; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS023120 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS023120
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein ELF4-LIKE
Genome locationscaffold78:295313..295654
RNA-Seq ExpressionMS023120
SyntenyMS023120
Gene Ontology termsGO:0009649 - entrainment of circadian clock (biological process)
GO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR009741 - Protein EARLY FLOWERING 4 domain
IPR040462 - Protein EARLY FLOWERING 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021961.1 Protein ELF4-LIKE 4 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4691.96Show/hide
Query:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL
        MEGDTFSG+GS AQID KILQ F KNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLS +FTRS+EVSSEGDSSGAL
Subjt:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL

Query:  KSDGKAGQKRNR
        KSDGKAGQKRNR
Subjt:  KSDGKAGQKRNR

XP_004144022.1 protein ELF4-LIKE 4 [Cucumis sativus]4.5e-4792.86Show/hide
Query:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL
        MEGDTFSGLGS  QID KILQ FQKNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLS +FTRS+EVSSEGDSSGAL
Subjt:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL

Query:  KSDGKAGQKRNR
        KSDGKAGQKRNR
Subjt:  KSDGKAGQKRNR

XP_022147541.1 protein ELF4-LIKE 4 [Momordica charantia]3.2e-53100Show/hide
Query:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL
        MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL

Query:  KSDGKAGQKRNRVV
        KSDGKAGQKRNRVV
Subjt:  KSDGKAGQKRNRVV

XP_022933909.1 protein ELF4-LIKE 4-like [Cucurbita moschata]2.6e-4791.23Show/hide
Query:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL
        MEGDTFSG+GS AQID KILQ F KNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLS +FTRS+EVSSEGDSSGAL
Subjt:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL

Query:  KSDGKAGQKRNRVV
        KSDGKAGQKRNR V
Subjt:  KSDGKAGQKRNRVV

XP_022961237.1 protein ELF4-LIKE 4-like [Cucurbita moschata]2.0e-4793.75Show/hide
Query:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL
        MEGDTFSGLGS AQID KILQ FQKNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLS +FTRS+EVSSEGDSSGAL
Subjt:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL

Query:  KSDGKAGQKRNR
        KSDGKAGQKRNR
Subjt:  KSDGKAGQKRNR

TrEMBL top hitse value%identityAlignment
A0A6J1D2P4 protein ELF4-LIKE 41.6e-53100Show/hide
Query:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL
        MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL
Subjt:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL

Query:  KSDGKAGQKRNRVV
        KSDGKAGQKRNRVV
Subjt:  KSDGKAGQKRNRVV

A0A6J1F126 protein ELF4-LIKE 4-like1.3e-4791.23Show/hide
Query:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL
        MEGDTFSG+GS AQID KILQ F KNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLS +FTRS+EVSSEGDSSGAL
Subjt:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL

Query:  KSDGKAGQKRNRVV
        KSDGKAGQKRNR V
Subjt:  KSDGKAGQKRNRVV

A0A6J1H9N1 protein ELF4-LIKE 4-like9.7e-4893.75Show/hide
Query:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL
        MEGDTFSGLGS AQID KILQ FQKNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLS +FTRS+EVSSEGDSSGAL
Subjt:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL

Query:  KSDGKAGQKRNR
        KSDGKAGQKRNR
Subjt:  KSDGKAGQKRNR

A0A6J1I047 protein ELF4-LIKE 4-like1.3e-4791.23Show/hide
Query:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL
        MEGDTFSG+GS AQID KILQ F KNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLS +FTRS+EVSSEGDSSGAL
Subjt:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL

Query:  KSDGKAGQKRNRVV
        KSDGKAGQKRNR V
Subjt:  KSDGKAGQKRNRVV

A0A6J1JGF0 protein ELF4-LIKE 4-like9.7e-4893.75Show/hide
Query:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL
        MEGDTFSGLGS AQID KILQ FQKNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLS +FTRS+EVSSEGDSSGAL
Subjt:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL

Query:  KSDGKAGQKRNR
        KSDGKAGQKRNR
Subjt:  KSDGKAGQKRNR

SwissProt top hitse value%identityAlignment
O04211 Protein EARLY FLOWERING 42.0e-1342.17Show/hide
Query:  DGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSG
        D  + +   +NF QVQS+LD+N+ LI ++N NH+S++ DN+++NV LI+ELN NI +VV++Y+DL+ +F+        G   G
Subjt:  DGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSG

O80877 Protein ELF4-LIKE 13.4e-1340Show/hide
Query:  EGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVE----VSSEGDSS
        E D      S A  D ++       F + Q  LDQN+ LI  +N+NH S+IPDN++RNVGLI E+N NI +V+++Y+DLS NF +  +     + +GD++
Subjt:  EGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVE----VSSEGDSS

