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MS023073 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023073
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncentromere protein V-like
Genome locationscaffold775:226703..227107
RNA-Seq ExpressionMS023073
SyntenyMS023073
Gene Ontology termsGO:0016846 - carbon-sulfur lyase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006913 - CENP-V/GFA domain
IPR011057 - Mss4-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464790.1 PREDICTED: centromere protein V isoform X2 [Cucumis melo]9.9e-7088.15Show/hide
Query:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK
        M SELVVH+GGCHCKKVRWRV+APA VVAWDCNCSNCFMR NTHFIVP E F+LLGDS  F+STYTFG+HTAKHTFCK CGITSFYRPRSNPDGVAITFK
Subjt:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV
        CVDPGTLTHVE+RQFDG NWEASYDHTGIASFSK+
Subjt:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV

XP_022158665.1 centromere protein V isoform X1 [Momordica charantia]1.2e-7597.78Show/hide
Query:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK
        MTSELVVHSG CHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGT TAKHTFCKVCGITSFYRPRSNPDGVAITFK
Subjt:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV
        CVDPGTLTHVEIRQFDGKNWEASY HTGIASFSKV
Subjt:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV

XP_022158666.1 centromere protein V isoform X2 [Momordica charantia]1.2e-7597.78Show/hide
Query:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK
        MTSELVVHSG CHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGT TAKHTFCKVCGITSFYRPRSNPDGVAITFK
Subjt:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV
        CVDPGTLTHVEIRQFDGKNWEASY HTGIASFSKV
Subjt:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV

XP_022158667.1 centromere protein V isoform X3 [Momordica charantia]1.2e-7597.78Show/hide
Query:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK
        MTSELVVHSG CHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGT TAKHTFCKVCGITSFYRPRSNPDGVAITFK
Subjt:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV
        CVDPGTLTHVEIRQFDGKNWEASY HTGIASFSKV
Subjt:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV

XP_022158668.1 centromere protein V isoform X4 [Momordica charantia]1.2e-7597.78Show/hide
Query:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK
        MTSELVVHSG CHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGT TAKHTFCKVCGITSFYRPRSNPDGVAITFK
Subjt:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV
        CVDPGTLTHVEIRQFDGKNWEASY HTGIASFSKV
Subjt:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV

TrEMBL top hitse value%identityAlignment
A0A5D3CJK9 Centromere protein V isoform X14.8e-7088.15Show/hide
Query:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK
        M SELVVH+GGCHCKKVRWRV+APA VVAWDCNCSNCFMR NTHFIVP E F+LLGDS  F+STYTFG+HTAKHTFCK CGITSFYRPRSNPDGVAITFK
Subjt:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV
        CVDPGTLTHVE+RQFDG NWEASYDHTGIASFSK+
Subjt:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV

A0A6J1DWG7 centromere protein V isoform X15.9e-7697.78Show/hide
Query:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK
        MTSELVVHSG CHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGT TAKHTFCKVCGITSFYRPRSNPDGVAITFK
Subjt:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV
        CVDPGTLTHVEIRQFDGKNWEASY HTGIASFSKV
Subjt:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV

A0A6J1DWS0 centromere protein V isoform X45.9e-7697.78Show/hide
Query:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK
        MTSELVVHSG CHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGT TAKHTFCKVCGITSFYRPRSNPDGVAITFK
Subjt:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV
        CVDPGTLTHVEIRQFDGKNWEASY HTGIASFSKV
Subjt:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV

A0A6J1DXT6 centromere protein V isoform X35.9e-7697.78Show/hide
Query:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK
        MTSELVVHSG CHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGT TAKHTFCKVCGITSFYRPRSNPDGVAITFK
Subjt:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV
        CVDPGTLTHVEIRQFDGKNWEASY HTGIASFSKV
Subjt:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV

A0A6J1E1M0 centromere protein V isoform X25.9e-7697.78Show/hide
Query:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK
        MTSELVVHSG CHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGT TAKHTFCKVCGITSFYRPRSNPDGVAITFK
Subjt:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV
        CVDPGTLTHVEIRQFDGKNWEASY HTGIASFSKV
Subjt:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSKV

SwissProt top hitse value%identityAlignment
A0A0U1RR11 Centromere protein V-like protein 14.0e-2140.16Show/hide
Query:  LVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFKCVDP
        LV H+GGCHC  VR+ V APA +   DC+C  C  + + HF+VP+  F LL  +E  + TY   TH A H+FC  CG+ SF+   S+P    +   C+D 
Subjt:  LVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFKCVDP

Query:  GTLTHVEIRQFDG--KNWEASYDHTGI
        GT+  V I +  G     EA+ +H  I
Subjt:  GTLTHVEIRQFDG--KNWEASYDHTGI

A0A0U1RRI6 Centromere protein V-like protein 34.0e-2140.16Show/hide
Query:  LVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFKCVDP
        LV H+GGCHC  VR+ V APA +   DC+C  C  + + HF+VP+  F LL  +E  + TY   TH A H+FC  CG+ SF+   S+P    +   C+D 
Subjt:  LVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFKCVDP

