYE
Subjt:  LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDYE

Query:  SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRWS
        SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDF  DDDDANSFDCDSNGGHDEGED RWS
Subjt:  SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRWS

Query:  YR
        YR
Subjt:  YR

A0A6J1GCH8 RNA-directed DNA methylation 4

2.7e-153

76.87

Show/hide

Query:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT
        MA+IGESSSS PK AD KPVLVRVKRKASQSRLDALWLEINERPLKRPLLDF+NLSISETFQ EELKTKKIFVQHVETL+SSEA+VDI+QSFVAPDAAG 
Subjt:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT

Query:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL
        +EN++KNEERRRNFKRE PRQ+QLL K RQEQEVLAK ARFEQIW+SRKG+KD +DDQLHD YHIYDIVRLDTN+ SSE P+ E M+LEDQSMLSSYLPL
Subjt:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL

Query:  LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDYE
        LREFIPSAA EIESDI+AN MKQD+PVDDYVYDYYTVK+++ IAEDDASNPFPL                            IQVDDLDLYDGPDDSDYE
Subjt:  LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDYE

Query:  SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRWS
        SDDSNAENNPHFDYPDE SEE +EL SES+N ES+++D+D   KQSSEAN  EEDDLS +  QL EDEIYGDFD+DD D  SFD DSNGG +EGEDWRWS
Subjt:  SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRWS

Query:  YR
        YR
Subjt:  YR

A0A6J1K8G0 RNA-directed DNA methylation 4

1.4e-149

75.62

Show/hide

Query:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT
        MA+IGESSSS PK AD KPVLVRVKRKASQSRLDALWLEINERPLKRPLLDF+NLSISETF+  ELKTKKIFVQHVETL+SSEA+VDI+QSFVAPDAAG 
Subjt:  MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGT

Query:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL
        +EN++KNEERRRNFKRE PRQ+QLL K RQEQEVL K ARFEQIW+SRKG+KDAKDDQLHD YHIYDIVRLDTN+ SS  P+ + M+LEDQSMLSSYLPL
Subjt:  VENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPL

Query:  LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDYE
        LREFIPSAA EIESDI+AN MKQD+PVDDYVYDYYTVK++++IAEDDASNPFPL                            IQVDDLDLYDGPDDSDYE
Subjt:  LREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDYE

Query:  SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRWS
        SDDSNAENNPHFDYPDE SEE +EL SES+N ES+++D+D   KQSSEAN  EEDDLS +  QL EDEIYGDFD+ D D  SFD DSNGGH+EGE+ RWS
Subjt:  SDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRWS

Query:  YR
        YR
Subjt:  YR

SwissProt top hits

e value

%identity

Alignment

Q8GYP3 RNA-directed DNA methylation 4

1.4e-61

41.13

Show/hide

Query:  GESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQN-----EELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAG
        G   SS     + KPV+VRVKRK  QS LDA WLEINERPLKRP LDF  LSIS++ +      E++K KK+ V+H+ET+  SE T DI+ SF   D   
Subjt:  GESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQN-----EELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAG

Query:  TVENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLP
           +  K EER+  FK++  R++Q L+K+ Q+Q++ ++NARFEQIW+SRKG K+     +H+  H +D++R+DT +       QE+ SLEDQ ML+S+LP
Subjt:  TVENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLP

Query:  LLREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDY
        LLRE IP+AA EIE+DI      Q    ++YVYDYY V  +M+I+ED + N FPL ++                            D+ +  DG D+SDY
Subjt:  LLREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDY

Query:  ESDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDD----------LSVDRAQLYEDEIYGDFDDDDD
        +S+DSNAE++P  DYP+E  EE++E        +  D+DDD  +++ SEA+D  +D+          L  D    Y +++YG  + D++
Subjt:  ESDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDD----------LSVDRAQLYEDEIYGDFDDDDD

Arabidopsis top hits

e value

%identity

Alignment

AT2G30280.1 RNA-directed DNA methylation 4

9.8e-63

41.13

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Query:  GESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQN-----EELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAG
        G   SS     + KPV+VRVKRK  QS LDA WLEINERPLKRP LDF  LSIS++ +      E++K KK+ V+H+ET+  SE T DI+ SF   D   
Subjt:  GESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQN-----EELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAG

Query:  TVENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLP
           +  K EER+  FK++  R++Q L+K+ Q+Q++ ++NARFEQIW+SRKG K+     +H+  H +D++R+DT +       QE+ SLEDQ ML+S+LP
Subjt:  TVENSVKNEERRRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLP

Query:  LLREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDY
        LLRE IP+AA EIE+DI      Q    ++YVYDYY V  +M+I+ED + N FPL ++                            D+ +  DG D+SDY
Subjt:  LLREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDY

Query:  ESDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDD----------LSVDRAQLYEDEIYGDFDDDDD
        +S+DSNAE++P  DYP+E  EE++E        +  D+DDD  +++ SEA+D  +D+          L  D    Y +++YG  + D++
Subjt:  ESDDSNAENNPHFDYPDEVSEEDDELGSESSNGESKDNDDDSEKKQSSEANDSEEDD----------LSVDRAQLYEDEIYGDFDDDDD

Sequences

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CDS sequence

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ATGGCTACCATCGGCGAGAGCTCTTCGTCTGTTCCCAAACTCGCTGACGGAAAGCCAGTGTTGGTTAGGGTTAAGCGCAAAGCTTCCCAATCTCGACTCGATGCACTATG
GCTGGAGATCAATGAGAGGCCACTCAAGCGACCTCTGCTGGATTTTGAGAACTTATCTATCTCAGAAACATTCCAGAATGAGGAACTTAAGACTAAGAAGATATTTGTAC
AGCACGTGGAGACATTGAAAAGCTCTGAGGCCACCGTTGACATTGTACAGTCCTTTGTGGCACCTGATGCTGCTGGCACCGTTGAGAATAGCGTAAAGAATGAGGAGCGT
AGAAGAAATTTTAAGAGAGAGATTCCAAGACAAGATCAGCTGTTGAGTAAAGCTAGACAAGAACAAGAGGTTTTAGCAAAAAATGCTCGATTTGAGCAGATATGGAAAAG
TAGGAAAGGGGTTAAAGATGCAAAAGATGACCAATTACATGACATGTATCATATCTATGATATTGTTCGTCTTGATACAAACAAAATATCAAGTGAAGTACCGGAGCAGG
AGTATATGTCCCTGGAGGATCAGAGTATGTTATCGAGTTACCTGCCTTTACTAAGGGAGTTTATCCCAAGTGCTGCTGCAGAAATTGAGTCAGATATACATGCAAACATG
ATGAAACAAGATGTGCCTGTAGATGATTATGTATATGACTACTACACTGTGAAGAGTGACATGGAGATTGCTGAAGACGATGCCTCTAATCCATTTCCTTTGTGCGTCAT
TGTCTCTCTCTGTTTTCATTTCGTTTGTTTCCTCTCTGTGTTCCCTTTTTGCAATAAATTCACATCTTTTTCCAGGATACAAGTTGATGATTTGGATCTATATGATGGGC
CTGATGACTCAGATTACGAAAGCGATGATTCAAATGCTGAAAACAATCCACACTTTGATTACCCGGATGAGGTATCGGAAGAAGACGATGAGTTGGGGAGTGAATCTTCA
AATGGCGAATCAAAAGATAATGATGATGACAGTGAGAAGAAGCAGTCGTCGGAAGCTAATGACTCAGAAGAGGATGACCTGTCAGTGGACAGAGCCCAATTATACGAGGA
TGAAATATATGGTGATTTTGATGATGATGATGATGATGCTAATAGTTTCGATTGTGACAGTAATGGTGGTCATGATGAGGGTGAGGATTGGAGATGGTCCTATCGT

mRNA sequence

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Protein sequence

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MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISETFQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGTVENSVKNEER
RRNFKREIPRQDQLLSKARQEQEVLAKNARFEQIWKSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEVPEQEYMSLEDQSMLSSYLPLLREFIPSAAAEIESDIHANM
MKQDVPVDDYVYDYYTVKSDMEIAEDDASNPFPLCVIVSLCFHFVCFLSVFPFCNKFTSFSRIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEVSEEDDELGSESS
NGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDFDDDDDDANSFDCDSNGGHDEGEDWRWSYR

MS023051 (gene) of Bitter gourd (TR) v1 genome