Q570U6 Protein ELF4-LIKE 43.0e-3873.21Show/hide
Query:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL
        MEGD  SG G    +DGK+LQ FQK+FV VQ ILDQN+LLI+EINQNHESK PDNL RNVGLI+ELNNNIRRV  LY DLS++F RSV+ SSEG+SSG L
Subjt:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL

Query:  KSDGKAGQKRNR
        KSDGKA QKR R
Subjt:  KSDGKAGQKRNR

Q8S8F5 Protein ELF4-LIKE 32.6e-3476.53Show/hide
Query:  MEGDTFSG-LGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSS
        MEGDT S  +GSG Q+DGKILQ F+K+FVQVQ+ILD N+LLI+EINQNHESKIPDNL RNVGLIRELNNN+RRV  LY DLS NF++S+E SSEGDSS
Subjt:  MEGDTFSG-LGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSS

Q94BS8 Protein ELF4-LIKE 22.8e-3671.68Show/hide
Query:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL
        MEGD +SG G   Q+DGK+LQ FQK+FVQVQ ILDQN+LLI+EINQNHESK  D+L RNVGLIRELNNNIR V  LY DLS++F RSV+ SSEG+S+G L
Subjt:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL

Query:  KSDGKA-GQKRNR
        KSDGKA  QKR R
Subjt:  KSDGKA-GQKRNR

Arabidopsis top hitse value%identityAlignment
AT1G17455.1 ELF4-like 42.1e-3973.21Show/hide
Query:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL
        MEGD  SG G    +DGK+LQ FQK+FV VQ ILDQN+LLI+EINQNHESK PDNL RNVGLI+ELNNNIRRV  LY DLS++F RSV+ SSEG+SSG L
Subjt:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL

Query:  KSDGKAGQKRNR
        KSDGKA QKR R
Subjt:  KSDGKAGQKRNR

AT1G17455.2 ELF4-like 42.1e-3973.21Show/hide
Query:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL
        MEGD  SG G    +DGK+LQ FQK+FV VQ ILDQN+LLI+EINQNHESK PDNL RNVGLI+ELNNNIRRV  LY DLS++F RSV+ SSEG+SSG L
Subjt:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL

Query:  KSDGKAGQKRNR
        KSDGKA QKR R
Subjt:  KSDGKAGQKRNR

AT1G72630.1 ELF4-like 22.0e-3771.68Show/hide
Query:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL
        MEGD +SG G   Q+DGK+LQ FQK+FVQVQ ILDQN+LLI+EINQNHESK  D+L RNVGLIRELNNNIR V  LY DLS++F RSV+ SSEG+S+G L
Subjt:  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGAL

Query:  KSDGKA-GQKRNR
        KSDGKA  QKR R
Subjt:  KSDGKA-GQKRNR

AT2G06255.1 ELF4-like 31.9e-3576.53Show/hide
Query:  MEGDTFSG-LGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSS
        MEGDT S  +GSG Q+DGKILQ F+K+FVQVQ+ILD N+LLI+EINQNHESKIPDNL RNVGLIRELNNN+RRV  LY DLS NF++S+E SSEGDSS
Subjt:  MEGDTFSG-LGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSS

AT2G40080.1 Protein of unknown function (DUF1313)1.4e-1442.17Show/hide
Query:  DGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSG
        D  + +   +NF QVQS+LD+N+ LI ++N NH+S++ DN+++NV LI+ELN NI +VV++Y+DL+ +F+        G   G
Subjt:  DGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGTGACACATTTTCAGGGCTTGGCAGTGGTGCCCAGATTGATGGCAAGATTTTACAGAGATTTCAGAAGAATTTTGTTCAAGTCCAAAGCATATTGGATCAAAA
CAAGCTGCTCATCAGTGAAATAAACCAAAACCACGAGTCAAAGATCCCTGACAACCTCAACAGAAATGTGGGTCTGATCCGAGAACTAAACAACAATATCAGGAGGGTTG
TTGACTTATATGCTGATCTTTCATATAACTTCACCAGATCCGTGGAAGTTTCTTCAGAAGGCGATTCCAGTGGAGCTTTGAAGTCAGATGGAAAAGCAGGCCAGAAGAGA
AACAGGGTTGTT
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGTGACACATTTTCAGGGCTTGGCAGTGGTGCCCAGATTGATGGCAAGATTTTACAGAGATTTCAGAAGAATTTTGTTCAAGTCCAAAGCATATTGGATCAAAA
CAAGCTGCTCATCAGTGAAATAAACCAAAACCACGAGTCAAAGATCCCTGACAACCTCAACAGAAATGTGGGTCTGATCCGAGAACTAAACAACAATATCAGGAGGGTTG
TTGACTTATATGCTGATCTTTCATATAACTTCACCAGATCCGTGGAAGTTTCTTCAGAAGGCGATTCCAGTGGAGCTTTGAAGTCAGATGGAAAAGCAGGCCAGAAGAGA
AACAGGGTTGTT
Protein sequenceShow/hide protein sequence
MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKR
NRVV