Query:  GTLTHVEIRQFDG--KNWEASYDHTGI
        GT+  V I +  G     EA+ +H  I
Subjt:  GTLTHVEIRQFDG--KNWEASYDHTGI

P0DPI3 Centromere protein V-like protein 24.0e-2140.16Show/hide
Query:  LVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFKCVDP
        LV H+GGCHC  VR+ V APA +   DC+C  C  + + HF+VP+  F LL  +E  + TY   TH A H+FC  CG+ SF+   S+P    +   C+D 
Subjt:  LVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFKCVDP

Query:  GTLTHVEIRQFDG--KNWEASYDHTGI
        GT+  V I +  G     EA+ +H  I
Subjt:  GTLTHVEIRQFDG--KNWEASYDHTGI

Q7Z7K6 Centromere protein V4.5e-3351.15Show/hide
Query:  LVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFKCVDP
        LV H+GGCHC  VR+ V A A +  +DCNCS C  + N HFIVP+  F+LL  +E  I+TYTF TH A+HTFCK CG+ SFY PRSNP G  I   C+D 
Subjt:  LVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFKCVDP

Query:  GTLTHVEIRQFDGKNWE-ASYDHTGIASFSK
        GT+  +   +F+G +WE A  +H  I + SK
Subjt:  GTLTHVEIRQFDGKNWE-ASYDHTGIASFSK

Q9CXS4 Centromere protein V1.6e-3351.91Show/hide
Query:  LVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFKCVDP
        LV H+GGCHC  VR+ V A A +  +DCNCS C  + N HFIVP+  F+LL  +E  I+TYTF TH A+HTFCK CG+ SFY PRSNP G  I   C+D 
Subjt:  LVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFKCVDP

Query:  GTLTHVEIRQFDGKNWE-ASYDHTGIASFSK
        GT+  V   +F+G +WE A  +H  I + SK
Subjt:  GTLTHVEIRQFDGKNWE-ASYDHTGIASFSK

Arabidopsis top hitse value%identityAlignment
AT5G16940.1 carbon-sulfur lyases1.5e-6072.39Show/hide
Query:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK
        M SEL+ H GGCHC K++WRVKA   V+AW CNCS+C MRGN HFIVPS +FELL DS+ FI+TYTFGTHTAKHTFCKVCGITSFY PRSNPDGVA+T K
Subjt:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSK
        CV  GTL H+E++ +DG+NWE S+  TGIASFSK
Subjt:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSK

AT5G16940.2 carbon-sulfur lyases1.5e-6072.39Show/hide
Query:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK
        M SEL+ H GGCHC K++WRVKA   V+AW CNCS+C MRGN HFIVPS +FELL DS+ FI+TYTFGTHTAKHTFCKVCGITSFY PRSNPDGVA+T K
Subjt:  MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSK
        CV  GTL H+E++ +DG+NWE S+  TGIASFSK
Subjt:  CVDPGTLTHVEIRQFDGKNWEASYDHTGIASFSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCTGAGTTGGTTGTGCATAGTGGTGGATGCCACTGCAAGAAAGTAAGATGGCGAGTCAAAGCGCCTGCCAGAGTTGTAGCATGGGATTGCAACTGCTCTAATTG
CTTCATGAGGGGCAATACACATTTCATCGTTCCTTCGGAACATTTCGAGCTTTTAGGAGACTCCGAGAAATTTATTTCAACCTACACCTTTGGTACTCACACTGCAAAGC
ATACCTTCTGCAAAGTTTGTGGCATTACCTCGTTCTACCGTCCGCGCTCAAATCCAGATGGGGTTGCAATTACTTTCAAATGTGTTGATCCTGGAACTTTGACCCATGTG
GAGATTAGGCAGTTTGATGGAAAAAATTGGGAGGCCTCTTATGATCACACTGGCATTGCTTCATTCTCAAAGGTC
mRNA sequenceShow/hide mRNA sequence
ATGACTTCTGAGTTGGTTGTGCATAGTGGTGGATGCCACTGCAAGAAAGTAAGATGGCGAGTCAAAGCGCCTGCCAGAGTTGTAGCATGGGATTGCAACTGCTCTAATTG
CTTCATGAGGGGCAATACACATTTCATCGTTCCTTCGGAACATTTCGAGCTTTTAGGAGACTCCGAGAAATTTATTTCAACCTACACCTTTGGTACTCACACTGCAAAGC
ATACCTTCTGCAAAGTTTGTGGCATTACCTCGTTCTACCGTCCGCGCTCAAATCCAGATGGGGTTGCAATTACTTTCAAATGTGTTGATCCTGGAACTTTGACCCATGTG
GAGATTAGGCAGTTTGATGGAAAAAATTGGGAGGCCTCTTATGATCACACTGGCATTGCTTCATTCTCAAAGGTC
Protein sequenceShow/hide protein sequence
MTSELVVHSGGCHCKKVRWRVKAPARVVAWDCNCSNCFMRGNTHFIVPSEHFELLGDSEKFISTYTFGTHTAKHTFCKVCGITSFYRPRSNPDGVAITFKCVDPGTLTHV
EIRQFDGKNWEASYDHTGIASFSKV